RNA–Protein interactions for RNA: ENST00000587163.1

NPC1-205, Transcript of NPC intracellular cholesterol transporter 1, humanhuman

TSL 2

Gene NPC1, Length 431 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPC1-205ENST00000587163 TRAV8-6A0A0B4J262 113 aa10.83□□□□□ -0.68
NPC1-205ENST00000587163 OR7C2O60412 319 aa10.83□□□□□ -0.68
NPC1-205ENST00000587163 PLA2G1BP04054 148 aaKnown RBP10.83□□□□□ -0.68
NPC1-205ENST00000587163 OR10J3Q5JRS4 329 aa10.83□□□□□ -0.68
NPC1-205ENST00000587163 SLC25A29Q8N8R3 303 aa10.83□□□□□ -0.68
NPC1-205ENST00000587163 TYMSP04818 313 aa10.82□□□□□ -0.68
NPC1-205ENST00000587163 PFN1P07737 140 aaKnown RBP10.81□□□□□ -0.68
NPC1-205ENST00000587163 H2AFB2P0C5Z0 115 aa10.81□□□□□ -0.68
NPC1-205ENST00000587163 UBE2L3P68036 154 aaKnown RBP10.81□□□□□ -0.68
NPC1-205ENST00000587163 Q8N3U1 123 aa10.81□□□□□ -0.68
NPC1-205ENST00000587163 DEFB104AQ8WTQ1 72 aa10.81□□□□□ -0.68
NPC1-205ENST00000587163 TMED6Q8WW62 240 aa10.81□□□□□ -0.68
NPC1-205ENST00000587163 TVP23CQ96ET8 276 aa10.81□□□□□ -0.68
NPC1-205ENST00000587163 HYLS1Q96M11 299 aa10.81□□□□□ -0.68
NPC1-205ENST00000587163 WDR61Q9GZS3 305 aaKnown RBP10.81□□□□□ -0.68
NPC1-205ENST00000587163 LRP1Q07954 4544 aaKnown RBP10.8□□□□□ -0.68
NPC1-205ENST00000587163 FBLL1A6NHQ2 334 aaKnown RBP10.8□□□□□ -0.68
NPC1-205ENST00000587163 LECT2O14960 151 aa10.8□□□□□ -0.68
NPC1-205ENST00000587163 EIF3GO75821 320 aaKnown RBP eCLIP10.8□□□□□ -0.68
NPC1-205ENST00000587163 LELP1Q5T871 98 aa10.8□□□□□ -0.68
NPC1-205ENST00000587163 DPPA3Q6W0C5 159 aa10.8□□□□□ -0.68
NPC1-205ENST00000587163 OR5AC2Q9NZP5 309 aa10.8□□□□□ -0.68
NPC1-205ENST00000587163 PGPA6NDG6 321 aa10.79□□□□□ -0.68
NPC1-205ENST00000587163 F6UZH7 168 aa10.79□□□□□ -0.68
NPC1-205ENST00000587163 SIX6O95475 246 aa10.79□□□□□ -0.68
NPC1-205ENST00000587163 CFAP126Q5VTH2 177 aa10.79□□□□□ -0.68
NPC1-205ENST00000587163 RPH3ALQ9UNE2 315 aa10.79□□□□□ -0.68
NPC1-205ENST00000587163 IGHV3-73A0A0B4J1V6 119 aa10.78□□□□□ -0.68
NPC1-205ENST00000587163 TRAV21A0A0B4J279 112 aa10.78□□□□□ -0.68
NPC1-205ENST00000587163 H0YIZ8 118 aa10.78□□□□□ -0.68
NPC1-205ENST00000587163 RS1O15537 224 aa10.78□□□□□ -0.68
NPC1-205ENST00000587163 LAGE3Q14657 143 aa10.78□□□□□ -0.68
NPC1-205ENST00000587163 ZNF876PQ49A33 203 aa10.78□□□□□ -0.68
NPC1-205ENST00000587163 LINC01620Q4KN68 170 aa10.78□□□□□ -0.68
NPC1-205ENST00000587163 PRADC1Q9BSG0 188 aa10.78□□□□□ -0.68
NPC1-205ENST00000587163 SDF2L1Q9HCN8 221 aa10.78□□□□□ -0.68
NPC1-205ENST00000587163 OTORQ9NRC9 128 aa10.78□□□□□ -0.68
NPC1-205ENST00000587163 KCNIP2Q9NS61 270 aa10.78□□□□□ -0.68
NPC1-205ENST00000587163 TRAV8-1A0A0A6YYK1 113 aa10.77□□□□□ -0.69
NPC1-205ENST00000587163 TRBV6-4A0A1B0GX49 114 aa10.77□□□□□ -0.69
NPC1-205ENST00000587163 KRTAP10-4P60372 401 aaPredicted RBP10.77□□□□□ -0.69
NPC1-205ENST00000587163 RHOHQ15669 191 aa10.77□□□□□ -0.69
NPC1-205ENST00000587163 FFAR4Q5NUL3 377 aa10.77□□□□□ -0.69
NPC1-205ENST00000587163 GOLT1AQ6ZVE7 132 aa10.77□□□□□ -0.69
NPC1-205ENST00000587163 TM2D2Q9BX73 214 aa10.77□□□□□ -0.69
NPC1-205ENST00000587163 GTSF1LQ9H1H1 148 aa10.77□□□□□ -0.69
NPC1-205ENST00000587163 TREM1Q9NP99 234 aa10.77□□□□□ -0.69
NPC1-205ENST00000587163 BOLA1Q9Y3E2 137 aa10.77□□□□□ -0.69
NPC1-205ENST00000587163 HMCN2Q8NDA2 5059 aa10.76□□□□□ -0.69
NPC1-205ENST00000587163 IGLV2-33A0A075B6J2 118 aaPredicted RBP10.76□□□□□ -0.69
NPC1-205ENST00000587163 C17orf112F2Z3M2 114 aa10.76□□□□□ -0.69
NPC1-205ENST00000587163 LRRC37A5PQ49AS3 106 aa10.76□□□□□ -0.69
NPC1-205ENST00000587163 KHDC3LQ587J8 217 aa10.76□□□□□ -0.69
NPC1-205ENST00000587163 SERTAD4-AS1Q5TG53 156 aa10.76□□□□□ -0.69
NPC1-205ENST00000587163 ATP6V0E2Q8NHE4 81 aa10.76□□□□□ -0.69
NPC1-205ENST00000587163 ASB13Q8WXK3 278 aa10.76□□□□□ -0.69
NPC1-205ENST00000587163 NMES1Q9C002 83 aa10.76□□□□□ -0.69
NPC1-205ENST00000587163 C11orf21Q9P2W6 132 aa10.76□□□□□ -0.69
NPC1-205ENST00000587163 MBD2Q9UBB5 411 aa10.76□□□□□ -0.69
NPC1-205ENST00000587163 SCXQ7RTU7 201 aa10.75□□□□□ -0.69
NPC1-205ENST00000587163 CMTM2Q8TAZ6 248 aa10.75□□□□□ -0.69
NPC1-205ENST00000587163 KCNS1Q96KK3 526 aa10.75□□□□□ -0.69
NPC1-205ENST00000587163 SGK494Q96LW2 274 aa10.75□□□□□ -0.69
NPC1-205ENST00000587163 UBR4Q5T4S7 5183 aa10.75□□□□□ -0.69
NPC1-205ENST00000587163 FAM240BA0A1B0GVZ2 78 aa10.74□□□□□ -0.69
NPC1-205ENST00000587163 PGPEP1LA6NFU8 196 aa10.74□□□□□ -0.69
NPC1-205ENST00000587163 ZNF80P51504 273 aaPredicted RBP10.74□□□□□ -0.69
NPC1-205ENST00000587163 TAS2R45P59539 299 aa10.74□□□□□ -0.69
NPC1-205ENST00000587163 GNG5P63218 68 aa10.74□□□□□ -0.69
NPC1-205ENST00000587163 DAZ4Q86SG3 579 aaKnown RBP10.74□□□□□ -0.69
NPC1-205ENST00000587163 BAALCQ8WXS3 180 aa10.74□□□□□ -0.69
NPC1-205ENST00000587163 ATP5SQ99766 215 aa10.74□□□□□ -0.69
NPC1-205ENST00000587163 DAZ3Q9NR90 486 aaKnown RBP10.74□□□□□ -0.69
NPC1-205ENST00000587163 CIDEAO60543 219 aa10.73□□□□□ -0.69
NPC1-205ENST00000587163 C9orf85Q96MD7 179 aa10.73□□□□□ -0.69
NPC1-205ENST00000587163 TRAV8-3A0A0A6YYJ7 113 aa10.72□□□□□ -0.69
NPC1-205ENST00000587163 ZNF506Q5JVG8 444 aa10.72□□□□□ -0.69
NPC1-205ENST00000587163 FAM74A1Q5RGS3 127 aa10.72□□□□□ -0.69
NPC1-205ENST00000587163 TMEM75Q8N9X5 138 aa10.72□□□□□ -0.69
NPC1-205ENST00000587163 Q9UF83 564 aa10.72□□□□□ -0.69
NPC1-205ENST00000587163 MGST1P10620 155 aaKnown RBP10.71□□□□□ -0.69
NPC1-205ENST00000587163 ARL6IP6Q8N6S5 226 aa10.71□□□□□ -0.69
NPC1-205ENST00000587163 SYT8Q8NBV8 401 aa10.71□□□□□ -0.69
NPC1-205ENST00000587163 DNAJC30Q96LL9 226 aa10.71□□□□□ -0.69
NPC1-205ENST00000587163 LINC00694P0DN24 101 aa10.7□□□□□ -0.7
NPC1-205ENST00000587163 PTH2Q96A98 100 aa10.7□□□□□ -0.7
NPC1-205ENST00000587163 CHAC1Q9BUX1 264 aa10.7□□□□□ -0.7
NPC1-205ENST00000587163 SMIM3Q9BZL3 60 aa10.7□□□□□ -0.7
NPC1-205ENST00000587163 HSPB11Q9Y547 144 aa10.7□□□□□ -0.7
NPC1-205ENST00000587163 FAT3Q8TDW7 4589 aa10.7□□□□□ -0.7
NPC1-205ENST00000587163 GAGE12JA6NER3 117 aa10.69□□□□□ -0.7
NPC1-205ENST00000587163 RBFOX3A6NFN3 312 aa10.69□□□□□ -0.7
NPC1-205ENST00000587163 HMGB3O15347 200 aaKnown RBP10.69□□□□□ -0.7
NPC1-205ENST00000587163 OXTP01178 125 aa10.69□□□□□ -0.7
NPC1-205ENST00000587163 RNASE3P12724 160 aaKnown RBP10.69□□□□□ -0.7
NPC1-205ENST00000587163 GAGE1Q13065 139 aa10.69□□□□□ -0.7
NPC1-205ENST00000587163 GAGE4Q13068 117 aa10.69□□□□□ -0.7
NPC1-205ENST00000587163 GAGE5Q13069 117 aa10.69□□□□□ -0.7
NPC1-205ENST00000587163 GAGE13Q4V321 117 aa10.69□□□□□ -0.7
NPC1-205ENST00000587163 CIRBP-AS1Q8TBR5 109 aa10.69□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms