RNA–Protein interactions for RNA: ENST00000590830.5

MBD3-208, Transcript of methyl-CpG binding domain protein 3, humanhuman

TSL 1 (best)

Gene MBD3, Length 1,035 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MBD3-208ENST00000590830 NDFIP1Q9BT67 221 aa15.54■□□□□ 0.08
MBD3-208ENST00000590830 TYMSP04818 313 aa15.53■□□□□ 0.08
MBD3-208ENST00000590830 Q6ZR54 194 aa15.53■□□□□ 0.08
MBD3-208ENST00000590830 TCTE3Q8IZS6 198 aa15.53■□□□□ 0.08
MBD3-208ENST00000590830 LINC00588Q9Y4M8 146 aa15.53■□□□□ 0.08
MBD3-208ENST00000590830 NACAE9PAV3 2078 aa15.52■□□□□ 0.08
MBD3-208ENST00000590830 H3BNG1 76 aa15.52■□□□□ 0.08
MBD3-208ENST00000590830 PEX7O00628 323 aa15.52■□□□□ 0.08
MBD3-208ENST00000590830 GCGP01275 180 aa15.52■□□□□ 0.08
MBD3-208ENST00000590830 LGALSLQ3ZCW2 172 aaPredicted RBP15.52■□□□□ 0.08
MBD3-208ENST00000590830 FAM213BQ8TBF2 198 aa15.52■□□□□ 0.08
MBD3-208ENST00000590830 RASL10AQ92737 203 aa15.52■□□□□ 0.08
MBD3-208ENST00000590830 SPXQ9BT56 116 aa15.52■□□□□ 0.08
MBD3-208ENST00000590830 FBLL1A6NHQ2 334 aaKnown RBP15.51■□□□□ 0.07
MBD3-208ENST00000590830 UMAD1C9J7I0 102 aa15.51■□□□□ 0.07
MBD3-208ENST00000590830 FHL2Q14192 279 aa15.51■□□□□ 0.07
MBD3-208ENST00000590830 ZNRF2Q8NHG8 242 aa15.51■□□□□ 0.07
MBD3-208ENST00000590830 STOML3Q8TAV4 291 aa15.51■□□□□ 0.07
MBD3-208ENST00000590830 NKX6-2Q9C056 277 aaPredicted RBP15.51■□□□□ 0.07
MBD3-208ENST00000590830 PFDN1O60925 122 aa15.5■□□□□ 0.07
MBD3-208ENST00000590830 FAM3BP58499 235 aaPredicted RBP15.5■□□□□ 0.07
MBD3-208ENST00000590830 SMUG1Q53HV7 270 aa15.5■□□□□ 0.07
MBD3-208ENST00000590830 SAPCD1Q5SSQ6 148 aa15.5■□□□□ 0.07
MBD3-208ENST00000590830 SFT2D1Q8WV19 159 aa15.5■□□□□ 0.07
MBD3-208ENST00000590830 SDF2L1Q9HCN8 221 aa15.5■□□□□ 0.07
MBD3-208ENST00000590830 ARL2-SNX15V9GYD0 113 aa15.5■□□□□ 0.07
MBD3-208ENST00000590830 MUC4Q99102 2169 aa15.5■□□□□ 0.07
MBD3-208ENST00000590830 PFN1P07737 140 aaKnown RBP15.49■□□□□ 0.07
MBD3-208ENST00000590830 CCL18P55774 89 aa15.49■□□□□ 0.07
MBD3-208ENST00000590830 ESRGQ1W209 222 aa15.49■□□□□ 0.07
MBD3-208ENST00000590830 HIST1H2BAQ96A08 127 aa15.49■□□□□ 0.07
MBD3-208ENST00000590830 KCNS1Q96KK3 526 aa15.49■□□□□ 0.07
MBD3-208ENST00000590830 A0A096LPF7 62 aa15.48■□□□□ 0.07
MBD3-208ENST00000590830 A0A1B0GV50 99 aa15.48■□□□□ 0.07
MBD3-208ENST00000590830 EIF5AP63241 154 aaKnown RBP15.48■□□□□ 0.07
MBD3-208ENST00000590830 ZNF479Q96JC4 524 aa15.48■□□□□ 0.07
MBD3-208ENST00000590830 HECTD4Q9Y4D8 3996 aa15.48■□□□□ 0.07
MBD3-208ENST00000590830 RTL8CO15255 209 aa15.47■□□□□ 0.07
MBD3-208ENST00000590830 PAGE4O60829 102 aa15.47■□□□□ 0.07
MBD3-208ENST00000590830 SFTA3P0C7M3 94 aa15.47■□□□□ 0.07
MBD3-208ENST00000590830 TPT1P13693 172 aaKnown RBP15.47■□□□□ 0.07
MBD3-208ENST00000590830 CST9LP1Q5W188 147 aa15.47■□□□□ 0.07
MBD3-208ENST00000590830 Q86TA4 180 aa15.47■□□□□ 0.07
MBD3-208ENST00000590830 M0R2P5 195 aa15.46■□□□□ 0.07
MBD3-208ENST00000590830 PAX4O43316 350 aa15.46■□□□□ 0.07
MBD3-208ENST00000590830 CRIP1P50238 77 aa15.46■□□□□ 0.07
MBD3-208ENST00000590830 PPT1P50897 306 aa15.46■□□□□ 0.07
MBD3-208ENST00000590830 CRYBA4P53673 196 aa15.46■□□□□ 0.07
MBD3-208ENST00000590830 DPPA3Q6W0C5 159 aa15.46■□□□□ 0.07
MBD3-208ENST00000590830 HHLA3Q9XRX5 114 aa15.46■□□□□ 0.07
MBD3-208ENST00000590830 C1QBP02746 253 aa15.45■□□□□ 0.06
MBD3-208ENST00000590830 ZFP69Q49AA0 526 aa15.45■□□□□ 0.06
MBD3-208ENST00000590830 PRO0255Q9UI72 69 aa15.45■□□□□ 0.06
MBD3-208ENST00000590830 hCG_2014768A0A024R1R8 64 aa15.44■□□□□ 0.06
MBD3-208ENST00000590830 IGKV3D-20A0A0C4DH25 116 aa15.44■□□□□ 0.06
MBD3-208ENST00000590830 H2AFB1P0C5Y9 115 aa15.44■□□□□ 0.06
MBD3-208ENST00000590830 CCL20P78556 96 aa15.44■□□□□ 0.06
MBD3-208ENST00000590830 COX8CQ7Z4L0 72 aa15.43■□□□□ 0.06
MBD3-208ENST00000590830 ZC2HC1AQ96GY0 325 aa15.43■□□□□ 0.06
MBD3-208ENST00000590830 C9orf85Q96MD7 179 aa15.43■□□□□ 0.06
MBD3-208ENST00000590830 TRGV4A0A0C4DH28 118 aa15.42■□□□□ 0.06
MBD3-208ENST00000590830 TRBV6-1A0A0K0K1D8 114 aa15.42■□□□□ 0.06
MBD3-208ENST00000590830 FABP5P3A8MUU1 101 aa15.42■□□□□ 0.06
MBD3-208ENST00000590830 RNASE3P12724 160 aaKnown RBP15.42■□□□□ 0.06
MBD3-208ENST00000590830 SLAQ13239 276 aa15.42■□□□□ 0.06
MBD3-208ENST00000590830 FMC1Q96HJ9 113 aa15.42■□□□□ 0.06
MBD3-208ENST00000590830 TCEAL7Q9BRU2 100 aa15.42■□□□□ 0.06
MBD3-208ENST00000590830 ZFP30Q9Y2G7 519 aa15.42■□□□□ 0.06
MBD3-208ENST00000590830 TRAV4A0A0B4J268 109 aa15.41■□□□□ 0.06
MBD3-208ENST00000590830 NBDYA0A0U1RRE5 68 aa15.41■□□□□ 0.06
MBD3-208ENST00000590830 ZNF575Q86XF7 245 aa15.41■□□□□ 0.06
MBD3-208ENST00000590830 OR4C5Q8NGB2 326 aa15.41■□□□□ 0.06
MBD3-208ENST00000590830 Q9H8V8 135 aa15.41■□□□□ 0.06
MBD3-208ENST00000590830 C9JCJ5 164 aa15.4■□□□□ 0.06
MBD3-208ENST00000590830 ZNF876PQ49A33 203 aa15.4■□□□□ 0.06
MBD3-208ENST00000590830 LINC00336Q6ZUF6 198 aa15.4■□□□□ 0.06
MBD3-208ENST00000590830 UPK3BQ9BT76 320 aa15.4■□□□□ 0.06
MBD3-208ENST00000590830 MRPS16Q9Y3D3 137 aaKnown RBP15.4■□□□□ 0.06
MBD3-208ENST00000590830 ICOSQ9Y6W8 199 aa15.4■□□□□ 0.06
MBD3-208ENST00000590830 PKD1P98161 4303 aa15.39■□□□□ 0.05
MBD3-208ENST00000590830 PGPEP1LA6NFU8 196 aa15.39■□□□□ 0.05
MBD3-208ENST00000590830 LTAP01374 205 aa15.39■□□□□ 0.05
MBD3-208ENST00000590830 UBE2G1P62253 170 aa15.39■□□□□ 0.05
MBD3-208ENST00000590830 AKAP14Q86UN6 197 aa15.39■□□□□ 0.05
MBD3-208ENST00000590830 TRAV1-1A0A0B4J248 108 aa15.38■□□□□ 0.05
MBD3-208ENST00000590830 A0A1B0GVY2 172 aa15.38■□□□□ 0.05
MBD3-208ENST00000590830 SCO2A0A1W2PP80 73 aa15.38■□□□□ 0.05
MBD3-208ENST00000590830 SH2D1AO60880 128 aa15.38■□□□□ 0.05
MBD3-208ENST00000590830 PTH2Q96A98 100 aa15.38■□□□□ 0.05
MBD3-208ENST00000590830 KRBOX1C9JBD0 128 aa15.37■□□□□ 0.05
MBD3-208ENST00000590830 RS1O15537 224 aa15.37■□□□□ 0.05
MBD3-208ENST00000590830 ORM1P02763 201 aa15.37■□□□□ 0.05
MBD3-208ENST00000590830 AKR1C3P42330 323 aa15.37■□□□□ 0.05
MBD3-208ENST00000590830 SULT1A2P50226 295 aa15.37■□□□□ 0.05
MBD3-208ENST00000590830 RAB5CP51148 216 aa15.37■□□□□ 0.05
MBD3-208ENST00000590830 C1orf134Q5TEV5 83 aa15.37■□□□□ 0.05
MBD3-208ENST00000590830 SLC51BQ86UW2 128 aa15.37■□□□□ 0.05
MBD3-208ENST00000590830 C9orf62Q8N4C0 152 aa15.37■□□□□ 0.05
MBD3-208ENST00000590830 PRSS29PA6NIE9 313 aa15.36■□□□□ 0.05
MBD3-208ENST00000590830 K7EQD1 137 aa15.36■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms