RNA–Protein interactions for RNA: ENST00000586407.1

LIG3-208, Transcript of DNA ligase 3, humanhuman

TSL 5

Gene LIG3, Length 815 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG3-208ENST00000586407 TAAR5O14804 337 aa19.4■□□□□ 0.7
LIG3-208ENST00000586407 FLI1Q01543 452 aaPredicted RBP19.4■□□□□ 0.7
LIG3-208ENST00000586407 CYB561D1Q8N8Q1 229 aa19.4■□□□□ 0.7
LIG3-208ENST00000586407 LINC00479Q96M42 142 aa19.4■□□□□ 0.7
LIG3-208ENST00000586407 SPXQ9BT56 116 aa19.4■□□□□ 0.7
LIG3-208ENST00000586407 KRTAP1-5Q9BYS1 174 aa19.4■□□□□ 0.7
LIG3-208ENST00000586407 TRAV34A0A0B4J273 112 aa19.39■□□□□ 0.69
LIG3-208ENST00000586407 K7EQM0 130 aa19.39■□□□□ 0.69
LIG3-208ENST00000586407 CRYBA4P53673 196 aa19.39■□□□□ 0.69
LIG3-208ENST00000586407 TMEM75Q8N9X5 138 aa19.39■□□□□ 0.69
LIG3-208ENST00000586407 OR11H4Q8NGC9 324 aa19.39■□□□□ 0.69
LIG3-208ENST00000586407 SDF2L1Q9HCN8 221 aa19.39■□□□□ 0.69
LIG3-208ENST00000586407 MRPS16Q9Y3D3 137 aaKnown RBP19.39■□□□□ 0.69
LIG3-208ENST00000586407 GCGP01275 180 aa19.38■□□□□ 0.69
LIG3-208ENST00000586407 RASL10AQ92737 203 aa19.38■□□□□ 0.69
LIG3-208ENST00000586407 PRO0255Q9UI72 69 aa19.38■□□□□ 0.69
LIG3-208ENST00000586407 HHLA3Q9XRX5 114 aa19.38■□□□□ 0.69
LIG3-208ENST00000586407 ICOSQ9Y6W8 199 aa19.38■□□□□ 0.69
LIG3-208ENST00000586407 TRGV4A0A0C4DH28 118 aa19.37■□□□□ 0.69
LIG3-208ENST00000586407 A0A1W2PRE2 83 aa19.37■□□□□ 0.69
LIG3-208ENST00000586407 C6orf223Q8N319 242 aa19.37■□□□□ 0.69
LIG3-208ENST00000586407 MAP1LC3B2A6NCE7 125 aa19.36■□□□□ 0.69
LIG3-208ENST00000586407 IFNA7P01567 189 aa19.36■□□□□ 0.69
LIG3-208ENST00000586407 KCNRGQ8N5I3 272 aa19.36■□□□□ 0.69
LIG3-208ENST00000586407 UPK3BQ9BT76 320 aa19.36■□□□□ 0.69
LIG3-208ENST00000586407 MAP1LC3BQ9GZQ8 125 aa19.36■□□□□ 0.69
LIG3-208ENST00000586407 FHITP49789 147 aa19.35■□□□□ 0.69
LIG3-208ENST00000586407 TNP2Q05952 138 aa19.35■□□□□ 0.69
LIG3-208ENST00000586407 FAM74A7A6NL05 159 aa19.34■□□□□ 0.69
LIG3-208ENST00000586407 M0R2P5 195 aa19.34■□□□□ 0.69
LIG3-208ENST00000586407 KCNS1Q96KK3 526 aa19.34■□□□□ 0.69
LIG3-208ENST00000586407 SMUG1Q53HV7 270 aa19.33■□□□□ 0.68
LIG3-208ENST00000586407 PEX7O00628 323 aa19.32■□□□□ 0.68
LIG3-208ENST00000586407 TRAV4A0A0B4J268 109 aa19.31■□□□□ 0.68
LIG3-208ENST00000586407 C9JCJ5 164 aa19.31■□□□□ 0.68
LIG3-208ENST00000586407 PFN1P07737 140 aaKnown RBP19.31■□□□□ 0.68
LIG3-208ENST00000586407 SLAQ13239 276 aa19.31■□□□□ 0.68
LIG3-208ENST00000586407 ZNF345Q14585 488 aa19.31■□□□□ 0.68
LIG3-208ENST00000586407 ZFP69Q49AA0 526 aa19.31■□□□□ 0.68
LIG3-208ENST00000586407 OR4C5Q8NGB2 326 aa19.31■□□□□ 0.68
LIG3-208ENST00000586407 ARL2-SNX15V9GYD0 113 aa19.31■□□□□ 0.68
LIG3-208ENST00000586407 PKD1P98161 4303 aa19.3■□□□□ 0.68
LIG3-208ENST00000586407 GYPEP15421 78 aa19.29■□□□□ 0.68
LIG3-208ENST00000586407 Q86TA4 180 aa19.29■□□□□ 0.68
LIG3-208ENST00000586407 LOC100131303A0A0U1RQF7 123 aa19.28■□□□□ 0.68
LIG3-208ENST00000586407 A0A1B0GV50 99 aa19.28■□□□□ 0.68
LIG3-208ENST00000586407 HMSDA8MTL9 139 aa19.28■□□□□ 0.68
LIG3-208ENST00000586407 NXPH4O95158 308 aa19.28■□□□□ 0.68
LIG3-208ENST00000586407 MRPL23Q16540 153 aaKnown RBP19.28■□□□□ 0.68
LIG3-208ENST00000586407 TTC32Q5I0X7 151 aa19.28■□□□□ 0.68
LIG3-208ENST00000586407 SAPCD1Q5SSQ6 148 aa19.28■□□□□ 0.68
LIG3-208ENST00000586407 ZNF575Q86XF7 245 aa19.28■□□□□ 0.68
LIG3-208ENST00000586407 ZNF471Q9BX82 626 aaPredicted RBP19.28■□□□□ 0.68
LIG3-208ENST00000586407 PKHD1P08F94 4074 aa19.28■□□□□ 0.68
LIG3-208ENST00000586407 K7EQD1 137 aa19.27■□□□□ 0.68
LIG3-208ENST00000586407 BCL2L11O43521 198 aa19.27■□□□□ 0.68
LIG3-208ENST00000586407 LYPD5Q6UWN5 251 aa19.27■□□□□ 0.68
LIG3-208ENST00000586407 DPPA3Q6W0C5 159 aa19.27■□□□□ 0.68
LIG3-208ENST00000586407 FBLL1A6NHQ2 334 aaKnown RBP19.26■□□□□ 0.67
LIG3-208ENST00000586407 PPT1P50897 306 aa19.26■□□□□ 0.67
LIG3-208ENST00000586407 ZNF876PQ49A33 203 aa19.26■□□□□ 0.67
LIG3-208ENST00000586407 FAM213BQ8TBF2 198 aa19.26■□□□□ 0.67
LIG3-208ENST00000586407 C9orf85Q96MD7 179 aa19.26■□□□□ 0.67
LIG3-208ENST00000586407 SRIP30626 198 aa19.25■□□□□ 0.67
LIG3-208ENST00000586407 CST9LP1Q5W188 147 aa19.25■□□□□ 0.67
LIG3-208ENST00000586407 NEGR1Q7Z3B1 354 aa19.25■□□□□ 0.67
LIG3-208ENST00000586407 PCNPQ8WW12 178 aaKnown RBP19.25■□□□□ 0.67
LIG3-208ENST00000586407 IGKV3D-20A0A0C4DH25 116 aa19.24■□□□□ 0.67
LIG3-208ENST00000586407 A0A0D9SG52 128 aa19.24■□□□□ 0.67
LIG3-208ENST00000586407 KANTRA0A1W2PQU2 76 aa19.24■□□□□ 0.67
LIG3-208ENST00000586407 RNASE3P12724 160 aaKnown RBP19.24■□□□□ 0.67
LIG3-208ENST00000586407 STOML3Q8TAV4 291 aa19.24■□□□□ 0.67
LIG3-208ENST00000586407 IGHV3-73A0A0B4J1V6 119 aa19.23■□□□□ 0.67
LIG3-208ENST00000586407 PGPEP1LA6NFU8 196 aa19.23■□□□□ 0.67
LIG3-208ENST00000586407 SIVA1O15304 175 aa19.23■□□□□ 0.67
LIG3-208ENST00000586407 SEC11BP0C7V7 166 aa19.23■□□□□ 0.67
LIG3-208ENST00000586407 HIST1H2BAQ96A08 127 aa19.23■□□□□ 0.67
LIG3-208ENST00000586407 ZC2HC1AQ96GY0 325 aa19.23■□□□□ 0.67
LIG3-208ENST00000586407 NKX6-2Q9C056 277 aaPredicted RBP19.23■□□□□ 0.67
LIG3-208ENST00000586407 DNAH11Q96DT5 4516 aa19.23■□□□□ 0.67
LIG3-208ENST00000586407 KIAA1109Q2LD37 5005 aa19.23■□□□□ 0.67
LIG3-208ENST00000586407 HERC2O95714 4834 aa19.22■□□□□ 0.67
LIG3-208ENST00000586407 GATA1P15976 413 aaPredicted RBP19.22■□□□□ 0.67
LIG3-208ENST00000586407 ZNF506Q5JVG8 444 aa19.22■□□□□ 0.67
LIG3-208ENST00000586407 SFT2D1Q8WV19 159 aa19.22■□□□□ 0.67
LIG3-208ENST00000586407 DYNC1H1Q14204 4646 aaKnown RBP19.21■□□□□ 0.67
LIG3-208ENST00000586407 RS1O15537 224 aa19.21■□□□□ 0.67
LIG3-208ENST00000586407 PAGE4O60829 102 aa19.21■□□□□ 0.67
LIG3-208ENST00000586407 CRIP1P50238 77 aa19.21■□□□□ 0.67
LIG3-208ENST00000586407 CFAP126Q5VTH2 177 aa19.21■□□□□ 0.67
LIG3-208ENST00000586407 TMUB2Q71RG4 321 aa19.21■□□□□ 0.67
LIG3-208ENST00000586407 A0A1W2PPQ1 181 aa19.2■□□□□ 0.66
LIG3-208ENST00000586407 ORM1P02763 201 aa19.2■□□□□ 0.66
LIG3-208ENST00000586407 FABP5P3A8MUU1 101 aa19.19■□□□□ 0.66
LIG3-208ENST00000586407 PFDN1O60925 122 aa19.19■□□□□ 0.66
LIG3-208ENST00000586407 LINC00315P59091 139 aa19.19■□□□□ 0.66
LIG3-208ENST00000586407 UBE2G1P62253 170 aa19.19■□□□□ 0.66
LIG3-208ENST00000586407 WFDC10BQ8IUB3 73 aa19.19■□□□□ 0.66
LIG3-208ENST00000586407 MBD3L1Q8WWY6 194 aa19.19■□□□□ 0.66
LIG3-208ENST00000586407 M0R036 132 aa19.18■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 70.3 ms