RNA–Protein interactions for RNA: ENST00000585395.6

LSM7-202, Transcript of LSM7 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 3

Gene LSM7, Length 621 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM7-202ENST00000585395 C8orf49Q96NF6 230 aa16.48■□□□□ 0.23
LSM7-202ENST00000585395 LTAP01374 205 aa16.47■□□□□ 0.23
LSM7-202ENST00000585395 PRM2P04554 102 aa16.47■□□□□ 0.23
LSM7-202ENST00000585395 TDRG1Q3Y452 100 aa16.47■□□□□ 0.23
LSM7-202ENST00000585395 MUC21Q5SSG8 566 aa16.47■□□□□ 0.23
LSM7-202ENST00000585395 SDF2L1Q9HCN8 221 aa16.47■□□□□ 0.23
LSM7-202ENST00000585395 DEFB131BA0A096LNP1 70 aa16.46■□□□□ 0.23
LSM7-202ENST00000585395 RBFOX3A6NFN3 312 aa16.46■□□□□ 0.23
LSM7-202ENST00000585395 FABP5P3A8MUU1 101 aa16.46■□□□□ 0.23
LSM7-202ENST00000585395 TCTAP57738 103 aa16.46■□□□□ 0.23
LSM7-202ENST00000585395 C12orf74Q32Q52 190 aa16.46■□□□□ 0.23
LSM7-202ENST00000585395 TMEM183AQ8IXX5 376 aa16.46■□□□□ 0.23
LSM7-202ENST00000585395 MED9Q9NWA0 146 aa16.46■□□□□ 0.23
LSM7-202ENST00000585395 KMT2AQ03164 3969 aa16.45■□□□□ 0.22
LSM7-202ENST00000585395 DAZ2Q13117 558 aaKnown RBP16.45■□□□□ 0.22
LSM7-202ENST00000585395 COX8CQ7Z4L0 72 aa16.45■□□□□ 0.22
LSM7-202ENST00000585395 BAGE2Q86Y30 109 aa16.45■□□□□ 0.22
LSM7-202ENST00000585395 NOP10Q9NPE3 64 aaKnown RBP16.45■□□□□ 0.22
LSM7-202ENST00000585395 KIAA1109Q2LD37 5005 aa16.45■□□□□ 0.22
LSM7-202ENST00000585395 PLAC8L1A1L4L8 177 aa16.44■□□□□ 0.22
LSM7-202ENST00000585395 TCL1AP56279 114 aa16.44■□□□□ 0.22
LSM7-202ENST00000585395 HECTD4Q9Y4D8 3996 aa16.44■□□□□ 0.22
LSM7-202ENST00000585395 RPL35P42766 123 aaKnown RBP16.43■□□□□ 0.22
LSM7-202ENST00000585395 RAB14P61106 215 aa16.43■□□□□ 0.22
LSM7-202ENST00000585395 ZNF506Q5JVG8 444 aa16.43■□□□□ 0.22
LSM7-202ENST00000585395 FAM162BQ5T6X4 162 aa16.43■□□□□ 0.22
LSM7-202ENST00000585395 EIF5A2Q9GZV4 153 aaKnown RBP16.43■□□□□ 0.22
LSM7-202ENST00000585395 GSN-AS1Q9NRJ2 163 aa16.43■□□□□ 0.22
LSM7-202ENST00000585395 DEFB130BP0DP73 79 aa16.42■□□□□ 0.22
LSM7-202ENST00000585395 DEFB130AP0DP74 79 aa16.42■□□□□ 0.22
LSM7-202ENST00000585395 HTN3P15516 51 aa16.42■□□□□ 0.22
LSM7-202ENST00000585395 ZNF80P51504 273 aaPredicted RBP16.42■□□□□ 0.22
LSM7-202ENST00000585395 C11orf72Q8NBR9 251 aa16.42■□□□□ 0.22
LSM7-202ENST00000585395 SMIM12Q96EX1 92 aa16.42■□□□□ 0.22
LSM7-202ENST00000585395 SPXQ9BT56 116 aa16.42■□□□□ 0.22
LSM7-202ENST00000585395 IGHV4-4A0A075B6R2 117 aa16.41■□□□□ 0.22
LSM7-202ENST00000585395 TMEM250H0YL14 139 aa16.41■□□□□ 0.22
LSM7-202ENST00000585395 NDUFS6O75380 124 aaKnown RBP16.41■□□□□ 0.22
LSM7-202ENST00000585395 LGALS9CQ6DKI2 356 aa16.41■□□□□ 0.22
LSM7-202ENST00000585395 Q6ZQT7 251 aa16.41■□□□□ 0.22
LSM7-202ENST00000585395 ZC2HC1AQ96GY0 325 aa16.41■□□□□ 0.22
LSM7-202ENST00000585395 DNAH10Q8IVF4 4471 aa16.41■□□□□ 0.22
LSM7-202ENST00000585395 GNG4P50150 75 aa16.4■□□□□ 0.22
LSM7-202ENST00000585395 TOR2AQ5JU69 321 aa16.4■□□□□ 0.22
LSM7-202ENST00000585395 FAM210AQ96ND0 272 aa16.4■□□□□ 0.22
LSM7-202ENST00000585395 BIN3Q9NQY0 253 aa16.4■□□□□ 0.22
LSM7-202ENST00000585395 TP53TG3Q9ULZ0 132 aa16.4■□□□□ 0.22
LSM7-202ENST00000585395 LGALS9BQ3B8N2 356 aa16.39■□□□□ 0.21
LSM7-202ENST00000585395 APLNQ9ULZ1 77 aa16.39■□□□□ 0.21
LSM7-202ENST00000585395 ORM1P02763 201 aa16.38■□□□□ 0.21
LSM7-202ENST00000585395 TYMSP04818 313 aa16.38■□□□□ 0.21
LSM7-202ENST00000585395 ATP5G1P05496 136 aa16.38■□□□□ 0.21
LSM7-202ENST00000585395 ZNF674Q2M3X9 581 aa16.38■□□□□ 0.21
LSM7-202ENST00000585395 CENPWQ5EE01 88 aa16.38■□□□□ 0.21
LSM7-202ENST00000585395 NDUFAF3Q9BU61 184 aa16.38■□□□□ 0.21
LSM7-202ENST00000585395 TRGV1A0A0A0MS02 117 aa16.37■□□□□ 0.21
LSM7-202ENST00000585395 SPINK4O60575 86 aa16.37■□□□□ 0.21
LSM7-202ENST00000585395 SH2D1AO60880 128 aa16.37■□□□□ 0.21
LSM7-202ENST00000585395 FAM210BQ96KR6 192 aa16.37■□□□□ 0.21
LSM7-202ENST00000585395 DERL1Q9BUN8 251 aa16.37■□□□□ 0.21
LSM7-202ENST00000585395 MLST8Q9BVC4 326 aa16.37■□□□□ 0.21
LSM7-202ENST00000585395 TRGV2A0A075B6R0 118 aa16.36■□□□□ 0.21
LSM7-202ENST00000585395 IGHV3-16A0A0C4DH30 117 aa16.36■□□□□ 0.21
LSM7-202ENST00000585395 GAGE12BA1L429 117 aa16.36■□□□□ 0.21
LSM7-202ENST00000585395 B4DEV8 164 aa16.36■□□□□ 0.21
LSM7-202ENST00000585395 GNRH2O43555 120 aa16.36■□□□□ 0.21
LSM7-202ENST00000585395 GAGE7O76087 117 aa16.36■□□□□ 0.21
LSM7-202ENST00000585395 GAGE12FP0CL80 117 aa16.36■□□□□ 0.21
LSM7-202ENST00000585395 GAGE12GP0CL81 117 aa16.36■□□□□ 0.21
LSM7-202ENST00000585395 GAGE12IP0CL82 117 aa16.36■□□□□ 0.21
LSM7-202ENST00000585395 S100A4P26447 101 aaKnown RBP16.36■□□□□ 0.21
LSM7-202ENST00000585395 LINC00612Q8N6U2 182 aa16.36■□□□□ 0.21
LSM7-202ENST00000585395 NHLRC2Q8NBF2 726 aa16.36■□□□□ 0.21
LSM7-202ENST00000585395 MDFICQ9P1T7 246 aa16.36■□□□□ 0.21
LSM7-202ENST00000585395 ASIPP42127 132 aa16.35■□□□□ 0.21
LSM7-202ENST00000585395 MGST1P10620 155 aaKnown RBP16.34■□□□□ 0.21
LSM7-202ENST00000585395 PEA15Q15121 130 aa16.34■□□□□ 0.21
LSM7-202ENST00000585395 DAZAP1Q96EP5 407 aaKnown RBP16.34■□□□□ 0.21
LSM7-202ENST00000585395 C18orf15Q96N68 181 aa16.34■□□□□ 0.21
LSM7-202ENST00000585395 SMDT1Q9H4I9 107 aa16.34■□□□□ 0.21
LSM7-202ENST00000585395 C11orf21Q9P2W6 132 aa16.34■□□□□ 0.21
LSM7-202ENST00000585395 RAB19A4D1S5 217 aa16.33■□□□□ 0.2
LSM7-202ENST00000585395 C9JCJ5 164 aa16.33■□□□□ 0.2
LSM7-202ENST00000585395 M0R2P5 195 aa16.33■□□□□ 0.2
LSM7-202ENST00000585395 CRIP1P50238 77 aa16.33■□□□□ 0.2
LSM7-202ENST00000585395 OR5I1Q13606 314 aa16.33■□□□□ 0.2
LSM7-202ENST00000585395 LINC01559Q495D7 138 aa16.33■□□□□ 0.2
LSM7-202ENST00000585395 PRR27Q6MZM9 219 aa16.33■□□□□ 0.2
LSM7-202ENST00000585395 Q6ZTI0 123 aa16.33■□□□□ 0.2
LSM7-202ENST00000585395 CEBPGP53567 150 aa16.32■□□□□ 0.2
LSM7-202ENST00000585395 PCNPQ8WW12 178 aaKnown RBP16.32■□□□□ 0.2
LSM7-202ENST00000585395 PARLQ9H300 379 aa16.32■□□□□ 0.2
LSM7-202ENST00000585395 MRPL16Q9NX20 251 aaKnown RBP16.32■□□□□ 0.2
LSM7-202ENST00000585395 IGKV3D-20A0A0C4DH25 116 aa16.31■□□□□ 0.2
LSM7-202ENST00000585395 KRBOX1C9JBD0 128 aa16.31■□□□□ 0.2
LSM7-202ENST00000585395 F5H768 121 aa16.31■□□□□ 0.2
LSM7-202ENST00000585395 M0R036 132 aa16.31■□□□□ 0.2
LSM7-202ENST00000585395 RASL10AQ92737 203 aa16.3■□□□□ 0.2
LSM7-202ENST00000585395 CXCL1P09341 107 aa16.29■□□□□ 0.2
LSM7-202ENST00000585395 DNLZQ5SXM8 178 aa16.29■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 71.5 ms