RNA–Protein interactions for RNA: ENST00000582594.5

PPP4R1-222, Transcript of protein phosphatase 4 regulatory subunit 1, human

TSL 1 (best)

Gene PPP4R1, Length 2,982 nt, Biotype retained intron, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PPP4R1-222	ENST00000582594	VKORC1	Q9BQB6	163 aa		7.33	□□□□□ -1.24
PPP4R1-222	ENST00000582594	HIF1AN	Q9NWT6	349 aa		7.33	□□□□□ -1.24
PPP4R1-222	ENST00000582594	LINC01549	A6NIU2	74 aa		7.33	□□□□□ -1.24
PPP4R1-222	ENST00000582594	CLEC19A	Q6UXS0	136 aa		7.33	□□□□□ -1.24
PPP4R1-222	ENST00000582594	OR11H6	Q8NGC7	330 aa		7.33	□□□□□ -1.24
PPP4R1-222	ENST00000582594	GLMP	Q8WWB7	406 aa		7.33	□□□□□ -1.24
PPP4R1-222	ENST00000582594	PTH2	Q96A98	100 aa		7.33	□□□□□ -1.24
PPP4R1-222	ENST00000582594	RAX	Q9Y2V3	346 aa		7.33	□□□□□ -1.24
PPP4R1-222	ENST00000582594	MSRB2	Q9Y3D2	182 aa		7.33	□□□□□ -1.24
PPP4R1-222	ENST00000582594	RELN	P78509	3460 aa		7.33	□□□□□ -1.24
PPP4R1-222	ENST00000582594	IGHV7-81	A0A0B4J1V7	117 aa		7.32	□□□□□ -1.24
PPP4R1-222	ENST00000582594	PRSS47	A8MTI9	375 aa		7.32	□□□□□ -1.24
PPP4R1-222	ENST00000582594	SCGB2A1	O75556	95 aa		7.32	□□□□□ -1.24
PPP4R1-222	ENST00000582594	TGFA	P01135	160 aa		7.32	□□□□□ -1.24
PPP4R1-222	ENST00000582594	EMP1	P54849	157 aa		7.32	□□□□□ -1.24
PPP4R1-222	ENST00000582594	PRR9	Q5T870	116 aa		7.32	□□□□□ -1.24
PPP4R1-222	ENST00000582594	SYT8	Q8NBV8	401 aa		7.32	□□□□□ -1.24
PPP4R1-222	ENST00000582594	LY6G5B	Q8NDX9	201 aa		7.32	□□□□□ -1.24
PPP4R1-222	ENST00000582594	SMIM2	Q9BVW6	85 aa		7.32	□□□□□ -1.24
PPP4R1-222	ENST00000582594	ZFAND3	Q9H8U3	227 aa		7.32	□□□□□ -1.24
PPP4R1-222	ENST00000582594	TRAV8-2	A0A0B4J237	113 aa		7.32	□□□□□ -1.24
PPP4R1-222	ENST00000582594	LINC01548	A6NM66	108 aa		7.32	□□□□□ -1.24
PPP4R1-222	ENST00000582594	MGP	P08493	103 aa		7.32	□□□□□ -1.24
PPP4R1-222	ENST00000582594	GRN	P28799	593 aa	Known RBP	7.32	□□□□□ -1.24
PPP4R1-222	ENST00000582594	SMCP	P49901	116 aa	Predicted RBP	7.32	□□□□□ -1.24
PPP4R1-222	ENST00000582594	DEFB1	P60022	68 aa		7.32	□□□□□ -1.24
PPP4R1-222	ENST00000582594	SCGB1D4	Q6XE38	83 aa		7.32	□□□□□ -1.24
PPP4R1-222	ENST00000582594	ZFP2	Q6ZN57	461 aa		7.32	□□□□□ -1.24
PPP4R1-222	ENST00000582594	KLHL30-AS1	Q8NEE0	82 aa		7.32	□□□□□ -1.24
PPP4R1-222	ENST00000582594	PRADC1	Q9BSG0	188 aa		7.32	□□□□□ -1.24
PPP4R1-222	ENST00000582594	ZNF815P	A8K554	130 aa		7.32	□□□□□ -1.24
PPP4R1-222	ENST00000582594	SLC25A16	P16260	332 aa		7.32	□□□□□ -1.24
PPP4R1-222	ENST00000582594	VMO1	Q7Z5L0	202 aa		7.32	□□□□□ -1.24
PPP4R1-222	ENST00000582594	FAM90A27P	A6NNH2	459 aa		7.31	□□□□□ -1.24
PPP4R1-222	ENST00000582594	SRSF9	Q13242	221 aa	Known RBP eCLIP	7.31	□□□□□ -1.24
PPP4R1-222	ENST00000582594	CLPSL1	A2RUU4	121 aa		7.31	□□□□□ -1.24
PPP4R1-222	ENST00000582594	PRSS29P	A6NIE9	313 aa		7.31	□□□□□ -1.24
PPP4R1-222	ENST00000582594	ODF3B	A8MYP8	253 aa		7.31	□□□□□ -1.24
PPP4R1-222	ENST00000582594		G3V318	75 aa		7.31	□□□□□ -1.24
PPP4R1-222	ENST00000582594	FOXI1	Q12951	378 aa		7.31	□□□□□ -1.24
PPP4R1-222	ENST00000582594	C8orf86	Q6ZUL3	223 aa		7.31	□□□□□ -1.24
PPP4R1-222	ENST00000582594	NFE4	Q86UQ8	179 aa		7.31	□□□□□ -1.24
PPP4R1-222	ENST00000582594	C14orf178	Q8N769	122 aa	Predicted RBP	7.31	□□□□□ -1.24
PPP4R1-222	ENST00000582594	TTC28	Q96AY4	2481 aa		7.31	□□□□□ -1.24
PPP4R1-222	ENST00000582594	TRAV26-1	A0A087WT03	109 aa		7.3	□□□□□ -1.24
PPP4R1-222	ENST00000582594		Q8NA96	180 aa		7.3	□□□□□ -1.24
PPP4R1-222	ENST00000582594	BAALC	Q8WXS3	180 aa		7.3	□□□□□ -1.24
PPP4R1-222	ENST00000582594	RASL10A	Q92737	203 aa		7.3	□□□□□ -1.24
PPP4R1-222	ENST00000582594	SLC50A1	Q9BRV3	221 aa		7.3	□□□□□ -1.24
PPP4R1-222	ENST00000582594	RBAKDN	A6NC62	111 aa		7.3	□□□□□ -1.24
PPP4R1-222	ENST00000582594	FHL3	Q13643	280 aa		7.3	□□□□□ -1.24
PPP4R1-222	ENST00000582594	C2orf66	Q6UXQ4	117 aa		7.3	□□□□□ -1.24
PPP4R1-222	ENST00000582594	NEXN-AS1	Q8NBZ9	246 aa		7.3	□□□□□ -1.24
PPP4R1-222	ENST00000582594	NBAS	A2RRP1	2371 aa		7.3	□□□□□ -1.24
PPP4R1-222	ENST00000582594	ANKHD1	Q8IWZ3	2542 aa	Known RBP	7.3	□□□□□ -1.24
PPP4R1-222	ENST00000582594	RIF1	Q5UIP0	2472 aa	Known RBP	7.3	□□□□□ -1.24
PPP4R1-222	ENST00000582594	SPTBN1	Q01082	2364 aa	Known RBP	7.3	□□□□□ -1.24
PPP4R1-222	ENST00000582594	TRAV12-1	A0A0B4J245	112 aa		7.29	□□□□□ -1.24
PPP4R1-222	ENST00000582594	ATP6V0E1	O15342	81 aa		7.29	□□□□□ -1.24
PPP4R1-222	ENST00000582594	TSPAN13	O95857	204 aa		7.29	□□□□□ -1.24
PPP4R1-222	ENST00000582594	MT-ATP8	P03928	68 aa		7.29	□□□□□ -1.24
PPP4R1-222	ENST00000582594	PRTN3	P24158	256 aa		7.29	□□□□□ -1.24
PPP4R1-222	ENST00000582594	SUMO2	P61956	95 aa	Known RBP	7.29	□□□□□ -1.24
PPP4R1-222	ENST00000582594	CFAP126	Q5VTH2	177 aa		7.29	□□□□□ -1.24
PPP4R1-222	ENST00000582594	DLX4	Q92988	240 aa	Predicted RBP	7.29	□□□□□ -1.24
PPP4R1-222	ENST00000582594	TOMM6	Q96B49	74 aa		7.29	□□□□□ -1.24
PPP4R1-222	ENST00000582594	C16orf92	Q96LL3	132 aa		7.29	□□□□□ -1.24
PPP4R1-222	ENST00000582594	C1QTNF4	Q9BXJ3	329 aa		7.29	□□□□□ -1.24
PPP4R1-222	ENST00000582594	CDIP1	Q9H305	208 aa		7.29	□□□□□ -1.24
PPP4R1-222	ENST00000582594	ASH1L	Q9NR48	2969 aa	Known RBP	7.29	□□□□□ -1.24
PPP4R1-222	ENST00000582594	S100A4	P26447	101 aa	Known RBP	7.29	□□□□□ -1.24
PPP4R1-222	ENST00000582594		Q8N9W7	124 aa		7.29	□□□□□ -1.24
PPP4R1-222	ENST00000582594	SVIP	Q8NHG7	77 aa		7.29	□□□□□ -1.24
PPP4R1-222	ENST00000582594	CCDC140	Q96MF4	163 aa		7.29	□□□□□ -1.24
PPP4R1-222	ENST00000582594	SPINK8	P0C7L1	97 aa		7.29	□□□□□ -1.24
PPP4R1-222	ENST00000582594	ORMDL2	Q53FV1	153 aa		7.29	□□□□□ -1.24
PPP4R1-222	ENST00000582594		Q8N6K4	173 aa		7.29	□□□□□ -1.24
PPP4R1-222	ENST00000582594	C20orf173	Q96LM9	149 aa		7.29	□□□□□ -1.24
PPP4R1-222	ENST00000582594	GEMIN7	Q9H840	131 aa	Known RBP	7.29	□□□□□ -1.24
PPP4R1-222	ENST00000582594	ZFHX3	Q15911	3703 aa		7.28	□□□□□ -1.24
PPP4R1-222	ENST00000582594	MRAP2	Q96G30	205 aa		7.28	□□□□□ -1.24
PPP4R1-222	ENST00000582594	LINC00527	Q9UJ94	153 aa		7.28	□□□□□ -1.24
PPP4R1-222	ENST00000582594	DUSP14	O95147	198 aa	Known RBP	7.28	□□□□□ -1.24
PPP4R1-222	ENST00000582594	METTL26	Q96S19	204 aa		7.28	□□□□□ -1.24
PPP4R1-222	ENST00000582594	IGKV3-7	A0A075B6H7	116 aa		7.27	□□□□□ -1.25
PPP4R1-222	ENST00000582594	FAM110D	Q8TAY7	271 aa	Predicted RBP	7.27	□□□□□ -1.25
PPP4R1-222	ENST00000582594	TIMD4	Q96H15	378 aa		7.27	□□□□□ -1.25
PPP4R1-222	ENST00000582594		M0R1W7	72 aa		7.27	□□□□□ -1.25
PPP4R1-222	ENST00000582594	CRYBA4	P53673	196 aa		7.27	□□□□□ -1.25
PPP4R1-222	ENST00000582594	XG	P55808	180 aa		7.27	□□□□□ -1.25
PPP4R1-222	ENST00000582594	C9orf47	Q6ZRZ4	202 aa		7.27	□□□□□ -1.25
PPP4R1-222	ENST00000582594	CARD19	Q96LW7	228 aa		7.27	□□□□□ -1.25
PPP4R1-222	ENST00000582594	PHLDA3	Q9Y5J5	127 aa		7.27	□□□□□ -1.25
PPP4R1-222	ENST00000582594	IGHV4-4	A0A075B6R2	117 aa		7.26	□□□□□ -1.25
PPP4R1-222	ENST00000582594	TMEM238L	A0A1B0GVL6	79 aa		7.26	□□□□□ -1.25
PPP4R1-222	ENST00000582594		A6NJY4	79 aa		7.26	□□□□□ -1.25
PPP4R1-222	ENST00000582594	GNRH2	O43555	120 aa		7.26	□□□□□ -1.25
PPP4R1-222	ENST00000582594	ZFP36	P26651	326 aa	Known RBP	7.26	□□□□□ -1.25
PPP4R1-222	ENST00000582594	ARL3	P36405	182 aa		7.26	□□□□□ -1.25
PPP4R1-222	ENST00000582594	TCTEX1D4	Q5JR98	221 aa		7.26	□□□□□ -1.25

Retrieved 100 of 20,778 RNA–protein pairs in 43.7 ms