RNA–Protein interactions for RNA: ENST00000586486.1

PRKCSH-203, Transcript of protein kinase C substrate 80K-H, humanhuman

TSL 1 (best)

Gene PRKCSH, Length 1,613 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCSH-203ENST00000586486 TMEM263Q8WUH6 116 aaKnown RBP12.24□□□□□ -0.45
PRKCSH-203ENST00000586486 NAGKQ9UJ70 344 aa12.24□□□□□ -0.45
PRKCSH-203ENST00000586486 TENM3Q9P273 2699 aa12.24□□□□□ -0.45
PRKCSH-203ENST00000586486 ZNF493Q6ZR52 646 aa12.23□□□□□ -0.45
PRKCSH-203ENST00000586486 FAM231DQ6ZW35 169 aa12.23□□□□□ -0.45
PRKCSH-203ENST00000586486 RNASE8Q8TDE3 154 aaKnown RBP12.23□□□□□ -0.45
PRKCSH-203ENST00000586486 IGKV3D-20A0A0C4DH25 116 aa12.22□□□□□ -0.45
PRKCSH-203ENST00000586486 CBY3A6NI87 242 aa12.22□□□□□ -0.45
PRKCSH-203ENST00000586486 F8W036 122 aa12.22□□□□□ -0.45
PRKCSH-203ENST00000586486 HTN1P15515 57 aa12.22□□□□□ -0.45
PRKCSH-203ENST00000586486 PNRC1Q12796 327 aaPredicted RBP12.22□□□□□ -0.45
PRKCSH-203ENST00000586486 C10orf91Q5T1B1 145 aa12.22□□□□□ -0.45
PRKCSH-203ENST00000586486 ISOC2Q96AB3 205 aa12.22□□□□□ -0.45
PRKCSH-203ENST00000586486 DAZAP1Q96EP5 407 aaKnown RBP12.22□□□□□ -0.45
PRKCSH-203ENST00000586486 C16orf74Q96GX8 76 aa12.22□□□□□ -0.45
PRKCSH-203ENST00000586486 HUWE1Q7Z6Z7 4374 aaKnown RBP12.22□□□□□ -0.45
PRKCSH-203ENST00000586486 COL7A1Q02388 2944 aa12.22□□□□□ -0.45
PRKCSH-203ENST00000586486 TRGV11A0A075B6L2 103 aa12.22□□□□□ -0.45
PRKCSH-203ENST00000586486 IGHV4-28A0A0C4DH34 117 aa12.22□□□□□ -0.45
PRKCSH-203ENST00000586486 KRBOX1C9JBD0 128 aa12.22□□□□□ -0.45
PRKCSH-203ENST00000586486 ORM1P02763 201 aa12.22□□□□□ -0.45
PRKCSH-203ENST00000586486 PRM2P04554 102 aa12.22□□□□□ -0.45
PRKCSH-203ENST00000586486 AZU1P20160 251 aa12.22□□□□□ -0.45
PRKCSH-203ENST00000586486 ADIRFQ15847 76 aa12.22□□□□□ -0.45
PRKCSH-203ENST00000586486 IBA57Q5T440 356 aaKnown RBP12.22□□□□□ -0.45
PRKCSH-203ENST00000586486 C11orf68Q9H3H3 251 aaKnown RBP12.22□□□□□ -0.45
PRKCSH-203ENST00000586486 TP53TG3Q9ULZ0 132 aa12.22□□□□□ -0.45
PRKCSH-203ENST00000586486 TMEM189A5PLL7 270 aa12.21□□□□□ -0.46
PRKCSH-203ENST00000586486 B4DEV8 164 aa12.21□□□□□ -0.46
PRKCSH-203ENST00000586486 M0R036 132 aa12.21□□□□□ -0.46
PRKCSH-203ENST00000586486 P01737 135 aa12.21□□□□□ -0.46
PRKCSH-203ENST00000586486 TYMSP04818 313 aa12.21□□□□□ -0.46
PRKCSH-203ENST00000586486 C11orf72Q8NBR9 251 aa12.21□□□□□ -0.46
PRKCSH-203ENST00000586486 NUDT10Q8NFP7 164 aa12.21□□□□□ -0.46
PRKCSH-203ENST00000586486 NUDT11Q96G61 164 aa12.21□□□□□ -0.46
PRKCSH-203ENST00000586486 PLAC8L1A1L4L8 177 aa12.2□□□□□ -0.46
PRKCSH-203ENST00000586486 CXCL1P09341 107 aa12.2□□□□□ -0.46
PRKCSH-203ENST00000586486 DNLZQ5SXM8 178 aa12.2□□□□□ -0.46
PRKCSH-203ENST00000586486 SLC7A5P1Q8MH63 180 aa12.2□□□□□ -0.46
PRKCSH-203ENST00000586486 RNASE7Q9H1E1 156 aaKnown RBP12.2□□□□□ -0.46
PRKCSH-203ENST00000586486 OSTCQ9NRP0 149 aa12.2□□□□□ -0.46
PRKCSH-203ENST00000586486 CARHSP1Q9Y2V2 147 aaKnown RBP12.2□□□□□ -0.46
PRKCSH-203ENST00000586486 ERVFC1-1P60608 527 aa12.19□□□□□ -0.46
PRKCSH-203ENST00000586486 ZNF415Q09FC8 603 aa12.19□□□□□ -0.46
PRKCSH-203ENST00000586486 ZNF575Q86XF7 245 aa12.19□□□□□ -0.46
PRKCSH-203ENST00000586486 IL17DQ8TAD2 202 aa12.19□□□□□ -0.46
PRKCSH-203ENST00000586486 IGHV3-16A0A0C4DH30 117 aa12.19□□□□□ -0.46
PRKCSH-203ENST00000586486 GNRH2O43555 120 aa12.19□□□□□ -0.46
PRKCSH-203ENST00000586486 TCL1AP56279 114 aa12.19□□□□□ -0.46
PRKCSH-203ENST00000586486 RPL19P84098 196 aaKnown RBP12.19□□□□□ -0.46
PRKCSH-203ENST00000586486 SFRP2Q96HF1 295 aa12.19□□□□□ -0.46
PRKCSH-203ENST00000586486 RPP21Q9H633 154 aaKnown RBP12.19□□□□□ -0.46
PRKCSH-203ENST00000586486 ASIPP42127 132 aa12.18□□□□□ -0.46
PRKCSH-203ENST00000586486 RPS20P60866 119 aaKnown RBP12.18□□□□□ -0.46
PRKCSH-203ENST00000586486 CT83Q5H943 113 aa12.18□□□□□ -0.46
PRKCSH-203ENST00000586486 OR2D3Q8NGH3 330 aa12.18□□□□□ -0.46
PRKCSH-203ENST00000586486 MDFICQ9P1T7 246 aa12.18□□□□□ -0.46
PRKCSH-203ENST00000586486 TMSB15BA0A087X1C1 80 aa12.17□□□□□ -0.46
PRKCSH-203ENST00000586486 C15orf54Q8N8G6 183 aa12.17□□□□□ -0.46
PRKCSH-203ENST00000586486 GSN-AS1Q9NRJ2 163 aa12.17□□□□□ -0.46
PRKCSH-203ENST00000586486 XKRY2A2RUG3 117 aa12.16□□□□□ -0.46
PRKCSH-203ENST00000586486 SNURFLB1AK76 121 aa12.16□□□□□ -0.46
PRKCSH-203ENST00000586486 GATCO43716 136 aaKnown RBP12.16□□□□□ -0.46
PRKCSH-203ENST00000586486 DAZ2Q13117 558 aaKnown RBP12.16□□□□□ -0.46
PRKCSH-203ENST00000586486 C9orf85Q96MD7 179 aa12.16□□□□□ -0.46
PRKCSH-203ENST00000586486 TIMM8BQ9Y5J9 83 aaPredicted RBP12.16□□□□□ -0.46
PRKCSH-203ENST00000586486 U3KQK5 164 aa12.16□□□□□ -0.46
PRKCSH-203ENST00000586486 DEFB4AO15263 64 aa12.15□□□□□ -0.46
PRKCSH-203ENST00000586486 MED14OSP0DP75 135 aa12.15□□□□□ -0.46
PRKCSH-203ENST00000586486 RNASE3P12724 160 aaKnown RBP12.15□□□□□ -0.46
PRKCSH-203ENST00000586486 OR10G8Q8NGN5 311 aa12.15□□□□□ -0.46
PRKCSH-203ENST00000586486 IL36BQ9NZH7 164 aa12.15□□□□□ -0.46
PRKCSH-203ENST00000586486 A0A0J9YWU9 116 aa12.15□□□□□ -0.47
PRKCSH-203ENST00000586486 GRIFINA4D1Z8 144 aa12.15□□□□□ -0.47
PRKCSH-203ENST00000586486 S100A4P26447 101 aaKnown RBP12.15□□□□□ -0.47
PRKCSH-203ENST00000586486 SPXQ9BT56 116 aa12.15□□□□□ -0.47
PRKCSH-203ENST00000586486 V9GYV3 84 aa12.15□□□□□ -0.47
PRKCSH-203ENST00000586486 TEX48A0A1B0GUV7 120 aa12.14□□□□□ -0.47
PRKCSH-203ENST00000586486 EMP1P54849 157 aa12.14□□□□□ -0.47
PRKCSH-203ENST00000586486 STAB2Q8WWQ8 2551 aa12.14□□□□□ -0.47
PRKCSH-203ENST00000586486 LYRM9A8MSI8 78 aa12.13□□□□□ -0.47
PRKCSH-203ENST00000586486 A8MWL6 223 aa12.13□□□□□ -0.47
PRKCSH-203ENST00000586486 H3BVH4 76 aa12.13□□□□□ -0.47
PRKCSH-203ENST00000586486 PPP1R2P9O14990 202 aa12.13□□□□□ -0.47
PRKCSH-203ENST00000586486 IGLC6P0CF74 106 aa12.13□□□□□ -0.47
PRKCSH-203ENST00000586486 SSBP4Q9BWG4 385 aaPredicted RBP12.13□□□□□ -0.47
PRKCSH-203ENST00000586486 NOP10Q9NPE3 64 aaKnown RBP12.13□□□□□ -0.47
PRKCSH-203ENST00000586486 SCRT2Q9NQ03 307 aa12.13□□□□□ -0.47
PRKCSH-203ENST00000586486 DKK2Q9UBU2 259 aa12.13□□□□□ -0.47
PRKCSH-203ENST00000586486 SNAI2O43623 268 aa12.12□□□□□ -0.47
PRKCSH-203ENST00000586486 OR5AL1P0C617 328 aa12.12□□□□□ -0.47
PRKCSH-203ENST00000586486 ARMS2P0C7Q2 107 aa12.12□□□□□ -0.47
PRKCSH-203ENST00000586486 GZMBP10144 247 aa12.12□□□□□ -0.47
PRKCSH-203ENST00000586486 FAM222AQ5U5X8 452 aa12.12□□□□□ -0.47
PRKCSH-203ENST00000586486 A0A1W2PPQ1 181 aa12.11□□□□□ -0.47
PRKCSH-203ENST00000586486 FAM231BA6NCW3 169 aa12.11□□□□□ -0.47
PRKCSH-203ENST00000586486 SPINK4O60575 86 aa12.11□□□□□ -0.47
PRKCSH-203ENST00000586486 MT-ND4LP03901 98 aa12.11□□□□□ -0.47
PRKCSH-203ENST00000586486 SPART-AS1P0CW21 52 aa12.11□□□□□ -0.47
PRKCSH-203ENST00000586486 LGALS9BQ3B8N2 356 aa12.11□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 96.4 ms