RNA–Protein interactions for RNA: ENST00000588907.2

SCAMP4-211, Transcript of secretory carrier membrane protein 4, humanhuman

TSL 4

Gene SCAMP4, Length 547 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP4-211ENST00000588907 IBA57Q5T440 356 aaKnown RBP12.3□□□□□ -0.44
SCAMP4-211ENST00000588907 C15orf54Q8N8G6 183 aa12.3□□□□□ -0.44
SCAMP4-211ENST00000588907 TMEM263Q8WUH6 116 aaKnown RBP12.3□□□□□ -0.44
SCAMP4-211ENST00000588907 C16orf74Q96GX8 76 aa12.3□□□□□ -0.44
SCAMP4-211ENST00000588907 CBY3A6NI87 242 aa12.29□□□□□ -0.44
SCAMP4-211ENST00000588907 B4DEV8 164 aa12.29□□□□□ -0.44
SCAMP4-211ENST00000588907 ORM1P02763 201 aa12.29□□□□□ -0.44
SCAMP4-211ENST00000588907 CXCL1P09341 107 aa12.29□□□□□ -0.44
SCAMP4-211ENST00000588907 ERVFC1-1P60608 527 aa12.29□□□□□ -0.44
SCAMP4-211ENST00000588907 RPS20P60866 119 aaKnown RBP12.29□□□□□ -0.44
SCAMP4-211ENST00000588907 C10orf91Q5T1B1 145 aa12.29□□□□□ -0.44
SCAMP4-211ENST00000588907 CARHSP1Q9Y2V2 147 aaKnown RBP12.29□□□□□ -0.44
SCAMP4-211ENST00000588907 DNAH9Q9NYC9 4486 aa12.28□□□□□ -0.44
SCAMP4-211ENST00000588907 ADCYAP1P18509 176 aa12.28□□□□□ -0.44
SCAMP4-211ENST00000588907 OR5I1Q13606 314 aa12.28□□□□□ -0.44
SCAMP4-211ENST00000588907 MUC21Q5SSG8 566 aa12.28□□□□□ -0.44
SCAMP4-211ENST00000588907 ISOC2Q96AB3 205 aa12.28□□□□□ -0.44
SCAMP4-211ENST00000588907 OSTCQ9NRP0 149 aa12.28□□□□□ -0.44
SCAMP4-211ENST00000588907 X6R8D5 127 aa12.28□□□□□ -0.44
SCAMP4-211ENST00000588907 HTN1P15515 57 aa12.27□□□□□ -0.45
SCAMP4-211ENST00000588907 CT83Q5H943 113 aa12.27□□□□□ -0.45
SCAMP4-211ENST00000588907 SFRP2Q96HF1 295 aa12.27□□□□□ -0.45
SCAMP4-211ENST00000588907 RPP21Q9H633 154 aaKnown RBP12.27□□□□□ -0.45
SCAMP4-211ENST00000588907 IGKV3D-20A0A0C4DH25 116 aa12.26□□□□□ -0.45
SCAMP4-211ENST00000588907 PPP1R2P9O14990 202 aa12.26□□□□□ -0.45
SCAMP4-211ENST00000588907 ASIPP42127 132 aa12.26□□□□□ -0.45
SCAMP4-211ENST00000588907 ZNF415Q09FC8 603 aa12.26□□□□□ -0.45
SCAMP4-211ENST00000588907 DNLZQ5SXM8 178 aa12.26□□□□□ -0.45
SCAMP4-211ENST00000588907 SLC7A5P1Q8MH63 180 aa12.26□□□□□ -0.45
SCAMP4-211ENST00000588907 NUDT10Q8NFP7 164 aa12.26□□□□□ -0.45
SCAMP4-211ENST00000588907 RNASE8Q8TDE3 154 aaKnown RBP12.26□□□□□ -0.45
SCAMP4-211ENST00000588907 NUDT11Q96G61 164 aa12.26□□□□□ -0.45
SCAMP4-211ENST00000588907 C11orf68Q9H3H3 251 aaKnown RBP12.26□□□□□ -0.45
SCAMP4-211ENST00000588907 TP53TG3Q9ULZ0 132 aa12.26□□□□□ -0.45
SCAMP4-211ENST00000588907 HUWE1Q7Z6Z7 4374 aaKnown RBP12.25□□□□□ -0.45
SCAMP4-211ENST00000588907 TEX48A0A1B0GUV7 120 aa12.25□□□□□ -0.45
SCAMP4-211ENST00000588907 ZNF705GA8MUZ8 300 aaPredicted RBP12.25□□□□□ -0.45
SCAMP4-211ENST00000588907 M0R036 132 aa12.25□□□□□ -0.45
SCAMP4-211ENST00000588907 GATCO43716 136 aaKnown RBP12.25□□□□□ -0.45
SCAMP4-211ENST00000588907 TYMSP04818 313 aa12.25□□□□□ -0.45
SCAMP4-211ENST00000588907 Q6ZQT7 251 aa12.25□□□□□ -0.45
SCAMP4-211ENST00000588907 OR2D3Q8NGH3 330 aa12.25□□□□□ -0.45
SCAMP4-211ENST00000588907 RNASE7Q9H1E1 156 aaKnown RBP12.25□□□□□ -0.45
SCAMP4-211ENST00000588907 C11orf21Q9P2W6 132 aa12.25□□□□□ -0.45
SCAMP4-211ENST00000588907 SNURFLB1AK76 121 aa12.24□□□□□ -0.45
SCAMP4-211ENST00000588907 MT-ND4LP03901 98 aa12.24□□□□□ -0.45
SCAMP4-211ENST00000588907 MED14OSP0DP75 135 aa12.24□□□□□ -0.45
SCAMP4-211ENST00000588907 S100A4P26447 101 aaKnown RBP12.24□□□□□ -0.45
SCAMP4-211ENST00000588907 SVBPQ8N300 66 aa12.24□□□□□ -0.45
SCAMP4-211ENST00000588907 Q8NAQ8 132 aa12.24□□□□□ -0.45
SCAMP4-211ENST00000588907 OR10G8Q8NGN5 311 aa12.24□□□□□ -0.45
SCAMP4-211ENST00000588907 RETNQ9HD89 108 aa12.24□□□□□ -0.45
SCAMP4-211ENST00000588907 FBN3Q75N90 2809 aa12.23□□□□□ -0.45
SCAMP4-211ENST00000588907 IGHV3-16A0A0C4DH30 117 aa12.23□□□□□ -0.45
SCAMP4-211ENST00000588907 A8MWL6 223 aa12.23□□□□□ -0.45
SCAMP4-211ENST00000588907 TCL1AP56279 114 aa12.23□□□□□ -0.45
SCAMP4-211ENST00000588907 ANAPC16Q96DE5 110 aa12.23□□□□□ -0.45
SCAMP4-211ENST00000588907 SPXQ9BT56 116 aa12.23□□□□□ -0.45
SCAMP4-211ENST00000588907 IL36BQ9NZH7 164 aa12.23□□□□□ -0.45
SCAMP4-211ENST00000588907 IGHV4-28A0A0C4DH34 117 aa12.22□□□□□ -0.45
SCAMP4-211ENST00000588907 A0A1W2PPQ1 181 aa12.22□□□□□ -0.45
SCAMP4-211ENST00000588907 FAM231BA6NCW3 169 aa12.22□□□□□ -0.45
SCAMP4-211ENST00000588907 DAZ2Q13117 558 aaKnown RBP12.22□□□□□ -0.45
SCAMP4-211ENST00000588907 RHEBQ15382 184 aa12.22□□□□□ -0.45
SCAMP4-211ENST00000588907 C11orf72Q8NBR9 251 aa12.22□□□□□ -0.45
SCAMP4-211ENST00000588907 NDUFAF3Q9BU61 184 aa12.22□□□□□ -0.45
SCAMP4-211ENST00000588907 GFRA4Q9GZZ7 299 aa12.22□□□□□ -0.45
SCAMP4-211ENST00000588907 TIMM8BQ9Y5J9 83 aaPredicted RBP12.22□□□□□ -0.45
SCAMP4-211ENST00000588907 NBEAL2Q6ZNJ1 2754 aa12.22□□□□□ -0.45
SCAMP4-211ENST00000588907 LYRM9A8MSI8 78 aa12.21□□□□□ -0.45
SCAMP4-211ENST00000588907 SNAPINO95295 136 aa12.21□□□□□ -0.45
SCAMP4-211ENST00000588907 AZU1P20160 251 aa12.21□□□□□ -0.45
SCAMP4-211ENST00000588907 TMSB15BA0A087X1C1 80 aa12.2□□□□□ -0.46
SCAMP4-211ENST00000588907 F2Z2F3 143 aa12.2□□□□□ -0.46
SCAMP4-211ENST00000588907 GNRH2O43555 120 aa12.2□□□□□ -0.46
SCAMP4-211ENST00000588907 APOC3P02656 99 aa12.2□□□□□ -0.46
SCAMP4-211ENST00000588907 RPL19P84098 196 aaKnown RBP12.2□□□□□ -0.46
SCAMP4-211ENST00000588907 LGALS9BQ3B8N2 356 aa12.2□□□□□ -0.46
SCAMP4-211ENST00000588907 IL17DQ8TAD2 202 aa12.2□□□□□ -0.46
SCAMP4-211ENST00000588907 TSKUQ8WUA8 353 aa12.2□□□□□ -0.46
SCAMP4-211ENST00000588907 CTDSP1Q9GZU7 261 aa12.2□□□□□ -0.46
SCAMP4-211ENST00000588907 GSN-AS1Q9NRJ2 163 aa12.2□□□□□ -0.46
SCAMP4-211ENST00000588907 MDFICQ9P1T7 246 aa12.2□□□□□ -0.46
SCAMP4-211ENST00000588907 V9GYV3 84 aa12.2□□□□□ -0.46
SCAMP4-211ENST00000588907 OR5AL1P0C617 328 aa12.19□□□□□ -0.46
SCAMP4-211ENST00000588907 RNF212Q495C1 297 aa12.19□□□□□ -0.46
SCAMP4-211ENST00000588907 PIK3CD-AS1Q5SR53 167 aa12.19□□□□□ -0.46
SCAMP4-211ENST00000588907 FER1L6-AS1Q8NA97 138 aa12.19□□□□□ -0.46
SCAMP4-211ENST00000588907 PTH2Q96A98 100 aa12.19□□□□□ -0.46
SCAMP4-211ENST00000588907 C9orf85Q96MD7 179 aa12.19□□□□□ -0.46
SCAMP4-211ENST00000588907 PLAC8L1A1L4L8 177 aa12.18□□□□□ -0.46
SCAMP4-211ENST00000588907 H3BVH4 76 aa12.18□□□□□ -0.46
SCAMP4-211ENST00000588907 M0R2P5 195 aa12.18□□□□□ -0.46
SCAMP4-211ENST00000588907 SPART-AS1P0CW21 52 aa12.18□□□□□ -0.46
SCAMP4-211ENST00000588907 RNASE3P12724 160 aaKnown RBP12.18□□□□□ -0.46
SCAMP4-211ENST00000588907 SYT8Q8NBV8 401 aa12.18□□□□□ -0.46
SCAMP4-211ENST00000588907 CLRN3Q8NCR9 226 aa12.18□□□□□ -0.46
SCAMP4-211ENST00000588907 SCRT2Q9NQ03 307 aa12.18□□□□□ -0.46
SCAMP4-211ENST00000588907 TMEM242Q9NWH2 141 aa12.18□□□□□ -0.46
SCAMP4-211ENST00000588907 PHLDA3Q9Y5J5 127 aa12.18□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 69.1 ms