RNA–Protein interactions for RNA: ENST00000584063.5

CDK5RAP3-231, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 1 (best)

Gene CDK5RAP3, Length 2,759 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-231ENST00000584063 NOTCH2Q04721 2471 aa9.06□□□□□ -0.96
CDK5RAP3-231ENST00000584063 TCRAP04437 139 aa9.06□□□□□ -0.96
CDK5RAP3-231ENST00000584063 ARMS2P0C7Q2 107 aa9.06□□□□□ -0.96
CDK5RAP3-231ENST00000584063 RPS28P62857 69 aaKnown RBP9.06□□□□□ -0.96
CDK5RAP3-231ENST00000584063 VMA21Q3ZAQ7 101 aa9.06□□□□□ -0.96
CDK5RAP3-231ENST00000584063 FAM120AOSQ5T036 256 aa9.06□□□□□ -0.96
CDK5RAP3-231ENST00000584063 A0A0U1RQV1 116 aa9.06□□□□□ -0.96
CDK5RAP3-231ENST00000584063 RPL27AP46776 148 aaKnown RBP9.06□□□□□ -0.96
CDK5RAP3-231ENST00000584063 JPT2Q9H910 190 aa9.06□□□□□ -0.96
CDK5RAP3-231ENST00000584063 ZANQ9Y493 2812 aa9.05□□□□□ -0.96
CDK5RAP3-231ENST00000584063 A1L4Q6 167 aa9.05□□□□□ -0.96
CDK5RAP3-231ENST00000584063 HILPDAQ9Y5L2 63 aa9.05□□□□□ -0.96
CDK5RAP3-231ENST00000584063 FAM236AA0A1B0GUQ0 79 aa9.05□□□□□ -0.96
CDK5RAP3-231ENST00000584063 FAM236BA0A1B0GV22 79 aa9.05□□□□□ -0.96
CDK5RAP3-231ENST00000584063 A0A1B0GXF2 115 aa9.05□□□□□ -0.96
CDK5RAP3-231ENST00000584063 A8MWL6 223 aa9.05□□□□□ -0.96
CDK5RAP3-231ENST00000584063 SYS1-DBNDD2H3BUS1 97 aa9.05□□□□□ -0.96
CDK5RAP3-231ENST00000584063 CD5LO43866 347 aa9.05□□□□□ -0.96
CDK5RAP3-231ENST00000584063 NCR2O95944 276 aa9.05□□□□□ -0.96
CDK5RAP3-231ENST00000584063 MYCNOSP40205 109 aa9.05□□□□□ -0.96
CDK5RAP3-231ENST00000584063 OR5A1Q8NGJ0 315 aa9.05□□□□□ -0.96
CDK5RAP3-231ENST00000584063 RASL10AQ92737 203 aa9.05□□□□□ -0.96
CDK5RAP3-231ENST00000584063 AP1S3Q96PC3 154 aa9.05□□□□□ -0.96
CDK5RAP3-231ENST00000584063 TMEM133Q9H2Q1 129 aa9.05□□□□□ -0.96
CDK5RAP3-231ENST00000584063 DOPEY2Q9Y3R5 2298 aa9.04□□□□□ -0.96
CDK5RAP3-231ENST00000584063 IGF1P05019 195 aa9.04□□□□□ -0.96
CDK5RAP3-231ENST00000584063 GP9P14770 177 aa9.04□□□□□ -0.96
CDK5RAP3-231ENST00000584063 LOXL1Q08397 574 aaPredicted RBP9.04□□□□□ -0.96
CDK5RAP3-231ENST00000584063 KLRD1Q13241 179 aa9.04□□□□□ -0.96
CDK5RAP3-231ENST00000584063 HOXB4P17483 251 aaPredicted RBP9.04□□□□□ -0.96
CDK5RAP3-231ENST00000584063 Q5XG85 94 aa9.04□□□□□ -0.96
CDK5RAP3-231ENST00000584063 TMEM219Q86XT9 240 aa9.04□□□□□ -0.96
CDK5RAP3-231ENST00000584063 OR8A1Q8NGG7 326 aa9.04□□□□□ -0.96
CDK5RAP3-231ENST00000584063 VSTM2AQ8TAG5 236 aa9.04□□□□□ -0.96
CDK5RAP3-231ENST00000584063 C8orf49Q96NF6 230 aa9.04□□□□□ -0.96
CDK5RAP3-231ENST00000584063 ANKRD17O75179 2603 aaKnown RBP9.03□□□□□ -0.96
CDK5RAP3-231ENST00000584063 HELZ2Q9BYK8 2649 aaKnown RBP9.03□□□□□ -0.96
CDK5RAP3-231ENST00000584063 CD164Q04900 197 aa9.03□□□□□ -0.96
CDK5RAP3-231ENST00000584063 MLST8Q9BVC4 326 aa9.03□□□□□ -0.96
CDK5RAP3-231ENST00000584063 SMKR1H3BMG3 65 aa9.03□□□□□ -0.96
CDK5RAP3-231ENST00000584063 APOHP02749 345 aaPredicted RBP9.03□□□□□ -0.96
CDK5RAP3-231ENST00000584063 LINC01587Q99440 93 aa9.03□□□□□ -0.96
CDK5RAP3-231ENST00000584063 C20orf78Q9BR46 151 aa9.03□□□□□ -0.96
CDK5RAP3-231ENST00000584063 IGHV1-3A0A0C4DH29 117 aa9.02□□□□□ -0.96
CDK5RAP3-231ENST00000584063 KLF5Q13887 457 aaPredicted RBP9.02□□□□□ -0.96
CDK5RAP3-231ENST00000584063 THAP8Q8NA92 274 aa9.02□□□□□ -0.96
CDK5RAP3-231ENST00000584063 Q9UF83 564 aa9.02□□□□□ -0.96
CDK5RAP3-231ENST00000584063 LTAP01374 205 aa9.02□□□□□ -0.97
CDK5RAP3-231ENST00000584063 TTC32Q5I0X7 151 aa9.02□□□□□ -0.97
CDK5RAP3-231ENST00000584063 Q86TA4 180 aa9.02□□□□□ -0.97
CDK5RAP3-231ENST00000584063 SPANXB1Q9NS25 103 aaPredicted RBP9.02□□□□□ -0.97
CDK5RAP3-231ENST00000584063 C19orf71A6NCJ1 209 aa9.01□□□□□ -0.97
CDK5RAP3-231ENST00000584063 BVES-AS1Q5T3Y7 98 aa9.01□□□□□ -0.97
CDK5RAP3-231ENST00000584063 IFITM1P13164 125 aa9.01□□□□□ -0.97
CDK5RAP3-231ENST00000584063 RPL13AP40429 203 aaKnown RBP9.01□□□□□ -0.97
CDK5RAP3-231ENST00000584063 PRSS22Q9GZN4 317 aa9.01□□□□□ -0.97
CDK5RAP3-231ENST00000584063 KAAG1Q9UBP8 84 aa9.01□□□□□ -0.97
CDK5RAP3-231ENST00000584063 IGLV1-47P01700 117 aa9.01□□□□□ -0.97
CDK5RAP3-231ENST00000584063 IL4P05112 153 aa9.01□□□□□ -0.97
CDK5RAP3-231ENST00000584063 GPR183P32249 361 aa9.01□□□□□ -0.97
CDK5RAP3-231ENST00000584063 IFI27P40305 119 aaPredicted RBP9.01□□□□□ -0.97
CDK5RAP3-231ENST00000584063 LINC00311Q8N616 119 aa9.01□□□□□ -0.97
CDK5RAP3-231ENST00000584063 PRSS3P2Q8NHM4 247 aa9.01□□□□□ -0.97
CDK5RAP3-231ENST00000584063 FASNP49327 2511 aaKnown RBP9□□□□□ -0.97
CDK5RAP3-231ENST00000584063 BUB1B-PAK6H3BSN5 160 aa9□□□□□ -0.97
CDK5RAP3-231ENST00000584063 IGLV2-11P01706 119 aa9□□□□□ -0.97
CDK5RAP3-231ENST00000584063 HES1Q14469 280 aa9□□□□□ -0.97
CDK5RAP3-231ENST00000584063 SLC25A34Q6PIV7 304 aa9□□□□□ -0.97
CDK5RAP3-231ENST00000584063 Q8TAT8 98 aa9□□□□□ -0.97
CDK5RAP3-231ENST00000584063 FMC1Q96HJ9 113 aa9□□□□□ -0.97
CDK5RAP3-231ENST00000584063 TIMM23O14925 209 aa9□□□□□ -0.97
CDK5RAP3-231ENST00000584063 IGKV1-17P01599 117 aa9□□□□□ -0.97
CDK5RAP3-231ENST00000584063 CRIP1P50238 77 aa9□□□□□ -0.97
CDK5RAP3-231ENST00000584063 C11orf71Q6IPW1 123 aa9□□□□□ -0.97
CDK5RAP3-231ENST00000584063 TMEM75Q8N9X5 138 aa9□□□□□ -0.97
CDK5RAP3-231ENST00000584063 KLF12Q9Y4X4 402 aa9□□□□□ -0.97
CDK5RAP3-231ENST00000584063 CREBBPQ92793 2442 aa8.99□□□□□ -0.97
CDK5RAP3-231ENST00000584063 CUBNO60494 3623 aa8.99□□□□□ -0.97
CDK5RAP3-231ENST00000584063 IGHV3OR16-13A0A075B7E8 117 aa8.99□□□□□ -0.97
CDK5RAP3-231ENST00000584063 IGHV3-74A0A0B4J1X5 117 aa8.99□□□□□ -0.97
CDK5RAP3-231ENST00000584063 USP17L23D6RBM5 183 aa8.99□□□□□ -0.97
CDK5RAP3-231ENST00000584063 NDUFA7O95182 113 aa8.99□□□□□ -0.97
CDK5RAP3-231ENST00000584063 GCSHP23434 173 aa8.99□□□□□ -0.97
CDK5RAP3-231ENST00000584063 HLA-DMBP28068 263 aa8.99□□□□□ -0.97
CDK5RAP3-231ENST00000584063 TMEM30BQ3MIR4 351 aa8.99□□□□□ -0.97
CDK5RAP3-231ENST00000584063 LYRM7Q5U5X0 104 aa8.99□□□□□ -0.97
CDK5RAP3-231ENST00000584063 TRPT1Q86TN4 253 aaKnown RBP8.99□□□□□ -0.97
CDK5RAP3-231ENST00000584063 TRGV9Q99603 122 aa8.99□□□□□ -0.97
CDK5RAP3-231ENST00000584063 IGKV2-40A0A087WW87 121 aaPredicted RBP8.99□□□□□ -0.97
CDK5RAP3-231ENST00000584063 IGKV2D-40P01614 121 aaPredicted RBP8.99□□□□□ -0.97
CDK5RAP3-231ENST00000584063 AMN1Q8IY45 258 aa8.99□□□□□ -0.97
CDK5RAP3-231ENST00000584063 BPESC1Q9GZL8 116 aa8.99□□□□□ -0.97
CDK5RAP3-231ENST00000584063 LINC00482Q8N8I6 264 aa8.98□□□□□ -0.97
CDK5RAP3-231ENST00000584063 C18orf15Q96N68 181 aa8.98□□□□□ -0.97
CDK5RAP3-231ENST00000584063 TMEM191AQ9H0A3 160 aa8.98□□□□□ -0.97
CDK5RAP3-231ENST00000584063 F11RQ9Y624 299 aaKnown RBP8.98□□□□□ -0.97
CDK5RAP3-231ENST00000584063 SPCS1Q9Y6A9 102 aa8.98□□□□□ -0.97
CDK5RAP3-231ENST00000584063 FBN2P35556 2912 aa8.98□□□□□ -0.97
CDK5RAP3-231ENST00000584063 A0A1B0GUT8 65 aa8.98□□□□□ -0.97
CDK5RAP3-231ENST00000584063 D6R8Y8 96 aa8.98□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 42.8 ms