RNA–Protein interactions for RNA: ENST00000585428.1

SDF2-202, Transcript of stromal cell derived factor 2, humanhuman

TSL 1 (best)

Gene SDF2, Length 924 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDF2-202ENST00000585428 H0YIZ8 118 aa9.65□□□□□ -0.86
SDF2-202ENST00000585428 PSCAO43653 123 aa9.65□□□□□ -0.86
SDF2-202ENST00000585428 C1QBP02746 253 aa9.65□□□□□ -0.86
SDF2-202ENST00000585428 TVP23CQ96ET8 276 aa9.65□□□□□ -0.86
SDF2-202ENST00000585428 OR5AC2Q9NZP5 309 aa9.65□□□□□ -0.86
SDF2-202ENST00000585428 FLG2Q5D862 2391 aaPredicted RBP9.64□□□□□ -0.87
SDF2-202ENST00000585428 PFN1P07737 140 aaKnown RBP9.64□□□□□ -0.87
SDF2-202ENST00000585428 LCE2CQ5TA81 110 aa9.64□□□□□ -0.87
SDF2-202ENST00000585428 NMES1Q9C002 83 aa9.64□□□□□ -0.87
SDF2-202ENST00000585428 KCNIP2Q9NS61 270 aa9.64□□□□□ -0.87
SDF2-202ENST00000585428 FAM240BA0A1B0GVZ2 78 aa9.63□□□□□ -0.87
SDF2-202ENST00000585428 PGPA6NDG6 321 aa9.63□□□□□ -0.87
SDF2-202ENST00000585428 C17orf112F2Z3M2 114 aa9.63□□□□□ -0.87
SDF2-202ENST00000585428 SIX6O95475 246 aa9.63□□□□□ -0.87
SDF2-202ENST00000585428 ARL6IP6Q8N6S5 226 aa9.63□□□□□ -0.87
SDF2-202ENST00000585428 SLC25A29Q8N8R3 303 aa9.63□□□□□ -0.87
SDF2-202ENST00000585428 HYLS1Q96M11 299 aa9.63□□□□□ -0.87
SDF2-202ENST00000585428 NAGKQ9UJ70 344 aa9.63□□□□□ -0.87
SDF2-202ENST00000585428 TRAV8-6A0A0B4J262 113 aa9.62□□□□□ -0.87
SDF2-202ENST00000585428 TRAV21A0A0B4J279 112 aa9.62□□□□□ -0.87
SDF2-202ENST00000585428 TYMSP04818 313 aa9.62□□□□□ -0.87
SDF2-202ENST00000585428 UBE2L3P68036 154 aaKnown RBP9.62□□□□□ -0.87
SDF2-202ENST00000585428 NHLRC2Q8NBF2 726 aa9.62□□□□□ -0.87
SDF2-202ENST00000585428 CCDC32Q9BV29 185 aa9.62□□□□□ -0.87
SDF2-202ENST00000585428 OTORQ9NRC9 128 aa9.62□□□□□ -0.87
SDF2-202ENST00000585428 MBD2Q9UBB5 411 aa9.62□□□□□ -0.87
SDF2-202ENST00000585428 TRBV6-4A0A1B0GX49 114 aa9.61□□□□□ -0.87
SDF2-202ENST00000585428 CIDEAO60543 219 aa9.61□□□□□ -0.87
SDF2-202ENST00000585428 PPT1P50897 306 aa9.61□□□□□ -0.87
SDF2-202ENST00000585428 KHDC3LQ587J8 217 aa9.61□□□□□ -0.87
SDF2-202ENST00000585428 FFAR4Q5NUL3 377 aa9.61□□□□□ -0.87
SDF2-202ENST00000585428 LCE2AQ5TA79 106 aaPredicted RBP9.61□□□□□ -0.87
SDF2-202ENST00000585428 CFAP126Q5VTH2 177 aa9.61□□□□□ -0.87
SDF2-202ENST00000585428 Q6ZSA8 131 aa9.61□□□□□ -0.87
SDF2-202ENST00000585428 KCNS1Q96KK3 526 aa9.61□□□□□ -0.87
SDF2-202ENST00000585428 FBLL1A6NHQ2 334 aaKnown RBP9.6□□□□□ -0.87
SDF2-202ENST00000585428 KRTAP29-1A8MX34 341 aaPredicted RBP9.6□□□□□ -0.87
SDF2-202ENST00000585428 RS1O15537 224 aa9.6□□□□□ -0.87
SDF2-202ENST00000585428 TAS2R45P59539 299 aa9.6□□□□□ -0.87
SDF2-202ENST00000585428 CYCSP99999 105 aaKnown RBP9.6□□□□□ -0.87
SDF2-202ENST00000585428 LRRC37A5PQ49AS3 106 aa9.6□□□□□ -0.87
SDF2-202ENST00000585428 LELP1Q5T871 98 aa9.6□□□□□ -0.87
SDF2-202ENST00000585428 DPPA3Q6W0C5 159 aa9.6□□□□□ -0.87
SDF2-202ENST00000585428 ATP5SQ99766 215 aa9.6□□□□□ -0.87
SDF2-202ENST00000585428 Q9HAA7 133 aa9.6□□□□□ -0.87
SDF2-202ENST00000585428 SDF2L1Q9HCN8 221 aa9.6□□□□□ -0.87
SDF2-202ENST00000585428 TREM1Q9NP99 234 aa9.6□□□□□ -0.87
SDF2-202ENST00000585428 TRAV8-1A0A0A6YYK1 113 aa9.59□□□□□ -0.87
SDF2-202ENST00000585428 IGHV3-30P01768 117 aa9.59□□□□□ -0.87
SDF2-202ENST00000585428 IGHV3-33P01772 117 aa9.59□□□□□ -0.87
SDF2-202ENST00000585428 IGHV3-30-3P0DP02 117 aa9.59□□□□□ -0.87
SDF2-202ENST00000585428 IGHV3-30-5P0DP03 117 aa9.59□□□□□ -0.87
SDF2-202ENST00000585428 ZNF876PQ49A33 203 aa9.59□□□□□ -0.87
SDF2-202ENST00000585428 OR10J3Q5JRS4 329 aa9.59□□□□□ -0.87
SDF2-202ENST00000585428 FAM74A1Q5RGS3 127 aa9.59□□□□□ -0.87
SDF2-202ENST00000585428 MZT2BQ6NZ67 158 aa9.59□□□□□ -0.87
SDF2-202ENST00000585428 GOLT1AQ6ZVE7 132 aa9.59□□□□□ -0.87
SDF2-202ENST00000585428 CMTM2Q8TAZ6 248 aa9.59□□□□□ -0.87
SDF2-202ENST00000585428 ASB13Q8WXK3 278 aa9.59□□□□□ -0.87
SDF2-202ENST00000585428 PTH2Q96A98 100 aa9.59□□□□□ -0.87
SDF2-202ENST00000585428 PRADC1Q9BSG0 188 aa9.59□□□□□ -0.87
SDF2-202ENST00000585428 GTSF1LQ9H1H1 148 aa9.59□□□□□ -0.87
SDF2-202ENST00000585428 EIF3GO75821 320 aaKnown RBP eCLIP9.58□□□□□ -0.88
SDF2-202ENST00000585428 PLA2G1BP04054 148 aaKnown RBP9.58□□□□□ -0.88
SDF2-202ENST00000585428 H2BFSP57053 126 aa9.58□□□□□ -0.88
SDF2-202ENST00000585428 ASAH1Q13510 395 aa9.58□□□□□ -0.88
SDF2-202ENST00000585428 WFDC2Q14508 124 aa9.58□□□□□ -0.88
SDF2-202ENST00000585428 LAGE3Q14657 143 aa9.58□□□□□ -0.88
SDF2-202ENST00000585428 C11orf21Q9P2W6 132 aa9.58□□□□□ -0.88
SDF2-202ENST00000585428 F6UZH7 168 aa9.57□□□□□ -0.88
SDF2-202ENST00000585428 ZNF80P51504 273 aaPredicted RBP9.57□□□□□ -0.88
SDF2-202ENST00000585428 RHOHQ15669 191 aa9.57□□□□□ -0.88
SDF2-202ENST00000585428 PQLC2Q6ZP29 291 aa9.57□□□□□ -0.88
SDF2-202ENST00000585428 ATP6V0E2Q8NHE4 81 aa9.57□□□□□ -0.88
SDF2-202ENST00000585428 SCGB1C1Q8TD33 95 aa9.57□□□□□ -0.88
SDF2-202ENST00000585428 PPP1R1CQ8WVI7 109 aa9.57□□□□□ -0.88
SDF2-202ENST00000585428 TM2D2Q9BX73 214 aa9.57□□□□□ -0.88
SDF2-202ENST00000585428 RPH3ALQ9UNE2 315 aa9.57□□□□□ -0.88
SDF2-202ENST00000585428 HSPB11Q9Y547 144 aa9.57□□□□□ -0.88
SDF2-202ENST00000585428 IGHV3-73A0A0B4J1V6 119 aa9.56□□□□□ -0.88
SDF2-202ENST00000585428 PGPEP1LA6NFU8 196 aa9.56□□□□□ -0.88
SDF2-202ENST00000585428 DEFB104AQ8WTQ1 72 aa9.56□□□□□ -0.88
SDF2-202ENST00000585428 C9orf85Q96MD7 179 aa9.56□□□□□ -0.88
SDF2-202ENST00000585428 NDUFA13Q9P0J0 144 aa9.56□□□□□ -0.88
SDF2-202ENST00000585428 TAAR5O14804 337 aa9.55□□□□□ -0.88
SDF2-202ENST00000585428 MPC2O95563 127 aa9.55□□□□□ -0.88
SDF2-202ENST00000585428 MGST1P10620 155 aaKnown RBP9.55□□□□□ -0.88
SDF2-202ENST00000585428 GNG5P63218 68 aa9.55□□□□□ -0.88
SDF2-202ENST00000585428 LINC00299Q6ZSB3 139 aa9.55□□□□□ -0.88
SDF2-202ENST00000585428 Q8N3U1 123 aa9.55□□□□□ -0.88
SDF2-202ENST00000585428 SGK494Q96LW2 274 aa9.55□□□□□ -0.88
SDF2-202ENST00000585428 WFDC1Q9HC57 220 aa9.55□□□□□ -0.88
SDF2-202ENST00000585428 DNAH8Q96JB1 4490 aa9.54□□□□□ -0.88
SDF2-202ENST00000585428 TRAV8-3A0A0A6YYJ7 113 aa9.54□□□□□ -0.88
SDF2-202ENST00000585428 A0A1W2PPV4 95 aa9.54□□□□□ -0.88
SDF2-202ENST00000585428 RNASE3P12724 160 aaKnown RBP9.54□□□□□ -0.88
SDF2-202ENST00000585428 RPL12P30050 165 aaKnown RBP9.54□□□□□ -0.88
SDF2-202ENST00000585428 ACOT6Q3I5F7 207 aaPredicted RBP9.54□□□□□ -0.88
SDF2-202ENST00000585428 SMIM3Q9BZL3 60 aa9.54□□□□□ -0.88
SDF2-202ENST00000585428 SERTM2A0A1B0GWG4 89 aa9.53□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 95.1 ms