RNA–Protein interactions for RNA: ENST00000589318.5

DDX39A-209, Transcript of DExD-box helicase 39A, human

TSL 1 (best)

Gene DDX39A, Length 1,903 nt, Biotype retained intron, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
DDX39A-209	ENST00000589318		P01737	135 aa		11.81	□□□□□ -0.52
DDX39A-209	ENST00000589318	FOXA3	P55318	350 aa	Predicted RBP	11.81	□□□□□ -0.52
DDX39A-209	ENST00000589318	SAMD5	Q5TGI4	173 aa		11.81	□□□□□ -0.52
DDX39A-209	ENST00000589318	ADAMTSL5	Q6ZMM2	481 aa		11.81	□□□□□ -0.52
DDX39A-209	ENST00000589318	C17orf77	Q96MU5	243 aa		11.81	□□□□□ -0.52
DDX39A-209	ENST00000589318	YAE1D1	Q9NRH1	226 aa		11.81	□□□□□ -0.52
DDX39A-209	ENST00000589318	TRBV19	A0A075B6N1	114 aa		11.8	□□□□□ -0.52
DDX39A-209	ENST00000589318	IGHV3-11	P01762	117 aa		11.8	□□□□□ -0.52
DDX39A-209	ENST00000589318	RPL24	P83731	157 aa	Known RBP	11.8	□□□□□ -0.52
DDX39A-209	ENST00000589318	S100A7A	Q86SG5	101 aa		11.8	□□□□□ -0.52
DDX39A-209	ENST00000589318		Q8N2B8	174 aa		11.8	□□□□□ -0.52
DDX39A-209	ENST00000589318	TMEM86B	Q8N661	226 aa		11.8	□□□□□ -0.52
DDX39A-209	ENST00000589318	FMC1	Q96HJ9	113 aa		11.8	□□□□□ -0.52
DDX39A-209	ENST00000589318	MLST8	Q9BVC4	326 aa		11.8	□□□□□ -0.52
DDX39A-209	ENST00000589318		Q9H3A6	140 aa		11.8	□□□□□ -0.52
DDX39A-209	ENST00000589318	NOTCH2	Q04721	2471 aa		11.8	□□□□□ -0.52
DDX39A-209	ENST00000589318	C19orf71	A6NCJ1	209 aa		11.8	□□□□□ -0.52
DDX39A-209	ENST00000589318	PGP	A6NDG6	321 aa		11.8	□□□□□ -0.52
DDX39A-209	ENST00000589318	ARL3	P36405	182 aa		11.8	□□□□□ -0.52
DDX39A-209	ENST00000589318	DAZAP1	Q96EP5	407 aa	Known RBP	11.8	□□□□□ -0.52
DDX39A-209	ENST00000589318	HIGD1B	Q9P298	99 aa		11.8	□□□□□ -0.52
DDX39A-209	ENST00000589318	TEX48	A0A1B0GUV7	120 aa		11.79	□□□□□ -0.52
DDX39A-209	ENST00000589318	CKS1B	P61024	79 aa		11.79	□□□□□ -0.52
DDX39A-209	ENST00000589318	GNG5	P63218	68 aa		11.79	□□□□□ -0.52
DDX39A-209	ENST00000589318	SMAGP	Q0VAQ4	97 aa		11.79	□□□□□ -0.52
DDX39A-209	ENST00000589318	LINC00479	Q96M42	142 aa		11.79	□□□□□ -0.52
DDX39A-209	ENST00000589318	GTSF1L	Q9H1H1	148 aa		11.79	□□□□□ -0.52
DDX39A-209	ENST00000589318	EPDR1	Q9UM22	224 aa		11.79	□□□□□ -0.52
DDX39A-209	ENST00000589318	TMEM89	A2RUT3	159 aa		11.78	□□□□□ -0.52
DDX39A-209	ENST00000589318	MRAP2	Q96G30	205 aa		11.78	□□□□□ -0.52
DDX39A-209	ENST00000589318	VGLL1	Q99990	258 aa		11.78	□□□□□ -0.52
DDX39A-209	ENST00000589318	NPIPB6	E9PJ23	425 aa		11.78	□□□□□ -0.52
DDX39A-209	ENST00000589318	BUB3	O43684	328 aa		11.78	□□□□□ -0.52
DDX39A-209	ENST00000589318	SIGLEC15	Q6ZMC9	328 aa		11.78	□□□□□ -0.52
DDX39A-209	ENST00000589318	SMR3A	Q99954	134 aa		11.78	□□□□□ -0.52
DDX39A-209	ENST00000589318	ESM1	Q9NQ30	184 aa		11.78	□□□□□ -0.52
DDX39A-209	ENST00000589318	OTOR	Q9NRC9	128 aa		11.78	□□□□□ -0.52
DDX39A-209	ENST00000589318	SMAD5-AS1	Q9Y6J3	95 aa		11.78	□□□□□ -0.52
DDX39A-209	ENST00000589318		U3KQE9	123 aa		11.78	□□□□□ -0.52
DDX39A-209	ENST00000589318	DNAJC9-AS1	A6NH13	148 aa		11.77	□□□□□ -0.53
DDX39A-209	ENST00000589318	SLC25A5	P05141	298 aa	Known RBP	11.77	□□□□□ -0.53
DDX39A-209	ENST00000589318	EXOC3-AS1	Q8N2X6	119 aa		11.77	□□□□□ -0.53
DDX39A-209	ENST00000589318	MYOZ3	Q8TDC0	251 aa		11.77	□□□□□ -0.53
DDX39A-209	ENST00000589318	LTA	P01374	205 aa		11.76	□□□□□ -0.53
DDX39A-209	ENST00000589318	APOH	P02749	345 aa	Predicted RBP	11.76	□□□□□ -0.53
DDX39A-209	ENST00000589318	RPL7	P18124	248 aa	Known RBP	11.76	□□□□□ -0.53
DDX39A-209	ENST00000589318	RIG	Q13278	110 aa		11.76	□□□□□ -0.53
DDX39A-209	ENST00000589318	UNQ9165/PRO28630	Q6UXU0	137 aa		11.76	□□□□□ -0.53
DDX39A-209	ENST00000589318	GTSF1	Q8WW33	167 aa		11.76	□□□□□ -0.53
DDX39A-209	ENST00000589318	PGLYRP4	Q96LB8	373 aa		11.76	□□□□□ -0.53
DDX39A-209	ENST00000589318	MTOR	P42345	2549 aa		11.76	□□□□□ -0.53
DDX39A-209	ENST00000589318		H0Y8G0	127 aa		11.76	□□□□□ -0.53
DDX39A-209	ENST00000589318	NDUFA4	O00483	81 aa		11.76	□□□□□ -0.53
DDX39A-209	ENST00000589318	PDE6H	Q13956	83 aa		11.76	□□□□□ -0.53
DDX39A-209	ENST00000589318	TMEM160	Q9NX00	188 aa		11.76	□□□□□ -0.53
DDX39A-209	ENST00000589318	TSSC4	Q9Y5U2	329 aa	Predicted RBP	11.76	□□□□□ -0.53
DDX39A-209	ENST00000589318	NF1	P21359	2839 aa		11.75	□□□□□ -0.53
DDX39A-209	ENST00000589318	TCRA	P04437	139 aa		11.75	□□□□□ -0.53
DDX39A-209	ENST00000589318	FOXE3	Q13461	319 aa		11.75	□□□□□ -0.53
DDX39A-209	ENST00000589318	LYPD1	Q8N2G4	141 aa		11.75	□□□□□ -0.53
DDX39A-209	ENST00000589318	PRSS3P2	Q8NHM4	247 aa		11.75	□□□□□ -0.53
DDX39A-209	ENST00000589318	ELANE	P08246	267 aa		11.74	□□□□□ -0.53
DDX39A-209	ENST00000589318		Q6AWC8	147 aa		11.74	□□□□□ -0.53
DDX39A-209	ENST00000589318	RNF152	Q8N8N0	203 aa		11.74	□□□□□ -0.53
DDX39A-209	ENST00000589318	ZC2HC1A	Q96GY0	325 aa		11.74	□□□□□ -0.53
DDX39A-209	ENST00000589318	METTL26	Q96S19	204 aa		11.74	□□□□□ -0.53
DDX39A-209	ENST00000589318	IGHV3-66	A0A0C4DH42	116 aa		11.74	□□□□□ -0.53
DDX39A-209	ENST00000589318	TRBV6-1	A0A0K0K1D8	114 aa		11.74	□□□□□ -0.53
DDX39A-209	ENST00000589318	RAB37	Q96AX2	223 aa		11.74	□□□□□ -0.53
DDX39A-209	ENST00000589318	SPANXB1	Q9NS25	103 aa	Predicted RBP	11.74	□□□□□ -0.53
DDX39A-209	ENST00000589318	IGHV3OR16-13	A0A075B7E8	117 aa		11.73	□□□□□ -0.53
DDX39A-209	ENST00000589318	IGHV3-49	A0A0A0MS15	119 aa		11.73	□□□□□ -0.53
DDX39A-209	ENST00000589318	IGHV3-74	A0A0B4J1X5	117 aa		11.73	□□□□□ -0.53
DDX39A-209	ENST00000589318		A0A1B0GUT8	65 aa		11.73	□□□□□ -0.53
DDX39A-209	ENST00000589318	SNAI2	O43623	268 aa		11.73	□□□□□ -0.53
DDX39A-209	ENST00000589318	LINC01559	Q495D7	138 aa		11.73	□□□□□ -0.53
DDX39A-209	ENST00000589318		A6NJY4	79 aa		11.72	□□□□□ -0.53
DDX39A-209	ENST00000589318		Q6ZSV7	163 aa		11.72	□□□□□ -0.53
DDX39A-209	ENST00000589318		M0R3E3	92 aa		11.72	□□□□□ -0.53
DDX39A-209	ENST00000589318	LY6G6D	O95868	133 aa		11.72	□□□□□ -0.53
DDX39A-209	ENST00000589318	IGLV2-11	P01706	119 aa		11.72	□□□□□ -0.53
DDX39A-209	ENST00000589318	HLA-DRB4	P13762	266 aa		11.72	□□□□□ -0.53
DDX39A-209	ENST00000589318	SGK494	Q96LW2	274 aa		11.72	□□□□□ -0.53
DDX39A-209	ENST00000589318	MRPL16	Q9NX20	251 aa	Known RBP	11.72	□□□□□ -0.53
DDX39A-209	ENST00000589318	HLA-DRB4	X5D2U9	266 aa		11.72	□□□□□ -0.53
DDX39A-209	ENST00000589318	GLMP	Q8WWB7	406 aa		11.71	□□□□□ -0.53
DDX39A-209	ENST00000589318	MCRIP2	Q9BUT9	160 aa	Known RBP	11.71	□□□□□ -0.53
DDX39A-209	ENST00000589318	HIVEP2	P31629	2446 aa		11.7	□□□□□ -0.54
DDX39A-209	ENST00000589318		K7EQM0	130 aa		11.7	□□□□□ -0.54
DDX39A-209	ENST00000589318	NCR2	O95944	276 aa		11.7	□□□□□ -0.54
DDX39A-209	ENST00000589318	UNQ5830/PRO19650/PRO19816	Q6UY13	95 aa		11.7	□□□□□ -0.54
DDX39A-209	ENST00000589318	TRAV8-1	A0A0A6YYK1	113 aa		11.7	□□□□□ -0.54
DDX39A-209	ENST00000589318		E9PLD3	99 aa		11.7	□□□□□ -0.54
DDX39A-209	ENST00000589318	ZNF138	P52744	262 aa		11.7	□□□□□ -0.54
DDX39A-209	ENST00000589318	CRYBA4	P53673	196 aa		11.7	□□□□□ -0.54
DDX39A-209	ENST00000589318	TAL2	Q16559	108 aa		11.7	□□□□□ -0.54
DDX39A-209	ENST00000589318	ZNF493	Q6ZR52	646 aa		11.7	□□□□□ -0.54
DDX39A-209	ENST00000589318	GOLT1A	Q6ZVE7	132 aa		11.7	□□□□□ -0.54
DDX39A-209	ENST00000589318	UBE2E2	Q96LR5	201 aa		11.7	□□□□□ -0.54
DDX39A-209	ENST00000589318	TM2D2	Q9BX73	214 aa		11.7	□□□□□ -0.54

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