RNA–Protein interactions for RNA: ENST00000590898.5

RPRD1A-209, Transcript of regulation of nuclear pre-mRNA domain containing 1A, humanhuman

TSL 1 (best) BASIC

Gene RPRD1A, Length 1,945 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPRD1A-209ENST00000590898 KLLNB2CW77 178 aa12.43□□□□□ -0.42
RPRD1A-209ENST00000590898 TCL1AP56279 114 aa12.43□□□□□ -0.42
RPRD1A-209ENST00000590898 KCNIP4Q6PIL6 250 aa12.43□□□□□ -0.42
RPRD1A-209ENST00000590898 C20orf144Q9BQM9 153 aa12.43□□□□□ -0.42
RPRD1A-209ENST00000590898 HUWE1Q7Z6Z7 4374 aaKnown RBP12.43□□□□□ -0.42
RPRD1A-209ENST00000590898 SPRY2O43597 315 aa12.43□□□□□ -0.42
RPRD1A-209ENST00000590898 DEFB135Q30KP9 77 aa12.43□□□□□ -0.42
RPRD1A-209ENST00000590898 FAM231DQ6ZW35 169 aa12.43□□□□□ -0.42
RPRD1A-209ENST00000590898 C19orf71A6NCJ1 209 aa12.42□□□□□ -0.42
RPRD1A-209ENST00000590898 CRIP1P50238 77 aa12.42□□□□□ -0.42
RPRD1A-209ENST00000590898 SAPCD1Q5SSQ6 148 aa12.42□□□□□ -0.42
RPRD1A-209ENST00000590898 ZFAND2AQ8N6M9 145 aa12.42□□□□□ -0.42
RPRD1A-209ENST00000590898 IMMP2LQ96T52 175 aa12.42□□□□□ -0.42
RPRD1A-209ENST00000590898 OVOL2Q9BRP0 275 aa12.42□□□□□ -0.42
RPRD1A-209ENST00000590898 NDFIP1Q9BT67 221 aa12.42□□□□□ -0.42
RPRD1A-209ENST00000590898 ZFP30Q9Y2G7 519 aa12.42□□□□□ -0.42
RPRD1A-209ENST00000590898 GATCO43716 136 aaKnown RBP12.41□□□□□ -0.42
RPRD1A-209ENST00000590898 INSP01308 110 aa12.41□□□□□ -0.42
RPRD1A-209ENST00000590898 GPX1P07203 203 aa12.41□□□□□ -0.42
RPRD1A-209ENST00000590898 TRGC2P03986 189 aa12.41□□□□□ -0.42
RPRD1A-209ENST00000590898 ZNF705AQ6ZN79 300 aaPredicted RBP12.41□□□□□ -0.42
RPRD1A-209ENST00000590898 GOLT1BQ9Y3E0 138 aa12.41□□□□□ -0.42
RPRD1A-209ENST00000590898 TENM3Q9P273 2699 aa12.4□□□□□ -0.42
RPRD1A-209ENST00000590898 TRAV12-2A0A075B6T6 113 aa12.4□□□□□ -0.42
RPRD1A-209ENST00000590898 SPINK4O60575 86 aa12.4□□□□□ -0.42
RPRD1A-209ENST00000590898 GFI1BQ5VTD9 330 aa12.4□□□□□ -0.42
RPRD1A-209ENST00000590898 TMEM256Q8N2U0 113 aa12.4□□□□□ -0.42
RPRD1A-209ENST00000590898 C1orf196B1AJZ1 125 aa12.39□□□□□ -0.43
RPRD1A-209ENST00000590898 KIR3DS1Q14943 382 aa12.39□□□□□ -0.43
RPRD1A-209ENST00000590898 C1orf158Q8N1D5 194 aa12.39□□□□□ -0.43
RPRD1A-209ENST00000590898 SMIM27A0A1W2PRY6 76 aa12.39□□□□□ -0.43
RPRD1A-209ENST00000590898 C7orf71A4D174 169 aa12.39□□□□□ -0.43
RPRD1A-209ENST00000590898 P01737 135 aa12.39□□□□□ -0.43
RPRD1A-209ENST00000590898 RPL19P84098 196 aaKnown RBP12.39□□□□□ -0.43
RPRD1A-209ENST00000590898 COX8CQ7Z4L0 72 aa12.39□□□□□ -0.43
RPRD1A-209ENST00000590898 NEU1Q99519 415 aa12.39□□□□□ -0.43
RPRD1A-209ENST00000590898 RPP21Q9H633 154 aaKnown RBP12.39□□□□□ -0.43
RPRD1A-209ENST00000590898 TGP01266 2768 aa12.38□□□□□ -0.43
RPRD1A-209ENST00000590898 ZNF324O75467 553 aaPredicted RBP12.38□□□□□ -0.43
RPRD1A-209ENST00000590898 ZNF80P51504 273 aaPredicted RBP12.38□□□□□ -0.43
RPRD1A-209ENST00000590898 OR11H2Q8NH07 326 aa12.38□□□□□ -0.43
RPRD1A-209ENST00000590898 SMIM9A6NGZ8 99 aa12.37□□□□□ -0.43
RPRD1A-209ENST00000590898 TYMSP04818 313 aa12.37□□□□□ -0.43
RPRD1A-209ENST00000590898 GZMBP10144 247 aa12.37□□□□□ -0.43
RPRD1A-209ENST00000590898 RNASE4P34096 147 aaKnown RBP12.37□□□□□ -0.43
RPRD1A-209ENST00000590898 Q6AWC8 147 aa12.37□□□□□ -0.43
RPRD1A-209ENST00000590898 DAZAP1Q96EP5 407 aaKnown RBP12.37□□□□□ -0.43
RPRD1A-209ENST00000590898 TRAV12-3A0A0B4J271 114 aa12.37□□□□□ -0.43
RPRD1A-209ENST00000590898 LOC105371267A0A1B0GV96 52 aa12.37□□□□□ -0.43
RPRD1A-209ENST00000590898 J3KRW8 73 aa12.37□□□□□ -0.43
RPRD1A-209ENST00000590898 PHOX2AO14813 284 aa12.37□□□□□ -0.43
RPRD1A-209ENST00000590898 SMUG1Q53HV7 270 aa12.37□□□□□ -0.43
RPRD1A-209ENST00000590898 TMEM208Q9BTX3 173 aa12.37□□□□□ -0.43
RPRD1A-209ENST00000590898 BIN3Q9NQY0 253 aa12.37□□□□□ -0.43
RPRD1A-209ENST00000590898 RBMY1A1P0DJD3 496 aaKnown RBP12.36□□□□□ -0.43
RPRD1A-209ENST00000590898 RBMY1CP0DJD4 496 aa12.36□□□□□ -0.43
RPRD1A-209ENST00000590898 RAB5BP61020 215 aa12.36□□□□□ -0.43
RPRD1A-209ENST00000590898 RBMY1FQ15415 496 aaKnown RBP12.36□□□□□ -0.43
RPRD1A-209ENST00000590898 PRR9Q5T870 116 aa12.36□□□□□ -0.43
RPRD1A-209ENST00000590898 GTSF1Q8WW33 167 aa12.36□□□□□ -0.43
RPRD1A-209ENST00000590898 RETNQ9HD89 108 aa12.36□□□□□ -0.43
RPRD1A-209ENST00000590898 SH2D1AO60880 128 aa12.35□□□□□ -0.43
RPRD1A-209ENST00000590898 OR2D3Q8NGH3 330 aa12.35□□□□□ -0.43
RPRD1A-209ENST00000590898 TSKUQ8WUA8 353 aa12.35□□□□□ -0.43
RPRD1A-209ENST00000590898 FRZBQ92765 325 aa12.35□□□□□ -0.43
RPRD1A-209ENST00000590898 LINC01587Q99440 93 aa12.35□□□□□ -0.43
RPRD1A-209ENST00000590898 X6R8D5 127 aa12.35□□□□□ -0.43
RPRD1A-209ENST00000590898 HIGD1CA8MV81 97 aa12.35□□□□□ -0.43
RPRD1A-209ENST00000590898 MIFP14174 115 aa12.35□□□□□ -0.43
RPRD1A-209ENST00000590898 MRPL54Q6P161 138 aaKnown RBP12.35□□□□□ -0.43
RPRD1A-209ENST00000590898 NUP35Q8NFH5 326 aa12.35□□□□□ -0.43
RPRD1A-209ENST00000590898 BTF3L4Q96K17 158 aa12.35□□□□□ -0.43
RPRD1A-209ENST00000590898 IGHV3OR16-12A0A075B7B8 117 aa12.34□□□□□ -0.43
RPRD1A-209ENST00000590898 TRAV21A0A0B4J279 112 aa12.34□□□□□ -0.43
RPRD1A-209ENST00000590898 Q6ZQT7 251 aa12.34□□□□□ -0.43
RPRD1A-209ENST00000590898 LINC00467Q9BRT7 94 aa12.34□□□□□ -0.43
RPRD1A-209ENST00000590898 FAM162BQ5T6X4 162 aa12.33□□□□□ -0.44
RPRD1A-209ENST00000590898 U3KQK5 164 aa12.33□□□□□ -0.44
RPRD1A-209ENST00000590898 STAB2Q8WWQ8 2551 aa12.33□□□□□ -0.44
RPRD1A-209ENST00000590898 TRAV9-1A0A075B6T8 112 aa12.33□□□□□ -0.44
RPRD1A-209ENST00000590898 TMSB15BA0A087X1C1 80 aa12.33□□□□□ -0.44
RPRD1A-209ENST00000590898 HIST1H2BKO60814 126 aa12.33□□□□□ -0.44
RPRD1A-209ENST00000590898 HIST1H2BJP06899 126 aa12.33□□□□□ -0.44
RPRD1A-209ENST00000590898 HIST1H2BOP23527 126 aa12.33□□□□□ -0.44
RPRD1A-209ENST00000590898 HIST1H2BBP33778 126 aa12.33□□□□□ -0.44
RPRD1A-209ENST00000590898 HIST1H2BDP58876 126 aa12.33□□□□□ -0.44
RPRD1A-209ENST00000590898 HIST1H2BCP62807 126 aa12.33□□□□□ -0.44
RPRD1A-209ENST00000590898 FABP9Q0Z7S8 132 aa12.33□□□□□ -0.44
RPRD1A-209ENST00000590898 HIST2H2BEQ16778 126 aa12.33□□□□□ -0.44
RPRD1A-209ENST00000590898 CT83Q5H943 113 aa12.33□□□□□ -0.44
RPRD1A-209ENST00000590898 HIST2H2BFQ5QNW6 126 aaPredicted RBP12.33□□□□□ -0.44
RPRD1A-209ENST00000590898 HIST1H2BHQ93079 126 aa12.33□□□□□ -0.44
RPRD1A-209ENST00000590898 HIST1H2BNQ99877 126 aa12.33□□□□□ -0.44
RPRD1A-209ENST00000590898 HIST1H2BMQ99879 126 aa12.33□□□□□ -0.44
RPRD1A-209ENST00000590898 FABP5P3A8MUU1 101 aa12.32□□□□□ -0.44
RPRD1A-209ENST00000590898 A8MWL6 223 aa12.32□□□□□ -0.44
RPRD1A-209ENST00000590898 TRGC1P0CF51 173 aa12.32□□□□□ -0.44
RPRD1A-209ENST00000590898 RRN3P1Q2M238 152 aa12.32□□□□□ -0.44
RPRD1A-209ENST00000590898 NAT8BQ9UHF3 227 aa12.32□□□□□ -0.44
RPRD1A-209ENST00000590898 Q8NAQ8 132 aa12.31□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 45.5 ms