RNA–Protein interactions for RNA: ENST00000590407.1

PDE4A-207, Transcript of phosphodiesterase 4A, humanhuman

TSL 1 (best)

Gene PDE4A, Length 1,770 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDE4A-207ENST00000590407 NAA38Q9BRA0 125 aaKnown RBP9.42□□□□□ -0.9
PDE4A-207ENST00000590407 KALRNO60229 2985 aa9.42□□□□□ -0.9
PDE4A-207ENST00000590407 WNK2Q9Y3S1 2297 aa9.42□□□□□ -0.9
PDE4A-207ENST00000590407 DMXL2Q8TDJ6 3036 aa9.42□□□□□ -0.9
PDE4A-207ENST00000590407 A0A1B0GWB2 263 aa9.42□□□□□ -0.9
PDE4A-207ENST00000590407 A0A1W2PPR1 153 aa9.42□□□□□ -0.9
PDE4A-207ENST00000590407 LINC01549A6NIU2 74 aa9.42□□□□□ -0.9
PDE4A-207ENST00000590407 NDUFA4O00483 81 aa9.42□□□□□ -0.9
PDE4A-207ENST00000590407 SUMO2P61956 95 aaKnown RBP9.42□□□□□ -0.9
PDE4A-207ENST00000590407 RPL32P62910 135 aaKnown RBP9.42□□□□□ -0.9
PDE4A-207ENST00000590407 DPH3P1Q9H4G8 78 aa9.42□□□□□ -0.9
PDE4A-207ENST00000590407 ATMQ13315 3056 aa9.41□□□□□ -0.9
PDE4A-207ENST00000590407 H3BVH4 76 aa9.41□□□□□ -0.9
PDE4A-207ENST00000590407 PRR9Q5T870 116 aa9.41□□□□□ -0.9
PDE4A-207ENST00000590407 MAPKAPK5-AS1Q8N8E1 139 aa9.41□□□□□ -0.9
PDE4A-207ENST00000590407 C20orf173Q96LM9 149 aa9.41□□□□□ -0.9
PDE4A-207ENST00000590407 TTTY13Q9BZ97 58 aa9.41□□□□□ -0.9
PDE4A-207ENST00000590407 TRBV7-3A0A075B6L6 115 aa9.4□□□□□ -0.9
PDE4A-207ENST00000590407 TRAV26-2A0A0B4J265 109 aa9.4□□□□□ -0.9
PDE4A-207ENST00000590407 NXPH4O95158 308 aa9.4□□□□□ -0.9
PDE4A-207ENST00000590407 IGF1P05019 195 aa9.4□□□□□ -0.9
PDE4A-207ENST00000590407 TM4SF20Q53R12 229 aa9.4□□□□□ -0.9
PDE4A-207ENST00000590407 GPHB5Q86YW7 130 aa9.4□□□□□ -0.9
PDE4A-207ENST00000590407 NEXN-AS1Q8NBZ9 246 aa9.4□□□□□ -0.9
PDE4A-207ENST00000590407 OR10J6PQ8NGY7 276 aa9.4□□□□□ -0.9
PDE4A-207ENST00000590407 RASL10AQ92737 203 aa9.4□□□□□ -0.9
PDE4A-207ENST00000590407 ZFHX2Q9C0A1 2572 aaPredicted RBP9.4□□□□□ -0.91
PDE4A-207ENST00000590407 IGHV3OR16-13A0A075B7E8 117 aa9.4□□□□□ -0.91
PDE4A-207ENST00000590407 IGHV3-74A0A0B4J1X5 117 aa9.4□□□□□ -0.91
PDE4A-207ENST00000590407 IGLL5B9A064 214 aa9.4□□□□□ -0.91
PDE4A-207ENST00000590407 ZNF207O43670 478 aaKnown RBP9.4□□□□□ -0.91
PDE4A-207ENST00000590407 ARL3P36405 182 aa9.4□□□□□ -0.91
PDE4A-207ENST00000590407 ASIPP42127 132 aa9.4□□□□□ -0.91
PDE4A-207ENST00000590407 FOXI2Q6ZQN5 318 aa9.4□□□□□ -0.91
PDE4A-207ENST00000590407 USMG5Q96IX5 58 aa9.4□□□□□ -0.91
PDE4A-207ENST00000590407 NHP2Q9NX24 153 aaKnown RBP9.4□□□□□ -0.91
PDE4A-207ENST00000590407 CHTOPQ9Y3Y2 248 aaKnown RBP9.4□□□□□ -0.91
PDE4A-207ENST00000590407 IGHV3-49A0A0A0MS15 119 aa9.39□□□□□ -0.91
PDE4A-207ENST00000590407 F8W1H4 67 aa9.39□□□□□ -0.91
PDE4A-207ENST00000590407 C12orf74Q32Q52 190 aa9.39□□□□□ -0.91
PDE4A-207ENST00000590407 SCGB3A1Q96QR1 104 aa9.39□□□□□ -0.91
PDE4A-207ENST00000590407 MYMXA0A1B0GTQ4 84 aa9.38□□□□□ -0.91
PDE4A-207ENST00000590407 OR11H12B2RN74 326 aa9.38□□□□□ -0.91
PDE4A-207ENST00000590407 RNF223E7ERA6 249 aa9.38□□□□□ -0.91
PDE4A-207ENST00000590407 OR11H1Q8NG94 326 aa9.38□□□□□ -0.91
PDE4A-207ENST00000590407 OR11H2Q8NH07 326 aa9.38□□□□□ -0.91
PDE4A-207ENST00000590407 SPOCK3Q9BQ16 436 aa9.38□□□□□ -0.91
PDE4A-207ENST00000590407 BPESC1Q9GZL8 116 aa9.38□□□□□ -0.91
PDE4A-207ENST00000590407 PTPRZ1P23471 2315 aaPredicted RBP9.38□□□□□ -0.91
PDE4A-207ENST00000590407 LAMA5O15230 3695 aa9.38□□□□□ -0.91
PDE4A-207ENST00000590407 IGHV1-69DA0A0B4J2H0 117 aa9.37□□□□□ -0.91
PDE4A-207ENST00000590407 K7ERJ3 54 aa9.37□□□□□ -0.91
PDE4A-207ENST00000590407 Q6ZQT7 251 aa9.37□□□□□ -0.91
PDE4A-207ENST00000590407 IGHV4OR15-8A0A075B7B6 117 aa9.37□□□□□ -0.91
PDE4A-207ENST00000590407 A0A087WW49 117 aa9.37□□□□□ -0.91
PDE4A-207ENST00000590407 IGHV1-69P01742 117 aa9.37□□□□□ -0.91
PDE4A-207ENST00000590407 SAMD13Q5VXD3 122 aa9.37□□□□□ -0.91
PDE4A-207ENST00000590407 ZNF479Q96JC4 524 aa9.37□□□□□ -0.91
PDE4A-207ENST00000590407 S100A4P26447 101 aaKnown RBP9.36□□□□□ -0.91
PDE4A-207ENST00000590407 RRN3P1Q2M238 152 aa9.36□□□□□ -0.91
PDE4A-207ENST00000590407 BAALCQ8WXS3 180 aa9.36□□□□□ -0.91
PDE4A-207ENST00000590407 HIST1H4GQ99525 98 aa9.36□□□□□ -0.91
PDE4A-207ENST00000590407 UBTD1Q9HAC8 227 aa9.36□□□□□ -0.91
PDE4A-207ENST00000590407 PHLDA3Q9Y5J5 127 aa9.36□□□□□ -0.91
PDE4A-207ENST00000590407 IGHG2P01859 326 aa9.35□□□□□ -0.91
PDE4A-207ENST00000590407 ANXA2RQ3ZCQ2 193 aa9.35□□□□□ -0.91
PDE4A-207ENST00000590407 PAPPA-AS1Q5QFB9 102 aa9.35□□□□□ -0.91
PDE4A-207ENST00000590407 C2orf66Q6UXQ4 117 aa9.35□□□□□ -0.91
PDE4A-207ENST00000590407 UNQ9165/PRO28630Q6UXU0 137 aa9.35□□□□□ -0.91
PDE4A-207ENST00000590407 RNASE3P12724 160 aaKnown RBP9.35□□□□□ -0.91
PDE4A-207ENST00000590407 RIPPLY3P57055 190 aa9.35□□□□□ -0.91
PDE4A-207ENST00000590407 KIF25-AS1Q9Y6Z4 181 aa9.35□□□□□ -0.91
PDE4A-207ENST00000590407 MUC6Q6W4X9 2439 aa9.34□□□□□ -0.91
PDE4A-207ENST00000590407 TEX48A0A1B0GUV7 120 aa9.34□□□□□ -0.91
PDE4A-207ENST00000590407 LGALS1P09382 135 aaKnown RBP9.34□□□□□ -0.91
PDE4A-207ENST00000590407 TMEM219Q86XT9 240 aa9.34□□□□□ -0.91
PDE4A-207ENST00000590407 C14orf178Q8N769 122 aaPredicted RBP9.34□□□□□ -0.91
PDE4A-207ENST00000590407 RPL39LQ96EH5 51 aaKnown RBP9.34□□□□□ -0.91
PDE4A-207ENST00000590407 SPANXB1Q9NS25 103 aaPredicted RBP9.34□□□□□ -0.91
PDE4A-207ENST00000590407 ZNF580Q9UK33 172 aa9.34□□□□□ -0.91
PDE4A-207ENST00000590407 RAXQ9Y2V3 346 aa9.34□□□□□ -0.91
PDE4A-207ENST00000590407 SPTA1P02549 2419 aa9.33□□□□□ -0.92
PDE4A-207ENST00000590407 TMEM238LA0A1B0GVL6 79 aa9.33□□□□□ -0.92
PDE4A-207ENST00000590407 PRSS29PA6NIE9 313 aa9.33□□□□□ -0.92
PDE4A-207ENST00000590407 A6NJY4 79 aa9.33□□□□□ -0.92
PDE4A-207ENST00000590407 KLLNB2CW77 178 aa9.33□□□□□ -0.92
PDE4A-207ENST00000590407 J3QR89 54 aa9.33□□□□□ -0.92
PDE4A-207ENST00000590407 SCGB1A1P11684 91 aa9.33□□□□□ -0.92
PDE4A-207ENST00000590407 COX6B1P14854 86 aa9.33□□□□□ -0.92
PDE4A-207ENST00000590407 LINC00315P59091 139 aa9.33□□□□□ -0.92
PDE4A-207ENST00000590407 TACC2O95359 2948 aa9.33□□□□□ -0.92
PDE4A-207ENST00000590407 A6NDX4 124 aa9.32□□□□□ -0.92
PDE4A-207ENST00000590407 K7EMT4 169 aa9.32□□□□□ -0.92
PDE4A-207ENST00000590407 TRBV12-3P01733 135 aa9.32□□□□□ -0.92
PDE4A-207ENST00000590407 RPL24P83731 157 aaKnown RBP9.32□□□□□ -0.92
PDE4A-207ENST00000590407 PRADC1Q9BSG0 188 aa9.32□□□□□ -0.92
PDE4A-207ENST00000590407 CYSLTR1Q9Y271 337 aa9.32□□□□□ -0.92
PDE4A-207ENST00000590407 DCHS2Q6V1P9 2916 aa9.32□□□□□ -0.92
PDE4A-207ENST00000590407 HRNRQ86YZ3 2850 aaPredicted RBP9.32□□□□□ -0.92
PDE4A-207ENST00000590407 TMEM238C9JI98 176 aa9.32□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 58.5 ms