RNA–Protein interactions for RNA: ENST00000590180.1

TPM4-212, Transcript of tropomyosin 4, humanhuman

TSL 3

Gene TPM4, Length 521 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM4-212ENST00000590180 TDRG1Q3Y452 100 aa8.4□□□□□ -1.06
TPM4-212ENST00000590180 SMUG1Q53HV7 270 aa8.4□□□□□ -1.06
TPM4-212ENST00000590180 SOHLH1Q5JUK2 328 aa8.4□□□□□ -1.06
TPM4-212ENST00000590180 SAPCD1Q5SSQ6 148 aa8.4□□□□□ -1.06
TPM4-212ENST00000590180 Q6ZR54 194 aa8.4□□□□□ -1.06
TPM4-212ENST00000590180 TMEM75Q8N9X5 138 aa8.4□□□□□ -1.06
TPM4-212ENST00000590180 ZNRF2Q8NHG8 242 aa8.4□□□□□ -1.06
TPM4-212ENST00000590180 VSIG2Q96IQ7 327 aa8.4□□□□□ -1.06
TPM4-212ENST00000590180 NKX6-2Q9C056 277 aaPredicted RBP8.4□□□□□ -1.06
TPM4-212ENST00000590180 HHLA3Q9XRX5 114 aa8.4□□□□□ -1.06
TPM4-212ENST00000590180 DNAH10Q8IVF4 4471 aa8.4□□□□□ -1.07
TPM4-212ENST00000590180 IGHV3-16A0A0C4DH30 117 aa8.39□□□□□ -1.07
TPM4-212ENST00000590180 FAM74A7A6NL05 159 aa8.39□□□□□ -1.07
TPM4-212ENST00000590180 M0R2P5 195 aa8.39□□□□□ -1.07
TPM4-212ENST00000590180 BCL2L11O43521 198 aa8.39□□□□□ -1.07
TPM4-212ENST00000590180 PFDN1O60925 122 aa8.39□□□□□ -1.07
TPM4-212ENST00000590180 TYMSP04818 313 aa8.39□□□□□ -1.07
TPM4-212ENST00000590180 SFTA3P0C7M3 94 aa8.39□□□□□ -1.07
TPM4-212ENST00000590180 SEC11BP0C7V7 166 aa8.39□□□□□ -1.07
TPM4-212ENST00000590180 FHITP49789 147 aa8.39□□□□□ -1.07
TPM4-212ENST00000590180 EIF5AP63241 154 aaKnown RBP8.39□□□□□ -1.07
TPM4-212ENST00000590180 SLAQ13239 276 aa8.39□□□□□ -1.07
TPM4-212ENST00000590180 FHL2Q14192 279 aa8.39□□□□□ -1.07
TPM4-212ENST00000590180 C1orf134Q5TEV5 83 aa8.39□□□□□ -1.07
TPM4-212ENST00000590180 CST9LP1Q5W188 147 aa8.39□□□□□ -1.07
TPM4-212ENST00000590180 TMUB2Q71RG4 321 aa8.39□□□□□ -1.07
TPM4-212ENST00000590180 RASL10AQ92737 203 aa8.39□□□□□ -1.07
TPM4-212ENST00000590180 Q9H8V8 135 aa8.39□□□□□ -1.07
TPM4-212ENST00000590180 PRO0255Q9UI72 69 aa8.39□□□□□ -1.07
TPM4-212ENST00000590180 DNAH6Q9C0G6 4158 aa8.39□□□□□ -1.07
TPM4-212ENST00000590180 A0A096LPF7 62 aa8.38□□□□□ -1.07
TPM4-212ENST00000590180 NBDYA0A0U1RRE5 68 aa8.38□□□□□ -1.07
TPM4-212ENST00000590180 A0A1B0GV50 99 aa8.38□□□□□ -1.07
TPM4-212ENST00000590180 PRSS29PA6NIE9 313 aa8.38□□□□□ -1.07
TPM4-212ENST00000590180 C9JCJ5 164 aa8.38□□□□□ -1.07
TPM4-212ENST00000590180 PEX7O00628 323 aa8.38□□□□□ -1.07
TPM4-212ENST00000590180 RTL8CO15255 209 aa8.38□□□□□ -1.07
TPM4-212ENST00000590180 PFN1P07737 140 aaKnown RBP8.38□□□□□ -1.07
TPM4-212ENST00000590180 OR4C5Q8NGB2 326 aa8.38□□□□□ -1.07
TPM4-212ENST00000590180 FAM213BQ8TBF2 198 aa8.38□□□□□ -1.07
TPM4-212ENST00000590180 SFT2D1Q8WV19 159 aa8.38□□□□□ -1.07
TPM4-212ENST00000590180 HIST1H2BAQ96A08 127 aa8.38□□□□□ -1.07
TPM4-212ENST00000590180 ZNF479Q96JC4 524 aa8.38□□□□□ -1.07
TPM4-212ENST00000590180 ICOSQ9Y6W8 199 aa8.38□□□□□ -1.07
TPM4-212ENST00000590180 BIRC6Q9NR09 4857 aa8.38□□□□□ -1.07
TPM4-212ENST00000590180 UMAD1C9J7I0 102 aa8.37□□□□□ -1.07
TPM4-212ENST00000590180 CRYBA4P53673 196 aa8.37□□□□□ -1.07
TPM4-212ENST00000590180 C11orf21Q9P2W6 132 aa8.37□□□□□ -1.07
TPM4-212ENST00000590180 ARL2-SNX15V9GYD0 113 aa8.37□□□□□ -1.07
TPM4-212ENST00000590180 FABP5P3A8MUU1 101 aa8.36□□□□□ -1.07
TPM4-212ENST00000590180 PAGE4O60829 102 aa8.36□□□□□ -1.07
TPM4-212ENST00000590180 MRPL23Q16540 153 aaKnown RBP8.36□□□□□ -1.07
TPM4-212ENST00000590180 MBD3L1Q8WWY6 194 aa8.36□□□□□ -1.07
TPM4-212ENST00000590180 TRAV4A0A0B4J268 109 aa8.35□□□□□ -1.07
TPM4-212ENST00000590180 ORM1P02763 201 aa8.35□□□□□ -1.07
TPM4-212ENST00000590180 H2AFB1P0C5Y9 115 aa8.35□□□□□ -1.07
TPM4-212ENST00000590180 TPT1P13693 172 aaKnown RBP8.35□□□□□ -1.07
TPM4-212ENST00000590180 S100A4P26447 101 aaKnown RBP8.35□□□□□ -1.07
TPM4-212ENST00000590180 UBE2G1P62253 170 aa8.35□□□□□ -1.07
TPM4-212ENST00000590180 ZNF876PQ49A33 203 aa8.35□□□□□ -1.07
TPM4-212ENST00000590180 PCNPQ8WW12 178 aaKnown RBP8.35□□□□□ -1.07
TPM4-212ENST00000590180 ZFP30Q9Y2G7 519 aa8.35□□□□□ -1.07
TPM4-212ENST00000590180 MRPS16Q9Y3D3 137 aaKnown RBP8.35□□□□□ -1.07
TPM4-212ENST00000590180 FRAS1Q86XX4 4008 aa8.34□□□□□ -1.07
TPM4-212ENST00000590180 GYPEP15421 78 aa8.34□□□□□ -1.07
TPM4-212ENST00000590180 DPPA3Q6W0C5 159 aa8.34□□□□□ -1.07
TPM4-212ENST00000590180 Q6ZNX1 250 aa8.34□□□□□ -1.07
TPM4-212ENST00000590180 NEGR1Q7Z3B1 354 aa8.34□□□□□ -1.07
TPM4-212ENST00000590180 Q86TA4 180 aa8.34□□□□□ -1.07
TPM4-212ENST00000590180 IGKV3D-20A0A0C4DH25 116 aa8.33□□□□□ -1.08
TPM4-212ENST00000590180 SRIP30626 198 aa8.33□□□□□ -1.08
TPM4-212ENST00000590180 AKR1C3P42330 323 aa8.33□□□□□ -1.08
TPM4-212ENST00000590180 LGALSLQ3ZCW2 172 aaPredicted RBP8.33□□□□□ -1.08
TPM4-212ENST00000590180 EIF5AL1Q6IS14 154 aaKnown RBP8.33□□□□□ -1.08
TPM4-212ENST00000590180 LYPD5Q6UWN5 251 aa8.33□□□□□ -1.08
TPM4-212ENST00000590180 C6orf223Q8N319 242 aa8.33□□□□□ -1.08
TPM4-212ENST00000590180 FMC1Q96HJ9 113 aa8.33□□□□□ -1.08
TPM4-212ENST00000590180 TCEAL7Q9BRU2 100 aa8.33□□□□□ -1.08
TPM4-212ENST00000590180 UPK3BQ9BT76 320 aa8.33□□□□□ -1.08
TPM4-212ENST00000590180 hCG_2014768A0A024R1R8 64 aa8.32□□□□□ -1.08
TPM4-212ENST00000590180 IGHV3-73A0A0B4J1V6 119 aa8.32□□□□□ -1.08
TPM4-212ENST00000590180 PGPEP1LA6NFU8 196 aa8.32□□□□□ -1.08
TPM4-212ENST00000590180 B4DEV8 164 aa8.32□□□□□ -1.08
TPM4-212ENST00000590180 K7EQD1 137 aa8.32□□□□□ -1.08
TPM4-212ENST00000590180 TCTE3Q8IZS6 198 aa8.32□□□□□ -1.08
TPM4-212ENST00000590180 ZC2HC1AQ96GY0 325 aa8.32□□□□□ -1.08
TPM4-212ENST00000590180 C9orf85Q96MD7 179 aa8.32□□□□□ -1.08
TPM4-212ENST00000590180 M0R036 132 aa8.31□□□□□ -1.08
TPM4-212ENST00000590180 SIVA1O15304 175 aa8.31□□□□□ -1.08
TPM4-212ENST00000590180 RS1O15537 224 aa8.31□□□□□ -1.08
TPM4-212ENST00000590180 SH2D1AO60880 128 aa8.31□□□□□ -1.08
TPM4-212ENST00000590180 NXPH4O95158 308 aa8.31□□□□□ -1.08
TPM4-212ENST00000590180 RNASE3P12724 160 aaKnown RBP8.31□□□□□ -1.08
TPM4-212ENST00000590180 ASIPP42127 132 aa8.31□□□□□ -1.08
TPM4-212ENST00000590180 CRIP1P50238 77 aa8.31□□□□□ -1.08
TPM4-212ENST00000590180 TTC32Q5I0X7 151 aa8.31□□□□□ -1.08
TPM4-212ENST00000590180 FAM162BQ5T6X4 162 aa8.31□□□□□ -1.08
TPM4-212ENST00000590180 CFAP126Q5VTH2 177 aa8.31□□□□□ -1.08
TPM4-212ENST00000590180 TMSB15BA0A087X1C1 80 aa8.3□□□□□ -1.08
TPM4-212ENST00000590180 TRBV6-1A0A0K0K1D8 114 aa8.3□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 50.6 ms