RNA–Protein interactions for RNA: ENST00000583080.1

SREBF1-221, Transcript of sterol regulatory element binding transcription factor 1, humanhuman

TSL 5

Gene SREBF1, Length 482 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF1-221ENST00000583080 SH2D6Q7Z4S9 175 aa10.72□□□□□ -0.69
SREBF1-221ENST00000583080 Q8N3U1 123 aa10.72□□□□□ -0.69
SREBF1-221ENST00000583080 DIRC3C9JPN6 131 aa10.71□□□□□ -0.69
SREBF1-221ENST00000583080 OR7C2O60412 319 aa10.71□□□□□ -0.69
SREBF1-221ENST00000583080 NHLH2Q02577 135 aa10.71□□□□□ -0.69
SREBF1-221ENST00000583080 OR5C1Q8NGR4 320 aa10.71□□□□□ -0.69
SREBF1-221ENST00000583080 NUDT15Q9NV35 164 aa10.71□□□□□ -0.69
SREBF1-221ENST00000583080 TRAV8-6A0A0B4J262 113 aa10.7□□□□□ -0.7
SREBF1-221ENST00000583080 LYRM1O43325 122 aa10.7□□□□□ -0.7
SREBF1-221ENST00000583080 TCRBP04435 133 aa10.7□□□□□ -0.7
SREBF1-221ENST00000583080 TYMSP04818 313 aa10.7□□□□□ -0.7
SREBF1-221ENST00000583080 UBE2L3P68036 154 aaKnown RBP10.7□□□□□ -0.7
SREBF1-221ENST00000583080 SLC25A29Q8N8R3 303 aa10.7□□□□□ -0.7
SREBF1-221ENST00000583080 DEFB104AQ8WTQ1 72 aa10.7□□□□□ -0.7
SREBF1-221ENST00000583080 F6UZH7 168 aa10.69□□□□□ -0.7
SREBF1-221ENST00000583080 LECT2O14960 151 aa10.69□□□□□ -0.7
SREBF1-221ENST00000583080 LENEPQ9Y5L5 61 aa10.69□□□□□ -0.7
SREBF1-221ENST00000583080 UBR4Q5T4S7 5183 aa10.69□□□□□ -0.7
SREBF1-221ENST00000583080 FBLL1A6NHQ2 334 aaKnown RBP10.68□□□□□ -0.7
SREBF1-221ENST00000583080 EIF3GO75821 320 aaKnown RBP eCLIP10.68□□□□□ -0.7
SREBF1-221ENST00000583080 LINC01620Q4KN68 170 aa10.68□□□□□ -0.7
SREBF1-221ENST00000583080 HYLS1Q96M11 299 aa10.68□□□□□ -0.7
SREBF1-221ENST00000583080 WDR61Q9GZS3 305 aaKnown RBP10.68□□□□□ -0.7
SREBF1-221ENST00000583080 RPH3ALQ9UNE2 315 aa10.68□□□□□ -0.7
SREBF1-221ENST00000583080 FAT3Q8TDW7 4589 aa10.68□□□□□ -0.7
SREBF1-221ENST00000583080 IGLV2-33A0A075B6J2 118 aaPredicted RBP10.67□□□□□ -0.7
SREBF1-221ENST00000583080 PFN1P07737 140 aaKnown RBP10.67□□□□□ -0.7
SREBF1-221ENST00000583080 KRTAP10-4P60372 401 aaPredicted RBP10.67□□□□□ -0.7
SREBF1-221ENST00000583080 LAGE3Q14657 143 aa10.67□□□□□ -0.7
SREBF1-221ENST00000583080 LELP1Q5T871 98 aa10.67□□□□□ -0.7
SREBF1-221ENST00000583080 DPPA3Q6W0C5 159 aa10.67□□□□□ -0.7
SREBF1-221ENST00000583080 SCXQ7RTU7 201 aa10.67□□□□□ -0.7
SREBF1-221ENST00000583080 TMED6Q8WW62 240 aa10.67□□□□□ -0.7
SREBF1-221ENST00000583080 TVP23CQ96ET8 276 aa10.67□□□□□ -0.7
SREBF1-221ENST00000583080 IGHV3-73A0A0B4J1V6 119 aa10.66□□□□□ -0.7
SREBF1-221ENST00000583080 CFAP126Q5VTH2 177 aa10.66□□□□□ -0.7
SREBF1-221ENST00000583080 KCNIP2Q9NS61 270 aa10.66□□□□□ -0.7
SREBF1-221ENST00000583080 OR5AC2Q9NZP5 309 aa10.66□□□□□ -0.7
SREBF1-221ENST00000583080 TRAV8-1A0A0A6YYK1 113 aa10.65□□□□□ -0.7
SREBF1-221ENST00000583080 TRAV21A0A0B4J279 112 aa10.65□□□□□ -0.7
SREBF1-221ENST00000583080 RHOHQ15669 191 aa10.65□□□□□ -0.7
SREBF1-221ENST00000583080 PRADC1Q9BSG0 188 aa10.65□□□□□ -0.7
SREBF1-221ENST00000583080 TM2D2Q9BX73 214 aa10.65□□□□□ -0.7
SREBF1-221ENST00000583080 SDF2L1Q9HCN8 221 aa10.65□□□□□ -0.7
SREBF1-221ENST00000583080 TRBV6-4A0A1B0GX49 114 aa10.64□□□□□ -0.71
SREBF1-221ENST00000583080 RS1O15537 224 aa10.64□□□□□ -0.71
SREBF1-221ENST00000583080 H2AFB2P0C5Z0 115 aa10.64□□□□□ -0.71
SREBF1-221ENST00000583080 ZNF876PQ49A33 203 aa10.64□□□□□ -0.71
SREBF1-221ENST00000583080 SERTAD4-AS1Q5TG53 156 aa10.64□□□□□ -0.71
SREBF1-221ENST00000583080 GOLT1AQ6ZVE7 132 aa10.64□□□□□ -0.71
SREBF1-221ENST00000583080 GTSF1LQ9H1H1 148 aa10.64□□□□□ -0.71
SREBF1-221ENST00000583080 OTORQ9NRC9 128 aa10.64□□□□□ -0.71
SREBF1-221ENST00000583080 H0YIZ8 118 aa10.63□□□□□ -0.71
SREBF1-221ENST00000583080 SIX6O95475 246 aa10.63□□□□□ -0.71
SREBF1-221ENST00000583080 LRRC37A5PQ49AS3 106 aa10.63□□□□□ -0.71
SREBF1-221ENST00000583080 KHDC3LQ587J8 217 aa10.63□□□□□ -0.71
SREBF1-221ENST00000583080 FFAR4Q5NUL3 377 aa10.63□□□□□ -0.71
SREBF1-221ENST00000583080 SYT8Q8NBV8 401 aa10.63□□□□□ -0.71
SREBF1-221ENST00000583080 ATP6V0E2Q8NHE4 81 aa10.63□□□□□ -0.71
SREBF1-221ENST00000583080 ASB13Q8WXK3 278 aa10.63□□□□□ -0.71
SREBF1-221ENST00000583080 TREM1Q9NP99 234 aa10.63□□□□□ -0.71
SREBF1-221ENST00000583080 C11orf21Q9P2W6 132 aa10.63□□□□□ -0.71
SREBF1-221ENST00000583080 BOLA1Q9Y3E2 137 aa10.63□□□□□ -0.71
SREBF1-221ENST00000583080 PGPA6NDG6 321 aa10.62□□□□□ -0.71
SREBF1-221ENST00000583080 C17orf112F2Z3M2 114 aa10.62□□□□□ -0.71
SREBF1-221ENST00000583080 GNG5P63218 68 aa10.62□□□□□ -0.71
SREBF1-221ENST00000583080 DAZ4Q86SG3 579 aaKnown RBP10.62□□□□□ -0.71
SREBF1-221ENST00000583080 CMTM2Q8TAZ6 248 aa10.62□□□□□ -0.71
SREBF1-221ENST00000583080 S100ZQ8WXG8 99 aa10.62□□□□□ -0.71
SREBF1-221ENST00000583080 BAALCQ8WXS3 180 aa10.62□□□□□ -0.71
SREBF1-221ENST00000583080 KCNS1Q96KK3 526 aa10.62□□□□□ -0.71
SREBF1-221ENST00000583080 ATP5SQ99766 215 aa10.62□□□□□ -0.71
SREBF1-221ENST00000583080 DAZ3Q9NR90 486 aaKnown RBP10.62□□□□□ -0.71
SREBF1-221ENST00000583080 ZNF506Q5JVG8 444 aa10.61□□□□□ -0.71
SREBF1-221ENST00000583080 TMEM75Q8N9X5 138 aa10.61□□□□□ -0.71
SREBF1-221ENST00000583080 SGK494Q96LW2 274 aa10.61□□□□□ -0.71
SREBF1-221ENST00000583080 NMES1Q9C002 83 aa10.61□□□□□ -0.71
SREBF1-221ENST00000583080 LINC00694P0DN24 101 aa10.6□□□□□ -0.71
SREBF1-221ENST00000583080 ZNF80P51504 273 aaPredicted RBP10.6□□□□□ -0.71
SREBF1-221ENST00000583080 DNAJC30Q96LL9 226 aa10.6□□□□□ -0.71
SREBF1-221ENST00000583080 C9orf85Q96MD7 179 aa10.6□□□□□ -0.71
SREBF1-221ENST00000583080 MBD2Q9UBB5 411 aa10.6□□□□□ -0.71
SREBF1-221ENST00000583080 PLA2G2DQ9UNK4 145 aa10.6□□□□□ -0.71
SREBF1-221ENST00000583080 PKHD1L1Q86WI1 4243 aa10.59□□□□□ -0.71
SREBF1-221ENST00000583080 TRAV8-3A0A0A6YYJ7 113 aa10.59□□□□□ -0.71
SREBF1-221ENST00000583080 PGPEP1LA6NFU8 196 aa10.59□□□□□ -0.71
SREBF1-221ENST00000583080 PFDN1O60925 122 aa10.59□□□□□ -0.71
SREBF1-221ENST00000583080 MGST1P10620 155 aaKnown RBP10.59□□□□□ -0.71
SREBF1-221ENST00000583080 TAS2R45P59539 299 aa10.59□□□□□ -0.71
SREBF1-221ENST00000583080 Q6ZNX1 250 aa10.59□□□□□ -0.71
SREBF1-221ENST00000583080 CHAC1Q9BUX1 264 aa10.59□□□□□ -0.71
SREBF1-221ENST00000583080 GAGE12JA6NER3 117 aa10.58□□□□□ -0.72
SREBF1-221ENST00000583080 CIDEAO60543 219 aa10.58□□□□□ -0.72
SREBF1-221ENST00000583080 OXTP01178 125 aa10.58□□□□□ -0.72
SREBF1-221ENST00000583080 GAGE1Q13065 139 aa10.58□□□□□ -0.72
SREBF1-221ENST00000583080 GAGE4Q13068 117 aa10.58□□□□□ -0.72
SREBF1-221ENST00000583080 GAGE5Q13069 117 aa10.58□□□□□ -0.72
SREBF1-221ENST00000583080 GAGE13Q4V321 117 aa10.58□□□□□ -0.72
SREBF1-221ENST00000583080 CIRBP-AS1Q8TBR5 109 aa10.58□□□□□ -0.72
SREBF1-221ENST00000583080 Q9UF83 564 aa10.58□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 78.8 ms