RNA–Protein interactions for RNA: ENST00000588323.1

VPS4B-203, Transcript of vacuolar protein sorting 4 homolog B, humanhuman

TSL 3

Gene VPS4B, Length 463 nt, Biotype processed transcript, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS4B-203ENST00000588323 DEFB113Q30KQ7 82 aa1.76□□□□□ -2.13
VPS4B-203ENST00000588323 C12orf74Q32Q52 190 aa1.76□□□□□ -2.13
VPS4B-203ENST00000588323 PYY3Q5JQD4 70 aa1.76□□□□□ -2.13
VPS4B-203ENST00000588323 GLYATL3Q5SZD4 288 aa1.76□□□□□ -2.13
VPS4B-203ENST00000588323 SBSNQ6UWP8 590 aa1.76□□□□□ -2.13
VPS4B-203ENST00000588323 C16orf47Q6ZP98 133 aaPredicted RBP1.76□□□□□ -2.13
VPS4B-203ENST00000588323 LYPD1Q8N2G4 141 aa1.76□□□□□ -2.13
VPS4B-203ENST00000588323 DEFB125Q8N687 156 aa1.76□□□□□ -2.13
VPS4B-203ENST00000588323 C5orf17Q8NAS9 161 aa1.76□□□□□ -2.13
VPS4B-203ENST00000588323 NUP35Q8NFH5 326 aa1.76□□□□□ -2.13
VPS4B-203ENST00000588323 OR4S1Q8NGB4 309 aa1.76□□□□□ -2.13
VPS4B-203ENST00000588323 OR5D14Q8NGL3 314 aa1.76□□□□□ -2.13
VPS4B-203ENST00000588323 OR4C16Q8NGL9 310 aa1.76□□□□□ -2.13
VPS4B-203ENST00000588323 KLF14Q8TD94 323 aaPredicted RBP1.76□□□□□ -2.13
VPS4B-203ENST00000588323 MAGOHBQ96A72 148 aaKnown RBP1.76□□□□□ -2.13
VPS4B-203ENST00000588323 CIB3Q96Q77 187 aaPredicted RBP1.76□□□□□ -2.13
VPS4B-203ENST00000588323 SLC25A21Q9BQT8 299 aaPredicted RBP1.76□□□□□ -2.13
VPS4B-203ENST00000588323 MIEN1Q9BRT3 115 aa1.76□□□□□ -2.13
VPS4B-203ENST00000588323 VAMP8Q9BV40 100 aa1.76□□□□□ -2.13
VPS4B-203ENST00000588323 DPY30Q9C005 99 aa1.76□□□□□ -2.13
VPS4B-203ENST00000588323 IMUPQ9GZP8 106 aa1.76□□□□□ -2.13
VPS4B-203ENST00000588323 SMCO4Q9NRQ5 59 aa1.76□□□□□ -2.13
VPS4B-203ENST00000588323 FKBP11Q9NYL4 201 aa1.76□□□□□ -2.13
VPS4B-203ENST00000588323 CCDC167Q9P0B6 97 aa1.76□□□□□ -2.13
VPS4B-203ENST00000588323 RPUSD1Q9UJJ7 312 aaKnown RBP1.76□□□□□ -2.13
VPS4B-203ENST00000588323 PCTPQ9UKL6 214 aa1.76□□□□□ -2.13
VPS4B-203ENST00000588323 NOP16Q9Y3C1 178 aaKnown RBP1.76□□□□□ -2.13
VPS4B-203ENST00000588323 MRPS16Q9Y3D3 137 aaKnown RBP1.76□□□□□ -2.13
VPS4B-203ENST00000588323 PHLDA3Q9Y5J5 127 aa1.76□□□□□ -2.13
VPS4B-203ENST00000588323 ICOSQ9Y6W8 199 aa1.76□□□□□ -2.13
VPS4B-203ENST00000588323 ZANQ9Y493 2812 aa1.76□□□□□ -2.13
VPS4B-203ENST00000588323 PRKDCP78527 4128 aaKnown RBP1.76□□□□□ -2.13
VPS4B-203ENST00000588323 INTS1Q8N201 2190 aaKnown RBP1.75□□□□□ -2.13
VPS4B-203ENST00000588323 PCLOQ9Y6V0 5065 aa1.75□□□□□ -2.13
VPS4B-203ENST00000588323 IGLV4-60A0A075B6I1 120 aa1.75□□□□□ -2.13
VPS4B-203ENST00000588323 TRBV19A0A075B6N1 114 aa1.75□□□□□ -2.13
VPS4B-203ENST00000588323 TRAV9-1A0A075B6T8 112 aa1.75□□□□□ -2.13
VPS4B-203ENST00000588323 A0A087X0T9 212 aa1.75□□□□□ -2.13
VPS4B-203ENST00000588323 TMED7-TICAM2A0A0A6YYA0 188 aa1.75□□□□□ -2.13
VPS4B-203ENST00000588323 TRAV40A0A0B4J280 105 aa1.75□□□□□ -2.13
VPS4B-203ENST00000588323 LOC107984640A0A0U1RRK4 108 aa1.75□□□□□ -2.13
VPS4B-203ENST00000588323 CXorf51AA0A1B0GTR3 108 aa1.75□□□□□ -2.13
VPS4B-203ENST00000588323 LOC100130705A0A1B0GUX0 176 aa1.75□□□□□ -2.13
VPS4B-203ENST00000588323 A6NED7 52 aa1.75□□□□□ -2.13
VPS4B-203ENST00000588323 C16orf90A8MZG2 172 aa1.75□□□□□ -2.13
VPS4B-203ENST00000588323 FNDC10F2Z333 226 aa1.75□□□□□ -2.13
VPS4B-203ENST00000588323 GABARAPH6UMI1 98 aa1.75□□□□□ -2.13
VPS4B-203ENST00000588323 H7BYZ3 331 aa1.75□□□□□ -2.13
VPS4B-203ENST00000588323 J3QRK9 145 aa1.75□□□□□ -2.13
VPS4B-203ENST00000588323 M0R381 172 aa1.75□□□□□ -2.13
VPS4B-203ENST00000588323 MPC2O95563 127 aa1.75□□□□□ -2.13
VPS4B-203ENST00000588323 ZNF682O95780 498 aa1.75□□□□□ -2.13
VPS4B-203ENST00000588323 IGHG2P01859 326 aa1.75□□□□□ -2.13
VPS4B-203ENST00000588323 PMP2P02689 132 aa1.75□□□□□ -2.13
VPS4B-203ENST00000588323 ZNF705DP0CH99 300 aaPredicted RBP1.75□□□□□ -2.13
VPS4B-203ENST00000588323 ZNF728P0DKX0 622 aa1.75□□□□□ -2.13
VPS4B-203ENST00000588323 FABP2P12104 132 aa1.75□□□□□ -2.13
VPS4B-203ENST00000588323 IFITM1P13164 125 aa1.75□□□□□ -2.13
VPS4B-203ENST00000588323 NFYBP25208 207 aa1.75□□□□□ -2.13
VPS4B-203ENST00000588323 OR10J1P30954 320 aa1.75□□□□□ -2.13
VPS4B-203ENST00000588323 SDC2P34741 201 aa1.75□□□□□ -2.13
VPS4B-203ENST00000588323 AQP4P55087 323 aa1.75□□□□□ -2.13
VPS4B-203ENST00000588323 AKR1C1Q04828 323 aa1.75□□□□□ -2.13
VPS4B-203ENST00000588323 TFF3Q07654 80 aa1.75□□□□□ -2.13
VPS4B-203ENST00000588323 SLC38A11Q08AI6 406 aa1.75□□□□□ -2.13
VPS4B-203ENST00000588323 CATR1Q13166 79 aa1.75□□□□□ -2.13
VPS4B-203ENST00000588323 DHRS2Q13268 280 aa1.75□□□□□ -2.13
VPS4B-203ENST00000588323 VMA21Q3ZAQ7 101 aa1.75□□□□□ -2.13
VPS4B-203ENST00000588323 AMMECR1LQ6DCA0 310 aa1.75□□□□□ -2.13
VPS4B-203ENST00000588323 MRPL54Q6P161 138 aaKnown RBP1.75□□□□□ -2.13
VPS4B-203ENST00000588323 Q6Q795 121 aa1.75□□□□□ -2.13
VPS4B-203ENST00000588323 ADM2Q7Z4H4 148 aa1.75□□□□□ -2.13
VPS4B-203ENST00000588323 TRAPPC6BQ86SZ2 158 aa1.75□□□□□ -2.13
VPS4B-203ENST00000588323 LRP11Q86VZ4 500 aa1.75□□□□□ -2.13
VPS4B-203ENST00000588323 ZNF664Q8N3J9 261 aa1.75□□□□□ -2.13
VPS4B-203ENST00000588323 C10orf126Q8N4M7 172 aa1.75□□□□□ -2.13
VPS4B-203ENST00000588323 KCNRGQ8N5I3 272 aa1.75□□□□□ -2.13
VPS4B-203ENST00000588323 OR4K13Q8NH42 304 aa1.75□□□□□ -2.13
VPS4B-203ENST00000588323 SGMS2Q8NHU3 365 aa1.75□□□□□ -2.13
VPS4B-203ENST00000588323 FNDC9Q8TBE3 224 aa1.75□□□□□ -2.13
VPS4B-203ENST00000588323 RAB2BQ8WUD1 216 aa1.75□□□□□ -2.13
VPS4B-203ENST00000588323 COPS9Q8WXC6 57 aa1.75□□□□□ -2.13
VPS4B-203ENST00000588323 LINC00052Q96N35 136 aa1.75□□□□□ -2.13
VPS4B-203ENST00000588323 ERMAPQ96PL5 475 aaPredicted RBP1.75□□□□□ -2.13
VPS4B-203ENST00000588323 TSPAN32Q96QS1 320 aa1.75□□□□□ -2.13
VPS4B-203ENST00000588323 NAA38Q9BRA0 125 aaKnown RBP1.75□□□□□ -2.13
VPS4B-203ENST00000588323 TMEM191AQ9H0A3 160 aa1.75□□□□□ -2.13
VPS4B-203ENST00000588323 BANF2Q9H503 90 aa1.75□□□□□ -2.13
VPS4B-203ENST00000588323 DUSP21Q9H596 190 aa1.75□□□□□ -2.13
VPS4B-203ENST00000588323 ZNF835Q9Y2P0 537 aa1.75□□□□□ -2.13
VPS4B-203ENST00000588323 IER3IP1Q9Y5U9 82 aa1.75□□□□□ -2.13
VPS4B-203ENST00000588323 CACNA1CQ13936 2221 aa1.75□□□□□ -2.13
VPS4B-203ENST00000588323 ANK3Q12955 4377 aaKnown RBP1.75□□□□□ -2.13
VPS4B-203ENST00000588323 NCOA6Q14686 2063 aaPredicted RBP1.75□□□□□ -2.13
VPS4B-203ENST00000588323 PCM1Q15154 2024 aa1.74□□□□□ -2.13
VPS4B-203ENST00000588323 TNRC6AQ8NDV7 1962 aaKnown RBP1.74□□□□□ -2.13
VPS4B-203ENST00000588323 CHD5Q8TDI0 1954 aa1.74□□□□□ -2.13
VPS4B-203ENST00000588323 TRBV20OR9-2A0A075B6H5 130 aa1.74□□□□□ -2.13
VPS4B-203ENST00000588323 IGKV1OR2-108A0A075B7D4 117 aa1.74□□□□□ -2.13
VPS4B-203ENST00000588323 IGHV3OR16-8A0A075B7F1 116 aa1.74□□□□□ -2.13
Retrieved 100 of 20,778 RNA–protein pairs in 63.8 ms