RNA–Protein interactions for RNA: ENST00000582252.1

CCDC47-204, Transcript of coiled-coil domain containing 47, humanhuman

TSL 2 BASIC

Gene CCDC47, Length 1,719 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC47-204ENST00000582252 TEP1Q99973 2627 aaKnown RBP17.05■□□□□ 0.32
CCDC47-204ENST00000582252 MUC21A0A0G2JKD1 596 aa17.05■□□□□ 0.32
CCDC47-204ENST00000582252 MUC21A0A140T8X8 626 aa17.05■□□□□ 0.32
CCDC47-204ENST00000582252 D6R8Y8 96 aa17.05■□□□□ 0.32
CCDC47-204ENST00000582252 C3orf79P0CE67 100 aa17.05■□□□□ 0.32
CCDC47-204ENST00000582252 MRPL51Q4U2R6 128 aaKnown RBP17.05■□□□□ 0.32
CCDC47-204ENST00000582252 MUC21Q5SSG8 566 aa17.05■□□□□ 0.32
CCDC47-204ENST00000582252 WFDC3Q8IUB2 231 aa17.05■□□□□ 0.32
CCDC47-204ENST00000582252 C4orf3Q8WVX3 66 aa17.05■□□□□ 0.32
CCDC47-204ENST00000582252 C2orf70A6NJV1 201 aa17.04■□□□□ 0.32
CCDC47-204ENST00000582252 LINC01619G3V211 115 aa17.04■□□□□ 0.32
CCDC47-204ENST00000582252 PPBPP02775 128 aa17.04■□□□□ 0.32
CCDC47-204ENST00000582252 PRR9Q5T870 116 aa17.04■□□□□ 0.32
CCDC47-204ENST00000582252 Q6ZSV7 163 aa17.04■□□□□ 0.32
CCDC47-204ENST00000582252 FA2HQ7L5A8 372 aa17.04■□□□□ 0.32
CCDC47-204ENST00000582252 PRSS3P2Q8NHM4 247 aa17.04■□□□□ 0.32
CCDC47-204ENST00000582252 SNAI2O43623 268 aa17.04■□□□□ 0.32
CCDC47-204ENST00000582252 TCF21O43680 179 aa17.04■□□□□ 0.32
CCDC47-204ENST00000582252 DDTP30046 118 aa17.04■□□□□ 0.32
CCDC47-204ENST00000582252 CKS2P33552 79 aa17.04■□□□□ 0.32
CCDC47-204ENST00000582252 DPF1Q92782 380 aa17.04■□□□□ 0.32
CCDC47-204ENST00000582252 AP5S1Q9NUS5 200 aa17.03■□□□□ 0.32
CCDC47-204ENST00000582252 PEMTQ9UBM1 199 aa17.03■□□□□ 0.32
CCDC47-204ENST00000582252 C2CD3Q4AC94 2353 aa17.02■□□□□ 0.32
CCDC47-204ENST00000582252 IGHV1-24A0A0C4DH33 117 aa17.02■□□□□ 0.32
CCDC47-204ENST00000582252 F6UB75 175 aa17.02■□□□□ 0.32
CCDC47-204ENST00000582252 K7EQG2 157 aa17.02■□□□□ 0.32
CCDC47-204ENST00000582252 CSN3P07498 182 aa17.02■□□□□ 0.32
CCDC47-204ENST00000582252 BTF3P20290 206 aaKnown RBP17.02■□□□□ 0.32
CCDC47-204ENST00000582252 WFDC12Q8WWY7 111 aa17.02■□□□□ 0.32
CCDC47-204ENST00000582252 ODF3Q96PU9 254 aa17.02■□□□□ 0.32
CCDC47-204ENST00000582252 VAMP8Q9BV40 100 aa17.02■□□□□ 0.32
CCDC47-204ENST00000582252 LAMTOR2Q9Y2Q5 125 aa17.02■□□□□ 0.32
CCDC47-204ENST00000582252 RNF114Q9Y508 228 aa17.02■□□□□ 0.32
CCDC47-204ENST00000582252 NIPBLQ6KC79 2804 aaeCLIP17.02■□□□□ 0.316e-8■□□□□ 9.1
CCDC47-204ENST00000582252 IGHV4-4A0A075B6R2 117 aa17.01■□□□□ 0.31
CCDC47-204ENST00000582252 J3KRW8 73 aa17.01■□□□□ 0.31
CCDC47-204ENST00000582252 DEFA6Q01524 100 aa17.01■□□□□ 0.31
CCDC47-204ENST00000582252 KIR2DL5BA0A0G2JN68 375 aa17.01■□□□□ 0.31
CCDC47-204ENST00000582252 KIR2DL5BA0A0G2JPC4 375 aa17.01■□□□□ 0.31
CCDC47-204ENST00000582252 LEPROTL1O95214 131 aa17.01■□□□□ 0.31
CCDC47-204ENST00000582252 MED14OSP0DP75 135 aa17.01■□□□□ 0.31
CCDC47-204ENST00000582252 KHDC1LQ5JSQ8 128 aa17.01■□□□□ 0.31
CCDC47-204ENST00000582252 SPANXN1Q5VSR9 72 aa17.01■□□□□ 0.31
CCDC47-204ENST00000582252 KIR2DL5AQ8N109 375 aa17.01■□□□□ 0.31
CCDC47-204ENST00000582252 RNASE4P34096 147 aaKnown RBP17■□□□□ 0.31
CCDC47-204ENST00000582252 LEPP41159 167 aa17■□□□□ 0.31
CCDC47-204ENST00000582252 ASIPP42127 132 aa17■□□□□ 0.31
CCDC47-204ENST00000582252 TFPI2P48307 235 aa17■□□□□ 0.31
CCDC47-204ENST00000582252 DEFB1P60022 68 aa17■□□□□ 0.31
CCDC47-204ENST00000582252 PMCHL1Q16048 86 aa17■□□□□ 0.31
CCDC47-204ENST00000582252 PSMG4Q5JS54 123 aa17■□□□□ 0.31
CCDC47-204ENST00000582252 EBLN2Q6P2I7 272 aa17■□□□□ 0.31
CCDC47-204ENST00000582252 SELENOKQ9Y6D0 94 aa17■□□□□ 0.31
CCDC47-204ENST00000582252 JMJD1CQ15652 2540 aa17■□□□□ 0.31
CCDC47-204ENST00000582252 ZNF688P0C7X2 276 aa16.99■□□□□ 0.31
CCDC47-204ENST00000582252 TCTEX1D4Q5JR98 221 aa16.99■□□□□ 0.31
CCDC47-204ENST00000582252 Q8N976 141 aa16.99■□□□□ 0.31
CCDC47-204ENST00000582252 MSRB1Q9NZV6 116 aa16.99■□□□□ 0.31
CCDC47-204ENST00000582252 HSPB8Q9UJY1 196 aa16.99■□□□□ 0.31
CCDC47-204ENST00000582252 S100A4P26447 101 aaKnown RBP16.99■□□□□ 0.31
CCDC47-204ENST00000582252 SLURP1P55000 103 aa16.99■□□□□ 0.31
CCDC47-204ENST00000582252 OR11H1Q8NG94 326 aa16.99■□□□□ 0.31
CCDC47-204ENST00000582252 OR1N2Q8NGR9 330 aa16.99■□□□□ 0.31
CCDC47-204ENST00000582252 TMEM70Q9BUB7 260 aa16.99■□□□□ 0.31
CCDC47-204ENST00000582252 C16orf95Q9H693 158 aa16.99■□□□□ 0.31
CCDC47-204ENST00000582252 KLLNB2CW77 178 aa16.98■□□□□ 0.31
CCDC47-204ENST00000582252 DUSP14O95147 198 aaKnown RBP16.98■□□□□ 0.31
CCDC47-204ENST00000582252 OR10AG1Q8NH19 301 aa16.98■□□□□ 0.31
CCDC47-204ENST00000582252 RNF185Q96GF1 192 aa16.98■□□□□ 0.31
CCDC47-204ENST00000582252 H3BVH4 76 aa16.97■□□□□ 0.31
CCDC47-204ENST00000582252 NDUFA7O95182 113 aa16.97■□□□□ 0.31
CCDC47-204ENST00000582252 KLHL30-AS1Q8NEE0 82 aa16.97■□□□□ 0.31
CCDC47-204ENST00000582252 C20orf144Q9BQM9 153 aa16.96■□□□□ 0.31
CCDC47-204ENST00000582252 MAP1LC3AQ9H492 121 aa16.96■□□□□ 0.31
CCDC47-204ENST00000582252 SIGLEC8Q9NYZ4 499 aa16.96■□□□□ 0.31
CCDC47-204ENST00000582252 TRAV2A0A0B4J234 112 aa16.96■□□□□ 0.3
CCDC47-204ENST00000582252 A0A0J9YX75 114 aa16.96■□□□□ 0.3
CCDC47-204ENST00000582252 C20orf202A1L168 122 aa16.96■□□□□ 0.3
CCDC47-204ENST00000582252 DEFB136Q30KP8 78 aa16.96■□□□□ 0.3
CCDC47-204ENST00000582252 ANXA2RQ3ZCQ2 193 aa16.96■□□□□ 0.3
CCDC47-204ENST00000582252 C18orf65Q6ZTR6 163 aa16.96■□□□□ 0.3
CCDC47-204ENST00000582252 OR9G4Q8NGQ1 327 aa16.96■□□□□ 0.3
CCDC47-204ENST00000582252 TSPOP30536 169 aa16.95■□□□□ 0.3
CCDC47-204ENST00000582252 IFI27P40305 119 aaPredicted RBP16.95■□□□□ 0.3
CCDC47-204ENST00000582252 Q6ZQT7 251 aa16.95■□□□□ 0.3
CCDC47-204ENST00000582252 MAP1LC3CQ9BXW4 147 aa16.95■□□□□ 0.3
CCDC47-204ENST00000582252 LOC389332A0A1B0GUA5 103 aa16.94■□□□□ 0.3
CCDC47-204ENST00000582252 NPYP01303 97 aa16.93■□□□□ 0.3
CCDC47-204ENST00000582252 FAM159AQ6UWV7 190 aa16.93■□□□□ 0.3
CCDC47-204ENST00000582252 FOXI2Q6ZQN5 318 aa16.93■□□□□ 0.3
CCDC47-204ENST00000582252 LINC01006Q8NI28 216 aa16.93■□□□□ 0.3
CCDC47-204ENST00000582252 NDUFAF3Q9BU61 184 aa16.93■□□□□ 0.3
CCDC47-204ENST00000582252 PAM16Q9Y3D7 125 aa16.93■□□□□ 0.3
CCDC47-204ENST00000582252 PHLDA3Q9Y5J5 127 aa16.93■□□□□ 0.3
CCDC47-204ENST00000582252 SMKR1H3BMG3 65 aa16.93■□□□□ 0.3
CCDC47-204ENST00000582252 CRXO43186 299 aaPredicted RBP16.93■□□□□ 0.3
CCDC47-204ENST00000582252 NCR2O95944 276 aa16.93■□□□□ 0.3
CCDC47-204ENST00000582252 C7orf71A4D174 169 aa16.92■□□□□ 0.3
CCDC47-204ENST00000582252 SYS1-DBNDD2H3BUS1 97 aa16.91■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 6.6 ms