RNA–Protein interactions for RNA: ENST00000586638.5

APOC1-201, Transcript of apolipoprotein C1, humanhuman

TSL 3 BASIC

Gene APOC1, Length 425 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOC1-201ENST00000586638 HIST1H2BOP23527 126 aa7.54□□□□□ -1.2
APOC1-201ENST00000586638 HIST1H2BBP33778 126 aa7.54□□□□□ -1.2
APOC1-201ENST00000586638 RNASE4P34096 147 aaKnown RBP7.54□□□□□ -1.2
APOC1-201ENST00000586638 CAMPP49913 170 aa7.54□□□□□ -1.2
APOC1-201ENST00000586638 FXYD7P58549 80 aa7.54□□□□□ -1.2
APOC1-201ENST00000586638 HIST1H2BDP58876 126 aa7.54□□□□□ -1.2
APOC1-201ENST00000586638 HIST1H2BCP62807 126 aa7.54□□□□□ -1.2
APOC1-201ENST00000586638 HIST2H2BEQ16778 126 aa7.54□□□□□ -1.2
APOC1-201ENST00000586638 ODF3L2Q3SX64 289 aa7.54□□□□□ -1.2
APOC1-201ENST00000586638 HIST2H2BFQ5QNW6 126 aaPredicted RBP7.54□□□□□ -1.2
APOC1-201ENST00000586638 MUC21Q5SSG8 566 aa7.54□□□□□ -1.2
APOC1-201ENST00000586638 WDR73Q6P4I2 378 aa7.54□□□□□ -1.2
APOC1-201ENST00000586638 APRG1Q8IVJ8 170 aa7.54□□□□□ -1.2
APOC1-201ENST00000586638 MRAPQ8TCY5 172 aa7.54□□□□□ -1.2
APOC1-201ENST00000586638 HIST1H2BHQ93079 126 aa7.54□□□□□ -1.2
APOC1-201ENST00000586638 ODF3Q96PU9 254 aa7.54□□□□□ -1.2
APOC1-201ENST00000586638 HIST1H2BNQ99877 126 aa7.54□□□□□ -1.2
APOC1-201ENST00000586638 HIST1H2BMQ99879 126 aa7.54□□□□□ -1.2
APOC1-201ENST00000586638 ZNF256Q9Y2P7 627 aaPredicted RBP7.54□□□□□ -1.2
APOC1-201ENST00000586638 TRAV21A0A0B4J279 112 aa7.53□□□□□ -1.2
APOC1-201ENST00000586638 IGKV3D-20A0A0C4DH25 116 aa7.53□□□□□ -1.2
APOC1-201ENST00000586638 TRBV7-9A0A0J9YWB2 115 aa7.53□□□□□ -1.2
APOC1-201ENST00000586638 XKRY2A2RUG3 117 aa7.53□□□□□ -1.2
APOC1-201ENST00000586638 RBMY1BA6NDE4 496 aaKnown RBP7.53□□□□□ -1.2
APOC1-201ENST00000586638 RBMY1EA6NEQ0 496 aaKnown RBP7.53□□□□□ -1.2
APOC1-201ENST00000586638 KLLNB2CW77 178 aa7.53□□□□□ -1.2
APOC1-201ENST00000586638 IGLV1-51P01701 117 aa7.53□□□□□ -1.2
APOC1-201ENST00000586638 HLA-DQA1P01909 254 aa7.53□□□□□ -1.2
APOC1-201ENST00000586638 RBMY1DP0C7P1 496 aaKnown RBP7.53□□□□□ -1.2
APOC1-201ENST00000586638 IGLC6P0CF74 106 aa7.53□□□□□ -1.2
APOC1-201ENST00000586638 HLA-DRB4P13762 266 aa7.53□□□□□ -1.2
APOC1-201ENST00000586638 CTRLP40313 264 aa7.53□□□□□ -1.2
APOC1-201ENST00000586638 HBBP68871 147 aa7.53□□□□□ -1.2
APOC1-201ENST00000586638 SPINK13Q1W4C9 94 aa7.53□□□□□ -1.2
APOC1-201ENST00000586638 Q6AWC8 147 aa7.53□□□□□ -1.2
APOC1-201ENST00000586638 LYZL1Q6UWQ5 148 aa7.53□□□□□ -1.2
APOC1-201ENST00000586638 AMTNQ6UX39 209 aa7.53□□□□□ -1.2
APOC1-201ENST00000586638 ATP5L2Q7Z4Y8 100 aa7.53□□□□□ -1.2
APOC1-201ENST00000586638 FER1L6-AS1Q8NA97 138 aa7.53□□□□□ -1.2
APOC1-201ENST00000586638 SSBP4Q9BWG4 385 aaPredicted RBP7.53□□□□□ -1.2
APOC1-201ENST00000586638 HLA-DRB4X5D2U9 266 aa7.53□□□□□ -1.2
APOC1-201ENST00000586638 SORL1Q92673 2214 aa7.53□□□□□ -1.2
APOC1-201ENST00000586638 TRAV12-2A0A075B6T6 113 aa7.52□□□□□ -1.21
APOC1-201ENST00000586638 A0A1B0GUT8 65 aa7.52□□□□□ -1.21
APOC1-201ENST00000586638 C7orf71A4D174 169 aa7.52□□□□□ -1.21
APOC1-201ENST00000586638 MT-ND6P03923 174 aa7.52□□□□□ -1.21
APOC1-201ENST00000586638 S100A6P06703 90 aa7.52□□□□□ -1.21
APOC1-201ENST00000586638 NDUFA6P56556 154 aa7.52□□□□□ -1.21
APOC1-201ENST00000586638 SSTP61278 116 aa7.52□□□□□ -1.21
APOC1-201ENST00000586638 KIAA1644Q3SXP7 199 aa7.52□□□□□ -1.21
APOC1-201ENST00000586638 ANXA2RQ3ZCQ2 193 aa7.52□□□□□ -1.21
APOC1-201ENST00000586638 COX19Q49B96 90 aa7.52□□□□□ -1.21
APOC1-201ENST00000586638 GFI1BQ5VTD9 330 aa7.52□□□□□ -1.21
APOC1-201ENST00000586638 RASL11AQ6T310 242 aa7.52□□□□□ -1.21
APOC1-201ENST00000586638 ZNF575Q86XF7 245 aa7.52□□□□□ -1.21
APOC1-201ENST00000586638 GNB1LQ9BYB4 327 aa7.52□□□□□ -1.21
APOC1-201ENST00000586638 TRAV12-3A0A0B4J271 114 aa7.51□□□□□ -1.21
APOC1-201ENST00000586638 A8MTW9 85 aa7.51□□□□□ -1.21
APOC1-201ENST00000586638 H3BMM0 161 aa7.51□□□□□ -1.21
APOC1-201ENST00000586638 H3BVH4 76 aa7.51□□□□□ -1.21
APOC1-201ENST00000586638 FOXA3P55318 350 aaPredicted RBP7.51□□□□□ -1.21
APOC1-201ENST00000586638 SNRPEP62304 92 aaKnown RBP7.51□□□□□ -1.21
APOC1-201ENST00000586638 SLAQ13239 276 aa7.51□□□□□ -1.21
APOC1-201ENST00000586638 RIGQ13278 110 aa7.51□□□□□ -1.21
APOC1-201ENST00000586638 OXLD1Q5BKU9 147 aa7.51□□□□□ -1.21
APOC1-201ENST00000586638 OR2K2Q8NGT1 345 aa7.51□□□□□ -1.21
APOC1-201ENST00000586638 BORCS7Q96B45 105 aa7.51□□□□□ -1.21
APOC1-201ENST00000586638 WFDC10AQ9H1F0 79 aa7.51□□□□□ -1.21
APOC1-201ENST00000586638 TIMM8BQ9Y5J9 83 aaPredicted RBP7.51□□□□□ -1.21
APOC1-201ENST00000586638 OR11H12B2RN74 326 aa7.5□□□□□ -1.21
APOC1-201ENST00000586638 APCSP02743 223 aa7.5□□□□□ -1.21
APOC1-201ENST00000586638 CD7P09564 240 aa7.5□□□□□ -1.21
APOC1-201ENST00000586638 TSPOP30536 169 aa7.5□□□□□ -1.21
APOC1-201ENST00000586638 CDKN1BP46527 198 aa7.5□□□□□ -1.21
APOC1-201ENST00000586638 BIRC6Q9NR09 4857 aa7.5□□□□□ -1.21
APOC1-201ENST00000586638 C5orf52A6NGY3 159 aa7.49□□□□□ -1.21
APOC1-201ENST00000586638 SPRY2O43597 315 aa7.49□□□□□ -1.21
APOC1-201ENST00000586638 RBMY1A1P0DJD3 496 aaKnown RBP7.49□□□□□ -1.21
APOC1-201ENST00000586638 RBMY1CP0DJD4 496 aa7.49□□□□□ -1.21
APOC1-201ENST00000586638 ASIPP42127 132 aa7.49□□□□□ -1.21
APOC1-201ENST00000586638 RBMY1FQ15415 496 aaKnown RBP7.49□□□□□ -1.21
APOC1-201ENST00000586638 OR10AG1Q8NH19 301 aa7.49□□□□□ -1.21
APOC1-201ENST00000586638 SNAI2O43623 268 aa7.48□□□□□ -1.21
APOC1-201ENST00000586638 S100A8P05109 93 aa7.48□□□□□ -1.21
APOC1-201ENST00000586638 SRIP30626 198 aa7.48□□□□□ -1.21
APOC1-201ENST00000586638 C9orf66Q5T8R8 295 aa7.48□□□□□ -1.21
APOC1-201ENST00000586638 GATD1Q8NB37 220 aa7.48□□□□□ -1.21
APOC1-201ENST00000586638 KRTAP17-1Q9BYP8 105 aa7.48□□□□□ -1.21
APOC1-201ENST00000586638 F2Z2F3 143 aa7.47□□□□□ -1.21
APOC1-201ENST00000586638 UBE2CO00762 179 aa7.47□□□□□ -1.21
APOC1-201ENST00000586638 CRXO43186 299 aaPredicted RBP7.47□□□□□ -1.21
APOC1-201ENST00000586638 GNRH2O43555 120 aa7.47□□□□□ -1.21
APOC1-201ENST00000586638 ZNF324O75467 553 aaPredicted RBP7.47□□□□□ -1.21
APOC1-201ENST00000586638 S100A4P26447 101 aaKnown RBP7.47□□□□□ -1.21
APOC1-201ENST00000586638 TWIST1Q15672 202 aa7.47□□□□□ -1.21
APOC1-201ENST00000586638 IQCJQ1A5X6 159 aa7.47□□□□□ -1.21
APOC1-201ENST00000586638 PDZD11Q5EBL8 140 aa7.47□□□□□ -1.21
APOC1-201ENST00000586638 FAM159AQ6UWV7 190 aa7.47□□□□□ -1.21
APOC1-201ENST00000586638 TRPT1Q86TN4 253 aaKnown RBP7.47□□□□□ -1.21
APOC1-201ENST00000586638 STHQ8IWL8 128 aa7.47□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 125.8 ms