RNA–Protein interactions for RNA: ENST00000589677.5

SMARCA4-214, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene SMARCA4, Length 5,181 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA4-214ENST00000589677 PIP4P2Q8N4L2 257 aa11.49□□□□□ -0.57
SMARCA4-214ENST00000589677 PLXND1Q9Y4D7 1925 aa11.49□□□□□ -0.57
SMARCA4-214ENST00000589677 SPANXB1Q9NS25 103 aaPredicted RBP11.49□□□□□ -0.57
SMARCA4-214ENST00000589677 C11orf53Q8IXP5 236 aa11.49□□□□□ -0.57
SMARCA4-214ENST00000589677 DOCK8Q8NF50 2099 aa11.49□□□□□ -0.57
SMARCA4-214ENST00000589677 ORMDL1Q9P0S3 153 aa11.48□□□□□ -0.57
SMARCA4-214ENST00000589677 HERV-K104P63124 156 aa11.48□□□□□ -0.57
SMARCA4-214ENST00000589677 SPINK13Q1W4C9 94 aa11.48□□□□□ -0.57
SMARCA4-214ENST00000589677 KLK9Q9UKQ9 250 aa11.48□□□□□ -0.57
SMARCA4-214ENST00000589677 A0A1W2PRX2 142 aa11.48□□□□□ -0.57
SMARCA4-214ENST00000589677 C19orf71A6NCJ1 209 aa11.48□□□□□ -0.57
SMARCA4-214ENST00000589677 KLHL30-AS1Q8NEE0 82 aa11.48□□□□□ -0.57
SMARCA4-214ENST00000589677 COL4A6Q14031 1691 aa11.48□□□□□ -0.57
SMARCA4-214ENST00000589677 IGLV3-9A0A075B6K5 115 aa11.48□□□□□ -0.57
SMARCA4-214ENST00000589677 A0A0G2JNJ9 132 aa11.48□□□□□ -0.57
SMARCA4-214ENST00000589677 SAA4P35542 130 aa11.48□□□□□ -0.57
SMARCA4-214ENST00000589677 UBE2E1P51965 193 aa11.48□□□□□ -0.57
SMARCA4-214ENST00000589677 NDUFV3P56181 108 aaKnown RBP11.48□□□□□ -0.57
SMARCA4-214ENST00000589677 Q9UFV3 132 aa11.48□□□□□ -0.57
SMARCA4-214ENST00000589677 THADAQ6YHU6 1953 aa11.48□□□□□ -0.57
SMARCA4-214ENST00000589677 RNF138Q8WVD3 245 aa11.47□□□□□ -0.57
SMARCA4-214ENST00000589677 TOMM6Q96B49 74 aa11.47□□□□□ -0.57
SMARCA4-214ENST00000589677 IGLV2-14P01704 120 aa11.47□□□□□ -0.57
SMARCA4-214ENST00000589677 DIAPH2-AS1Q14236 149 aa11.47□□□□□ -0.57
SMARCA4-214ENST00000589677 H0YGX0 51 aa11.46□□□□□ -0.57
SMARCA4-214ENST00000589677 ODF3L1Q8IXM7 274 aa11.46□□□□□ -0.57
SMARCA4-214ENST00000589677 RIF1Q5UIP0 2472 aaKnown RBP11.46□□□□□ -0.58
SMARCA4-214ENST00000589677 E7EQL1 145 aa11.46□□□□□ -0.58
SMARCA4-214ENST00000589677 RS1O15537 224 aa11.46□□□□□ -0.58
SMARCA4-214ENST00000589677 DEFB131AP59861 70 aa11.46□□□□□ -0.58
SMARCA4-214ENST00000589677 MSRB1Q9NZV6 116 aa11.46□□□□□ -0.58
SMARCA4-214ENST00000589677 SPTBN2O15020 2390 aa11.46□□□□□ -0.58
SMARCA4-214ENST00000589677 TANC1Q9C0D5 1861 aa11.45□□□□□ -0.58
SMARCA4-214ENST00000589677 MT-ATP8P03928 68 aa11.45□□□□□ -0.58
SMARCA4-214ENST00000589677 FOXE3Q13461 319 aa11.45□□□□□ -0.58
SMARCA4-214ENST00000589677 MRPL23Q16540 153 aaKnown RBP11.45□□□□□ -0.58
SMARCA4-214ENST00000589677 ZFP2Q6ZN57 461 aa11.45□□□□□ -0.58
SMARCA4-214ENST00000589677 ZNRF2Q8NHG8 242 aa11.45□□□□□ -0.58
SMARCA4-214ENST00000589677 Q9H8V8 135 aa11.45□□□□□ -0.58
SMARCA4-214ENST00000589677 KAAG1Q9UBP8 84 aa11.45□□□□□ -0.58
SMARCA4-214ENST00000589677 TM2D2Q9BX73 214 aa11.45□□□□□ -0.58
SMARCA4-214ENST00000589677 IGFBPL1Q8WX77 278 aa11.44□□□□□ -0.58
SMARCA4-214ENST00000589677 TP53TG3Q9ULZ0 132 aa11.44□□□□□ -0.58
SMARCA4-214ENST00000589677 NDUFA11Q86Y39 141 aa11.44□□□□□ -0.58
SMARCA4-214ENST00000589677 BAALCQ8WXS3 180 aa11.44□□□□□ -0.58
SMARCA4-214ENST00000589677 ZNF318Q5VUA4 2279 aa11.44□□□□□ -0.58
SMARCA4-214ENST00000589677 I3L2K1 104 aa11.44□□□□□ -0.58
SMARCA4-214ENST00000589677 PTH2Q96A98 100 aa11.44□□□□□ -0.58
SMARCA4-214ENST00000589677 UBE2E2Q96LR5 201 aa11.44□□□□□ -0.58
SMARCA4-214ENST00000589677 PI4KAP42356 2102 aa11.44□□□□□ -0.58
SMARCA4-214ENST00000589677 C11orf86A6NJI1 115 aa11.44□□□□□ -0.58
SMARCA4-214ENST00000589677 C22orf46C9J442 243 aa11.44□□□□□ -0.58
SMARCA4-214ENST00000589677 G3V318 75 aa11.44□□□□□ -0.58
SMARCA4-214ENST00000589677 RPL39LQ96EH5 51 aaKnown RBP11.44□□□□□ -0.58
SMARCA4-214ENST00000589677 IGLV2-8P01709 118 aa11.43□□□□□ -0.58
SMARCA4-214ENST00000589677 CNOT1A5YKK6 2376 aaKnown RBP11.43□□□□□ -0.58
SMARCA4-214ENST00000589677 GNRH2O43555 120 aa11.43□□□□□ -0.58
SMARCA4-214ENST00000589677 LINC00643Q86TS7 51 aa11.43□□□□□ -0.58
SMARCA4-214ENST00000589677 BRD3OSQ6XYD6 125 aa11.43□□□□□ -0.58
SMARCA4-214ENST00000589677 TIMM17AQ99595 171 aa11.43□□□□□ -0.58
SMARCA4-214ENST00000589677 IGHV3-16A0A0C4DH30 117 aa11.42□□□□□ -0.58
SMARCA4-214ENST00000589677 IGHV3-38A0A0C4DH36 116 aa11.42□□□□□ -0.58
SMARCA4-214ENST00000589677 F6UB75 175 aa11.42□□□□□ -0.58
SMARCA4-214ENST00000589677 P0C879 139 aa11.42□□□□□ -0.58
SMARCA4-214ENST00000589677 DSCR9P59020 149 aa11.42□□□□□ -0.58
SMARCA4-214ENST00000589677 CEP250Q9BV73 2442 aa11.42□□□□□ -0.58
SMARCA4-214ENST00000589677 HELZP42694 1942 aaKnown RBP11.42□□□□□ -0.58
SMARCA4-214ENST00000589677 GVINP1Q7Z2Y8 2422 aa11.42□□□□□ -0.58
SMARCA4-214ENST00000589677 IGKV1OR2-108A0A075B7D4 117 aa11.42□□□□□ -0.58
SMARCA4-214ENST00000589677 IGKV1-17P01599 117 aa11.42□□□□□ -0.58
SMARCA4-214ENST00000589677 TCL1BO95988 128 aa11.41□□□□□ -0.58
SMARCA4-214ENST00000589677 SLC25A29Q8N8R3 303 aa11.41□□□□□ -0.58
SMARCA4-214ENST00000589677 KMT2EQ8IZD2 1858 aa11.41□□□□□ -0.58
SMARCA4-214ENST00000589677 LGALS9O00182 355 aa11.41□□□□□ -0.58
SMARCA4-214ENST00000589677 IGHV7-4-1A0A0J9YVY3 117 aa11.41□□□□□ -0.58
SMARCA4-214ENST00000589677 GDF5OSQ5U4N7 250 aa11.41□□□□□ -0.58
SMARCA4-214ENST00000589677 SUMO4Q6EEV6 95 aa11.41□□□□□ -0.58
SMARCA4-214ENST00000589677 TRAV12-2A0A075B6T6 113 aa11.41□□□□□ -0.58
SMARCA4-214ENST00000589677 IGKV3D-7A0A0C4DH55 119 aa11.4□□□□□ -0.58
SMARCA4-214ENST00000589677 Q6ZS92 163 aa11.4□□□□□ -0.58
SMARCA4-214ENST00000589677 A0A0J9YXV3 536 aa11.4□□□□□ -0.58
SMARCA4-214ENST00000589677 C5orf47Q569G3 176 aa11.4□□□□□ -0.58
SMARCA4-214ENST00000589677 RNASE13Q5GAN3 156 aaKnown RBP11.4□□□□□ -0.58
SMARCA4-214ENST00000589677 SHANK1Q9Y566 2161 aa11.4□□□□□ -0.58
SMARCA4-214ENST00000589677 ZNF503Q96F45 646 aa11.4□□□□□ -0.58
SMARCA4-214ENST00000589677 IGHG2P01859 326 aa11.4□□□□□ -0.58
SMARCA4-214ENST00000589677 K7EIM0 57 aa11.39□□□□□ -0.59
SMARCA4-214ENST00000589677 UQCRQO14949 82 aa11.39□□□□□ -0.59
SMARCA4-214ENST00000589677 CDK2AP2O75956 126 aa11.39□□□□□ -0.59
SMARCA4-214ENST00000589677 NXPH4O95158 308 aa11.39□□□□□ -0.59
SMARCA4-214ENST00000589677 LHBP01229 141 aa11.39□□□□□ -0.59
SMARCA4-214ENST00000589677 PSMB8P28062 276 aa11.39□□□□□ -0.59
SMARCA4-214ENST00000589677 FER1L5A0AVI2 2057 aa11.39□□□□□ -0.59
SMARCA4-214ENST00000589677 B4DSR2 109 aa11.39□□□□□ -0.59
SMARCA4-214ENST00000589677 MBD6Q96DN6 1003 aa11.39□□□□□ -0.59
SMARCA4-214ENST00000589677 FRMPD3Q5JV73 1810 aa11.39□□□□□ -0.59
SMARCA4-214ENST00000589677 Q8N1Y9 231 aa11.39□□□□□ -0.59
SMARCA4-214ENST00000589677 C3orf56Q8N813 242 aa11.39□□□□□ -0.59
SMARCA4-214ENST00000589677 MED14OSP0DP75 135 aa11.38□□□□□ -0.59
SMARCA4-214ENST00000589677 ZNF295-AS1Q8N0V1 137 aa11.38□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 50.5 ms