RNA–Protein interactions for RNA: ENST00000589857.1

ZNF540-208, Transcript of zinc finger protein 540, humanhuman

TSL 4

Gene ZNF540, Length 575 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF540-208ENST00000589857 OR4X2Q8NGF9 303 aa8.12□□□□□ -1.11
ZNF540-208ENST00000589857 AGPAT4-IT1Q9H0P7 198 aa8.12□□□□□ -1.11
ZNF540-208ENST00000589857 UFC1Q9Y3C8 167 aa8.12□□□□□ -1.11
ZNF540-208ENST00000589857 IGHV3OR16-8A0A075B7F1 116 aa8.11□□□□□ -1.11
ZNF540-208ENST00000589857 TRAV21A0A0B4J279 112 aa8.11□□□□□ -1.11
ZNF540-208ENST00000589857 IGHV7-4-1A0A0J9YVY3 117 aa8.11□□□□□ -1.11
ZNF540-208ENST00000589857 TMEM213A2RRL7 107 aa8.11□□□□□ -1.11
ZNF540-208ENST00000589857 EREGO14944 169 aa8.11□□□□□ -1.11
ZNF540-208ENST00000589857 HBDP02042 147 aa8.11□□□□□ -1.11
ZNF540-208ENST00000589857 CSN3P07498 182 aa8.11□□□□□ -1.11
ZNF540-208ENST00000589857 MED14OSP0DP75 135 aa8.11□□□□□ -1.11
ZNF540-208ENST00000589857 HLA-DMBP28068 263 aa8.11□□□□□ -1.11
ZNF540-208ENST00000589857 ZNF80P51504 273 aaPredicted RBP8.11□□□□□ -1.11
ZNF540-208ENST00000589857 ERCC8Q13216 396 aa8.11□□□□□ -1.11
ZNF540-208ENST00000589857 IGFL4Q6B9Z1 124 aa8.11□□□□□ -1.11
ZNF540-208ENST00000589857 IL17RELQ6ZVW7 336 aa8.11□□□□□ -1.11
ZNF540-208ENST00000589857 RNF182Q8N6D2 247 aa8.11□□□□□ -1.11
ZNF540-208ENST00000589857 JMJD8Q96S16 334 aa8.11□□□□□ -1.11
ZNF540-208ENST00000589857 DAZ1Q9NQZ3 744 aaKnown RBP8.11□□□□□ -1.11
ZNF540-208ENST00000589857 IGHV4-4A0A075B6R2 117 aa8.1□□□□□ -1.11
ZNF540-208ENST00000589857 IGHV3-66A0A0C4DH42 116 aa8.1□□□□□ -1.11
ZNF540-208ENST00000589857 PRAC2D3DTV9 90 aa8.1□□□□□ -1.11
ZNF540-208ENST00000589857 ZNF207O43670 478 aaKnown RBP8.1□□□□□ -1.11
ZNF540-208ENST00000589857 TDRG1Q3Y452 100 aa8.1□□□□□ -1.11
ZNF540-208ENST00000589857 LINC01545Q5VT33 79 aa8.1□□□□□ -1.11
ZNF540-208ENST00000589857 AMN1Q8IY45 258 aa8.1□□□□□ -1.11
ZNF540-208ENST00000589857 ZNF418Q8TF45 676 aaPredicted RBP8.1□□□□□ -1.11
ZNF540-208ENST00000589857 DPF1Q92782 380 aa8.1□□□□□ -1.11
ZNF540-208ENST00000589857 SIGLEC8Q9NYZ4 499 aa8.1□□□□□ -1.11
ZNF540-208ENST00000589857 PEF1Q9UBV8 284 aaKnown RBP8.1□□□□□ -1.11
ZNF540-208ENST00000589857 CUBNO60494 3623 aa8.1□□□□□ -1.11
ZNF540-208ENST00000589857 CR1P17927 2039 aa8.09□□□□□ -1.11
ZNF540-208ENST00000589857 M0QZ24 198 aa8.09□□□□□ -1.11
ZNF540-208ENST00000589857 SNAI2O43623 268 aa8.09□□□□□ -1.11
ZNF540-208ENST00000589857 CFHR3Q02985 330 aa8.09□□□□□ -1.11
ZNF540-208ENST00000589857 GPHB5Q86YW7 130 aa8.09□□□□□ -1.11
ZNF540-208ENST00000589857 MRAP2Q96G30 205 aa8.09□□□□□ -1.11
ZNF540-208ENST00000589857 ZNF747Q9BV97 191 aa8.09□□□□□ -1.11
ZNF540-208ENST00000589857 LINC00527Q9UJ94 153 aa8.09□□□□□ -1.11
ZNF540-208ENST00000589857 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP8.08□□□□□ -1.12
ZNF540-208ENST00000589857 IGHV3OR16-13A0A075B7E8 117 aa8.08□□□□□ -1.12
ZNF540-208ENST00000589857 IGHV3-74A0A0B4J1X5 117 aa8.08□□□□□ -1.12
ZNF540-208ENST00000589857 LINC01546A6NGU7 62 aa8.08□□□□□ -1.12
ZNF540-208ENST00000589857 TCAPO15273 167 aa8.08□□□□□ -1.12
ZNF540-208ENST00000589857 PPP1R17O96001 155 aa8.08□□□□□ -1.12
ZNF540-208ENST00000589857 TSPOP30536 169 aa8.08□□□□□ -1.12
ZNF540-208ENST00000589857 ASIPP42127 132 aa8.08□□□□□ -1.12
ZNF540-208ENST00000589857 LGALS9BQ3B8N2 356 aa8.08□□□□□ -1.12
ZNF540-208ENST00000589857 SPANXN1Q5VSR9 72 aa8.08□□□□□ -1.12
ZNF540-208ENST00000589857 LGALS9CQ6DKI2 356 aa8.08□□□□□ -1.12
ZNF540-208ENST00000589857 SLC25A34Q6PIV7 304 aa8.08□□□□□ -1.12
ZNF540-208ENST00000589857 OR1N2Q8NGR9 330 aa8.08□□□□□ -1.12
ZNF540-208ENST00000589857 SMPXQ9UHP9 88 aa8.08□□□□□ -1.12
ZNF540-208ENST00000589857 IGHV3-49A0A0A0MS15 119 aa8.07□□□□□ -1.12
ZNF540-208ENST00000589857 SOCS3O14543 225 aa8.07□□□□□ -1.12
ZNF540-208ENST00000589857 ELANEP08246 267 aa8.07□□□□□ -1.12
ZNF540-208ENST00000589857 IGLL1P15814 213 aa8.07□□□□□ -1.12
ZNF540-208ENST00000589857 IFI27P40305 119 aaPredicted RBP8.07□□□□□ -1.12
ZNF540-208ENST00000589857 RPL11P62913 178 aaKnown RBP8.07□□□□□ -1.12
ZNF540-208ENST00000589857 ATOH7Q8N100 152 aa8.07□□□□□ -1.12
ZNF540-208ENST00000589857 DEFB125Q8N687 156 aa8.07□□□□□ -1.12
ZNF540-208ENST00000589857 RHPN1-AS1Q9BWJ2 59 aa8.07□□□□□ -1.12
ZNF540-208ENST00000589857 VPREB3Q9UKI3 123 aa8.07□□□□□ -1.12
ZNF540-208ENST00000589857 ANK3Q12955 4377 aaKnown RBP8.06□□□□□ -1.12
ZNF540-208ENST00000589857 ANK2Q01484 3957 aa8.06□□□□□ -1.12
ZNF540-208ENST00000589857 IGKV3D-20A0A0C4DH25 116 aa8.06□□□□□ -1.12
ZNF540-208ENST00000589857 LOC389332A0A1B0GUA5 103 aa8.06□□□□□ -1.12
ZNF540-208ENST00000589857 PRSS47A8MTI9 375 aa8.06□□□□□ -1.12
ZNF540-208ENST00000589857 K7EMI3 77 aa8.06□□□□□ -1.12
ZNF540-208ENST00000589857 TNFRSF6BO95407 300 aa8.06□□□□□ -1.12
ZNF540-208ENST00000589857 IGHV3-11P01762 117 aa8.06□□□□□ -1.12
ZNF540-208ENST00000589857 S100A4P26447 101 aaKnown RBP8.06□□□□□ -1.12
ZNF540-208ENST00000589857 LEPP41159 167 aa8.06□□□□□ -1.12
ZNF540-208ENST00000589857 BLCAPP62952 87 aa8.06□□□□□ -1.12
ZNF540-208ENST00000589857 DEFB112Q30KQ8 113 aa8.06□□□□□ -1.12
ZNF540-208ENST00000589857 TM4SF20Q53R12 229 aa8.06□□□□□ -1.12
ZNF540-208ENST00000589857 UNQ9165/PRO28630Q6UXU0 137 aa8.06□□□□□ -1.12
ZNF540-208ENST00000589857 APRG1Q8IVJ8 170 aa8.06□□□□□ -1.12
ZNF540-208ENST00000589857 Q8N8P6 123 aa8.06□□□□□ -1.12
ZNF540-208ENST00000589857 OR8A1Q8NGG7 326 aa8.06□□□□□ -1.12
ZNF540-208ENST00000589857 ODF3Q96PU9 254 aa8.06□□□□□ -1.12
ZNF540-208ENST00000589857 GOLT1BQ9Y3E0 138 aa8.06□□□□□ -1.12
ZNF540-208ENST00000589857 LINC01549A6NIU2 74 aa8.05□□□□□ -1.12
ZNF540-208ENST00000589857 ATP5LO75964 103 aa8.05□□□□□ -1.12
ZNF540-208ENST00000589857 NPYP01303 97 aa8.05□□□□□ -1.12
ZNF540-208ENST00000589857 PSMB8P28062 276 aa8.05□□□□□ -1.12
ZNF540-208ENST00000589857 FCER1GP30273 86 aa8.05□□□□□ -1.12
ZNF540-208ENST00000589857 SNRPD3P62318 126 aaKnown RBP8.05□□□□□ -1.12
ZNF540-208ENST00000589857 BATFQ16520 125 aa8.05□□□□□ -1.12
ZNF540-208ENST00000589857 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP8.05□□□□□ -1.12
ZNF540-208ENST00000589857 IFI27L1Q96BM0 104 aa8.05□□□□□ -1.12
ZNF540-208ENST00000589857 RNF185Q96GF1 192 aa8.05□□□□□ -1.12
ZNF540-208ENST00000589857 PLXNB1O43157 2135 aa8.05□□□□□ -1.12
ZNF540-208ENST00000589857 LGALS9O00182 355 aa8.04□□□□□ -1.12
ZNF540-208ENST00000589857 TRBV12-3P01733 135 aa8.04□□□□□ -1.12
ZNF540-208ENST00000589857 G0S2P27469 103 aa8.04□□□□□ -1.12
ZNF540-208ENST00000589857 GAGE1Q13065 139 aa8.04□□□□□ -1.12
ZNF540-208ENST00000589857 OR2K2Q8NGT1 345 aa8.04□□□□□ -1.12
ZNF540-208ENST00000589857 FAM19A4Q96LR4 140 aa8.04□□□□□ -1.12
ZNF540-208ENST00000589857 KLK15Q9H2R5 256 aa8.04□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 46.5 ms