RNA–Protein interactions for RNA: ENST00000583320.5

SNX11-212, Transcript of sorting nexin 11, humanhuman

TSL 3

Gene SNX11, Length 965 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX11-212ENST00000583320 LEPP41159 167 aa13.07□□□□□ -0.32
SNX11-212ENST00000583320 TMEM88Q6PEY1 159 aa13.07□□□□□ -0.32
SNX11-212ENST00000583320 CBLN2Q8IUK8 224 aa13.07□□□□□ -0.32
SNX11-212ENST00000583320 ZFAND2AQ8N6M9 145 aa13.07□□□□□ -0.32
SNX11-212ENST00000583320 VPS13DQ5THJ4 4388 aa13.06□□□□□ -0.32
SNX11-212ENST00000583320 H3BMM0 161 aa13.06□□□□□ -0.32
SNX11-212ENST00000583320 SH2D1AO60880 128 aa13.06□□□□□ -0.32
SNX11-212ENST00000583320 RPP21Q9H633 154 aaKnown RBP13.06□□□□□ -0.32
SNX11-212ENST00000583320 IL36BQ9NZH7 164 aa13.06□□□□□ -0.32
SNX11-212ENST00000583320 KLLNB2CW77 178 aa13.05□□□□□ -0.32
SNX11-212ENST00000583320 PFN1P07737 140 aaKnown RBP13.05□□□□□ -0.32
SNX11-212ENST00000583320 S100PP25815 95 aa13.05□□□□□ -0.32
SNX11-212ENST00000583320 ZNF80P51504 273 aaPredicted RBP13.05□□□□□ -0.32
SNX11-212ENST00000583320 KCNIP4Q6PIL6 250 aa13.05□□□□□ -0.32
SNX11-212ENST00000583320 DEFB125Q8N687 156 aa13.05□□□□□ -0.32
SNX11-212ENST00000583320 TRAV9-1A0A075B6T8 112 aa13.04□□□□□ -0.32
SNX11-212ENST00000583320 FAM231BA6NCW3 169 aa13.04□□□□□ -0.32
SNX11-212ENST00000583320 KNCNA6PVL3 124 aa13.04□□□□□ -0.32
SNX11-212ENST00000583320 A8MWL6 223 aa13.04□□□□□ -0.32
SNX11-212ENST00000583320 RPS20P60866 119 aaKnown RBP13.04□□□□□ -0.32
SNX11-212ENST00000583320 ACTL10Q5JWF8 245 aa13.04□□□□□ -0.32
SNX11-212ENST00000583320 Q6AWC8 147 aa13.04□□□□□ -0.32
SNX11-212ENST00000583320 AMTNQ6UX39 209 aa13.04□□□□□ -0.32
SNX11-212ENST00000583320 BTF3L4Q96K17 158 aa13.04□□□□□ -0.32
SNX11-212ENST00000583320 YPEL4Q96NS1 127 aa13.04□□□□□ -0.32
SNX11-212ENST00000583320 AGRNO00468 2067 aa13.04□□□□□ -0.32
SNX11-212ENST00000583320 TRAV21A0A0B4J279 112 aa13.03□□□□□ -0.32
SNX11-212ENST00000583320 SMIM27A0A1W2PRY6 76 aa13.03□□□□□ -0.32
SNX11-212ENST00000583320 GPX1P07203 203 aa13.03□□□□□ -0.32
SNX11-212ENST00000583320 CD7P09564 240 aa13.03□□□□□ -0.32
SNX11-212ENST00000583320 TSKUQ8WUA8 353 aa13.03□□□□□ -0.32
SNX11-212ENST00000583320 GFRA4Q9GZZ7 299 aa13.03□□□□□ -0.32
SNX11-212ENST00000583320 XKRY2A2RUG3 117 aa13.02□□□□□ -0.33
SNX11-212ENST00000583320 CDKN1BP46527 198 aa13.02□□□□□ -0.33
SNX11-212ENST00000583320 ELOBQ15370 118 aa13.02□□□□□ -0.33
SNX11-212ENST00000583320 LINC01559Q495D7 138 aa13.02□□□□□ -0.33
SNX11-212ENST00000583320 OR2D3Q8NGH3 330 aa13.02□□□□□ -0.33
SNX11-212ENST00000583320 PYGO2Q9BRQ0 406 aa13.02□□□□□ -0.33
SNX11-212ENST00000583320 PKHD1P08F94 4074 aa13.01□□□□□ -0.33
SNX11-212ENST00000583320 TRBV24-1A0A075B6N3 115 aa13.01□□□□□ -0.33
SNX11-212ENST00000583320 TMEM189A5PLL7 270 aa13.01□□□□□ -0.33
SNX11-212ENST00000583320 AMBPP02760 352 aa13.01□□□□□ -0.33
SNX11-212ENST00000583320 PRR9Q5T870 116 aa13.01□□□□□ -0.33
SNX11-212ENST00000583320 SRD5A3Q9H8P0 318 aa13.01□□□□□ -0.33
SNX11-212ENST00000583320 C7orf71A4D174 169 aa13□□□□□ -0.33
SNX11-212ENST00000583320 COLCA2A8K830 154 aa13□□□□□ -0.33
SNX11-212ENST00000583320 CXCL1P09341 107 aa13□□□□□ -0.33
SNX11-212ENST00000583320 FOXA3P55318 350 aaPredicted RBP13□□□□□ -0.33
SNX11-212ENST00000583320 ZNF124Q15973 351 aa13□□□□□ -0.33
SNX11-212ENST00000583320 TRPT1Q86TN4 253 aaKnown RBP13□□□□□ -0.33
SNX11-212ENST00000583320 STHQ8IWL8 128 aa13□□□□□ -0.33
SNX11-212ENST00000583320 DNAH6Q9C0G6 4158 aa13□□□□□ -0.33
SNX11-212ENST00000583320 NUPR2A6NF83 97 aa12.99□□□□□ -0.33
SNX11-212ENST00000583320 IGKV3-20P01619 116 aa12.99□□□□□ -0.33
SNX11-212ENST00000583320 RNASE4P34096 147 aaKnown RBP12.99□□□□□ -0.33
SNX11-212ENST00000583320 RPL19P84098 196 aaKnown RBP12.99□□□□□ -0.33
SNX11-212ENST00000583320 OVOL2Q9BRP0 275 aa12.99□□□□□ -0.33
SNX11-212ENST00000583320 NAT8BQ9UHF3 227 aa12.99□□□□□ -0.33
SNX11-212ENST00000583320 URGCP-MRPS24S4R325 110 aa12.99□□□□□ -0.33
SNX11-212ENST00000583320 CA1P00915 261 aaPredicted RBP12.98□□□□□ -0.33
SNX11-212ENST00000583320 ORM1P02763 201 aa12.98□□□□□ -0.33
SNX11-212ENST00000583320 CEMP1Q6PRD7 247 aaPredicted RBP12.98□□□□□ -0.33
SNX11-212ENST00000583320 C20orf144Q9BQM9 153 aa12.98□□□□□ -0.33
SNX11-212ENST00000583320 FAM3BP58499 235 aaPredicted RBP12.97□□□□□ -0.33
SNX11-212ENST00000583320 NUTF2P61970 127 aaKnown RBP12.97□□□□□ -0.33
SNX11-212ENST00000583320 SPINK13Q1W4C9 94 aa12.97□□□□□ -0.33
SNX11-212ENST00000583320 GFI1BQ5VTD9 330 aa12.97□□□□□ -0.33
SNX11-212ENST00000583320 NEU1Q99519 415 aa12.97□□□□□ -0.33
SNX11-212ENST00000583320 FAT2Q9NYQ8 4349 aa12.97□□□□□ -0.33
SNX11-212ENST00000583320 IGKV3D-20A0A0C4DH25 116 aa12.96□□□□□ -0.33
SNX11-212ENST00000583320 A0A0J9YWU9 116 aa12.96□□□□□ -0.33
SNX11-212ENST00000583320 A0A1W2PPQ1 181 aa12.96□□□□□ -0.33
SNX11-212ENST00000583320 J3KRW8 73 aa12.96□□□□□ -0.33
SNX11-212ENST00000583320 ZNF324O75467 553 aaPredicted RBP12.96□□□□□ -0.33
SNX11-212ENST00000583320 TYMSP04818 313 aa12.96□□□□□ -0.33
SNX11-212ENST00000583320 KIR3DS1Q14943 382 aa12.96□□□□□ -0.33
SNX11-212ENST00000583320 MORN3Q6PF18 240 aaPredicted RBP12.96□□□□□ -0.33
SNX11-212ENST00000583320 C11orf21Q9P2W6 132 aa12.96□□□□□ -0.33
SNX11-212ENST00000583320 TGIF2-C20orf24A0A0A6YYL0 155 aa12.95□□□□□ -0.34
SNX11-212ENST00000583320 HIGD1CA8MV81 97 aa12.95□□□□□ -0.34
SNX11-212ENST00000583320 M0R2Z0 102 aa12.95□□□□□ -0.34
SNX11-212ENST00000583320 DNLZQ5SXM8 178 aa12.95□□□□□ -0.34
SNX11-212ENST00000583320 NUP35Q8NFH5 326 aa12.95□□□□□ -0.34
SNX11-212ENST00000583320 GTSF1Q8WW33 167 aa12.95□□□□□ -0.34
SNX11-212ENST00000583320 KCNS1Q96KK3 526 aa12.95□□□□□ -0.34
SNX11-212ENST00000583320 FAM210BQ96KR6 192 aa12.95□□□□□ -0.34
SNX11-212ENST00000583320 CRXO43186 299 aaPredicted RBP12.94□□□□□ -0.34
SNX11-212ENST00000583320 TDRG1Q3Y452 100 aa12.94□□□□□ -0.34
SNX11-212ENST00000583320 COX19Q49B96 90 aa12.94□□□□□ -0.34
SNX11-212ENST00000583320 DNAH2Q9P225 4427 aa12.94□□□□□ -0.34
SNX11-212ENST00000583320 TRAV12-3A0A0B4J271 114 aa12.93□□□□□ -0.34
SNX11-212ENST00000583320 IGLC6P0CF74 106 aa12.93□□□□□ -0.34
SNX11-212ENST00000583320 RAB5AP20339 215 aa12.93□□□□□ -0.34
SNX11-212ENST00000583320 TCL1AP56279 114 aa12.93□□□□□ -0.34
SNX11-212ENST00000583320 RASL11AQ6T310 242 aa12.93□□□□□ -0.34
SNX11-212ENST00000583320 ATP5L2Q7Z4Y8 100 aa12.93□□□□□ -0.34
SNX11-212ENST00000583320 ZNF575Q86XF7 245 aa12.93□□□□□ -0.34
SNX11-212ENST00000583320 DNAH17Q9UFH2 4485 aa12.92□□□□□ -0.34
SNX11-212ENST00000583320 TRAV12-2A0A075B6T6 113 aa12.92□□□□□ -0.34
SNX11-212ENST00000583320 TMSB15BA0A087X1C1 80 aa12.92□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 39.1 ms