RNA–Protein interactions for RNA: ENST00000584655.5

RFFL-212, Transcript of ring finger and FYVE like domain containing E3 ubiquitin protein ligase, humanhuman

TSL 2 BASIC

Gene RFFL, Length 4,039 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFFL-212ENST00000584655 IGLV2-11P01706 119 aa7.83□□□□□ -1.16
RFFL-212ENST00000584655 IGHG2P01859 326 aa7.83□□□□□ -1.16
RFFL-212ENST00000584655 CFHR3Q02985 330 aa7.83□□□□□ -1.16
RFFL-212ENST00000584655 FA2HQ7L5A8 372 aa7.83□□□□□ -1.16
RFFL-212ENST00000584655 RAB37Q96AX2 223 aa7.83□□□□□ -1.16
RFFL-212ENST00000584655 C11orf21Q9P2W6 132 aa7.83□□□□□ -1.16
RFFL-212ENST00000584655 UQCR10Q9UDW1 63 aa7.83□□□□□ -1.16
RFFL-212ENST00000584655 TP53TG3Q9ULZ0 132 aa7.83□□□□□ -1.16
RFFL-212ENST00000584655 IFI27P40305 119 aaPredicted RBP7.83□□□□□ -1.16
RFFL-212ENST00000584655 NIT1Q86X76 327 aa7.83□□□□□ -1.16
RFFL-212ENST00000584655 DAZ1Q9NQZ3 744 aaKnown RBP7.83□□□□□ -1.16
RFFL-212ENST00000584655 TRBV7-1A0A0A6YYK4 115 aa7.83□□□□□ -1.16
RFFL-212ENST00000584655 IGHV3-16A0A0C4DH30 117 aa7.83□□□□□ -1.16
RFFL-212ENST00000584655 NUDT3O95989 172 aa7.83□□□□□ -1.16
RFFL-212ENST00000584655 CD28P10747 220 aa7.83□□□□□ -1.16
RFFL-212ENST00000584655 CITED2Q99967 270 aaPredicted RBP7.83□□□□□ -1.16
RFFL-212ENST00000584655 ESM1Q9NQ30 184 aa7.83□□□□□ -1.16
RFFL-212ENST00000584655 PHLDA3Q9Y5J5 127 aa7.82□□□□□ -1.16
RFFL-212ENST00000584655 A0A0G2JLM5 398 aa7.82□□□□□ -1.16
RFFL-212ENST00000584655 M0QZK8 103 aa7.82□□□□□ -1.16
RFFL-212ENST00000584655 ZNF324O75467 553 aaPredicted RBP7.82□□□□□ -1.16
RFFL-212ENST00000584655 LTAP01374 205 aa7.82□□□□□ -1.16
RFFL-212ENST00000584655 PSG9Q00887 426 aa7.82□□□□□ -1.16
RFFL-212ENST00000584655 PSMG3-AS1Q96PY0 264 aa7.82□□□□□ -1.16
RFFL-212ENST00000584655 DNAJC9-AS1A6NH13 148 aa7.82□□□□□ -1.16
RFFL-212ENST00000584655 EBI3Q14213 229 aa7.82□□□□□ -1.16
RFFL-212ENST00000584655 C18orf32Q8TCD1 76 aa7.81□□□□□ -1.16
RFFL-212ENST00000584655 PKD1L1Q8TDX9 2849 aa7.81□□□□□ -1.16
RFFL-212ENST00000584655 A0A1W2PS18 150 aa7.81□□□□□ -1.16
RFFL-212ENST00000584655 SAP30O75446 220 aa7.81□□□□□ -1.16
RFFL-212ENST00000584655 DLX4Q92988 240 aaPredicted RBP7.81□□□□□ -1.16
RFFL-212ENST00000584655 PYGO2Q9BRQ0 406 aa7.81□□□□□ -1.16
RFFL-212ENST00000584655 FABP5P3A8MUU1 101 aa7.81□□□□□ -1.16
RFFL-212ENST00000584655 HLA-DQA1P01909 254 aa7.81□□□□□ -1.16
RFFL-212ENST00000584655 OR5AL1P0C617 328 aa7.81□□□□□ -1.16
RFFL-212ENST00000584655 ZNF256Q9Y2P7 627 aaPredicted RBP7.81□□□□□ -1.16
RFFL-212ENST00000584655 IGHG4P01861 327 aa7.81□□□□□ -1.16
RFFL-212ENST00000584655 ANXA2RQ3ZCQ2 193 aa7.81□□□□□ -1.16
RFFL-212ENST00000584655 TRAV8-2A0A0B4J237 113 aa7.8□□□□□ -1.16
RFFL-212ENST00000584655 MPV17L2Q567V2 206 aa7.8□□□□□ -1.16
RFFL-212ENST00000584655 MBD6Q96DN6 1003 aa7.8□□□□□ -1.16
RFFL-212ENST00000584655 MS4A6AQ9H2W1 248 aa7.8□□□□□ -1.16
RFFL-212ENST00000584655 OR4C46A6NHA9 309 aa7.8□□□□□ -1.16
RFFL-212ENST00000584655 MT-ND6P03923 174 aa7.8□□□□□ -1.16
RFFL-212ENST00000584655 FCER1GP30273 86 aa7.8□□□□□ -1.16
RFFL-212ENST00000584655 RIGQ13278 110 aa7.8□□□□□ -1.16
RFFL-212ENST00000584655 TMEM61Q8N0U2 210 aa7.8□□□□□ -1.16
RFFL-212ENST00000584655 PRELID3AQ96N28 172 aa7.8□□□□□ -1.16
RFFL-212ENST00000584655 INS-IGF2F8WCM5 200 aa7.79□□□□□ -1.16
RFFL-212ENST00000584655 LEPROTL1O95214 131 aa7.79□□□□□ -1.16
RFFL-212ENST00000584655 MYCNOSP40205 109 aa7.79□□□□□ -1.16
RFFL-212ENST00000584655 SMIM27A0A1W2PRY6 76 aa7.79□□□□□ -1.16
RFFL-212ENST00000584655 LINC00310P59036 64 aa7.79□□□□□ -1.16
RFFL-212ENST00000584655 MEGF9Q9H1U4 602 aa7.79□□□□□ -1.16
RFFL-212ENST00000584655 TRBV9A0A0B4J1U6 114 aa7.79□□□□□ -1.16
RFFL-212ENST00000584655 K7EMI3 77 aa7.79□□□□□ -1.16
RFFL-212ENST00000584655 DEFB4AO15263 64 aa7.79□□□□□ -1.16
RFFL-212ENST00000584655 PRSS1P07477 247 aa7.79□□□□□ -1.16
RFFL-212ENST00000584655 DSCR9P59020 149 aa7.79□□□□□ -1.16
RFFL-212ENST00000584655 Q6ZSV7 163 aa7.79□□□□□ -1.16
RFFL-212ENST00000584655 AKAP9Q99996 3911 aa7.78□□□□□ -1.16
RFFL-212ENST00000584655 A0A087X0K7 114 aa7.78□□□□□ -1.16
RFFL-212ENST00000584655 ZC2HC1BQ5TFG8 222 aa7.78□□□□□ -1.16
RFFL-212ENST00000584655 EBLN2Q6P2I7 272 aa7.78□□□□□ -1.16
RFFL-212ENST00000584655 IGKV3D-20A0A0C4DH25 116 aa7.78□□□□□ -1.16
RFFL-212ENST00000584655 IGHV7-4-1A0A0J9YVY3 117 aa7.78□□□□□ -1.16
RFFL-212ENST00000584655 NPYP01303 97 aa7.78□□□□□ -1.16
RFFL-212ENST00000584655 COA6Q5JTJ3 125 aaKnown RBP7.78□□□□□ -1.16
RFFL-212ENST00000584655 FAM159AQ6UWV7 190 aa7.78□□□□□ -1.16
RFFL-212ENST00000584655 MLST8Q9BVC4 326 aa7.78□□□□□ -1.16
RFFL-212ENST00000584655 MRPS12O15235 138 aaKnown RBP7.78□□□□□ -1.16
RFFL-212ENST00000584655 TYMSP04818 313 aa7.78□□□□□ -1.16
RFFL-212ENST00000584655 RNASE8Q8TDE3 154 aaKnown RBP7.78□□□□□ -1.16
RFFL-212ENST00000584655 TTTY13Q9BZ97 58 aa7.78□□□□□ -1.16
RFFL-212ENST00000584655 ZNF702PQ9H963 129 aa7.78□□□□□ -1.16
RFFL-212ENST00000584655 SMPXQ9UHP9 88 aa7.78□□□□□ -1.16
RFFL-212ENST00000584655 CR1P17927 2039 aa7.77□□□□□ -1.16
RFFL-212ENST00000584655 IGKV3OR2-268A0A0C4DH90 116 aa7.77□□□□□ -1.17
RFFL-212ENST00000584655 PLP1P60201 277 aa7.77□□□□□ -1.17
RFFL-212ENST00000584655 OR1N2Q8NGR9 330 aa7.77□□□□□ -1.17
RFFL-212ENST00000584655 NMUP48645 174 aa7.77□□□□□ -1.17
RFFL-212ENST00000584655 COX19Q49B96 90 aa7.77□□□□□ -1.17
RFFL-212ENST00000584655 RNASE13Q5GAN3 156 aaKnown RBP7.77□□□□□ -1.17
RFFL-212ENST00000584655 SAPCD1Q5SSQ6 148 aa7.77□□□□□ -1.17
RFFL-212ENST00000584655 ALKBH7Q9BT30 221 aaPredicted RBP7.77□□□□□ -1.17
RFFL-212ENST00000584655 GNB1LQ9BYB4 327 aa7.77□□□□□ -1.17
RFFL-212ENST00000584655 MDFICQ9P1T7 246 aa7.77□□□□□ -1.17
RFFL-212ENST00000584655 ZFP30Q9Y2G7 519 aa7.77□□□□□ -1.17
RFFL-212ENST00000584655 KIR2DL5BA0A0G2JN68 375 aa7.77□□□□□ -1.17
RFFL-212ENST00000584655 KIR2DL5BA0A0G2JPC4 375 aa7.77□□□□□ -1.17
RFFL-212ENST00000584655 ZNF56Q15929 161 aa7.77□□□□□ -1.17
RFFL-212ENST00000584655 SMIM15Q7Z3B0 74 aa7.77□□□□□ -1.17
RFFL-212ENST00000584655 KIR2DL5AQ8N109 375 aa7.77□□□□□ -1.17
RFFL-212ENST00000584655 RPL39LQ96EH5 51 aaKnown RBP7.77□□□□□ -1.17
RFFL-212ENST00000584655 FAM223BA6NKX1 122 aa7.76□□□□□ -1.17
RFFL-212ENST00000584655 IGLL1P15814 213 aa7.76□□□□□ -1.17
RFFL-212ENST00000584655 TSPOP30536 169 aa7.76□□□□□ -1.17
RFFL-212ENST00000584655 BMI1P35226 326 aa7.76□□□□□ -1.17
RFFL-212ENST00000584655 CD300EQ496F6 205 aaPredicted RBP7.76□□□□□ -1.17
RFFL-212ENST00000584655 FAM223AQ8IWN6 122 aa7.76□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 116.3 ms