RNA–Protein interactions for RNA: ENST00000581631.1

SMCHD1-206, Transcript of structural maintenance of chromosomes flexible hinge domain containing 1, humanhuman

TSL 3

Gene SMCHD1, Length 729 nt, Biotype retained intron, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCHD1-206ENST00000581631 PHIPQ8WWQ0 1821 aa0.33□□□□□ -2.36
SMCHD1-206ENST00000581631 CASZ1Q86V15 1759 aa0.32□□□□□ -2.36
SMCHD1-206ENST00000581631 FGD6Q6ZV73 1430 aa0.32□□□□□ -2.36
SMCHD1-206ENST00000581631 C3orf85A0A1B0GTC6 90 aa0.32□□□□□ -2.36
SMCHD1-206ENST00000581631 B4DSR2 109 aa0.32□□□□□ -2.36
SMCHD1-206ENST00000581631 EDF1O60869 148 aaKnown RBP0.32□□□□□ -2.36
SMCHD1-206ENST00000581631 SMIM24O75264 130 aa0.32□□□□□ -2.36
SMCHD1-206ENST00000581631 KLF7O75840 302 aaPredicted RBP0.32□□□□□ -2.36
SMCHD1-206ENST00000581631 OR2H2O95918 312 aa0.32□□□□□ -2.36
SMCHD1-206ENST00000581631 NCR2O95944 276 aa0.32□□□□□ -2.36
SMCHD1-206ENST00000581631 HBDP02042 147 aa0.32□□□□□ -2.36
SMCHD1-206ENST00000581631 KDELR1P24390 212 aa0.32□□□□□ -2.36
SMCHD1-206ENST00000581631 SDC4P31431 198 aa0.32□□□□□ -2.36
SMCHD1-206ENST00000581631 CKS2P33552 79 aa0.32□□□□□ -2.36
SMCHD1-206ENST00000581631 FOXA3P55318 350 aaPredicted RBP0.32□□□□□ -2.36
SMCHD1-206ENST00000581631 BLCAPP62952 87 aa0.32□□□□□ -2.36
SMCHD1-206ENST00000581631 ALX1Q15699 326 aa0.32□□□□□ -2.36
SMCHD1-206ENST00000581631 NEDD8Q15843 81 aa0.32□□□□□ -2.36
SMCHD1-206ENST00000581631 HSD17B12Q53GQ0 312 aa0.32□□□□□ -2.36
SMCHD1-206ENST00000581631 C10orf99Q6UWK7 81 aa0.32□□□□□ -2.36
SMCHD1-206ENST00000581631 HRCT1Q6UXD1 115 aa0.32□□□□□ -2.36
SMCHD1-206ENST00000581631 IDO2Q6ZQW0 420 aa0.32□□□□□ -2.36
SMCHD1-206ENST00000581631 Q6ZQY7 126 aa0.32□□□□□ -2.36
SMCHD1-206ENST00000581631 KRTAP19-3Q7Z4W3 81 aa0.32□□□□□ -2.36
SMCHD1-206ENST00000581631 NDUFA11Q86Y39 141 aa0.32□□□□□ -2.36
SMCHD1-206ENST00000581631 ATOH7Q8N100 152 aa0.32□□□□□ -2.36
SMCHD1-206ENST00000581631 BRK1Q8WUW1 75 aa0.32□□□□□ -2.36
SMCHD1-206ENST00000581631 PPP1R1CQ8WVI7 109 aa0.32□□□□□ -2.36
SMCHD1-206ENST00000581631 LZICQ8WZA0 190 aa0.32□□□□□ -2.36
SMCHD1-206ENST00000581631 WFDC10AQ9H1F0 79 aa0.32□□□□□ -2.36
SMCHD1-206ENST00000581631 TAS2R8Q9NYW2 309 aa0.32□□□□□ -2.36
SMCHD1-206ENST00000581631 MRPL35Q9NZE8 188 aaKnown RBP0.32□□□□□ -2.36
SMCHD1-206ENST00000581631 METTL1Q9UBP6 276 aaKnown RBP0.32□□□□□ -2.36
SMCHD1-206ENST00000581631 CDK12Q9NYV4 1490 aaPredicted RBP0.32□□□□□ -2.36
SMCHD1-206ENST00000581631 DOCK11Q5JSL3 2073 aa0.32□□□□□ -2.36
SMCHD1-206ENST00000581631 CCDC171Q6TFL3 1326 aa0.32□□□□□ -2.36
SMCHD1-206ENST00000581631 LOC285556D6RIA3 1793 aa0.32□□□□□ -2.36
SMCHD1-206ENST00000581631 RBBP6Q7Z6E9 1792 aaKnown RBP0.32□□□□□ -2.36
SMCHD1-206ENST00000581631 ARFGEF1Q9Y6D6 1849 aa0.31□□□□□ -2.36
SMCHD1-206ENST00000581631 DISP2A7MBM2 1401 aa0.31□□□□□ -2.36
SMCHD1-206ENST00000581631 ARHGAP31Q2M1Z3 1444 aa0.31□□□□□ -2.36
SMCHD1-206ENST00000581631 PI4KAP42356 2102 aa0.31□□□□□ -2.36
SMCHD1-206ENST00000581631 NRXN2Q9P2S2 1712 aa0.31□□□□□ -2.36
SMCHD1-206ENST00000581631 TRAV23DV6A0A075B6W5 121 aa0.31□□□□□ -2.36
SMCHD1-206ENST00000581631 IGHV1-24A0A0C4DH33 117 aa0.31□□□□□ -2.36
SMCHD1-206ENST00000581631 TRBV30A0A0K0K1B3 111 aa0.31□□□□□ -2.36
SMCHD1-206ENST00000581631 TMEM30CPA0ZSE6 113 aa0.31□□□□□ -2.36
SMCHD1-206ENST00000581631 HIGD1CA8MV81 97 aa0.31□□□□□ -2.36
SMCHD1-206ENST00000581631 C9JAW5 83 aa0.31□□□□□ -2.36
SMCHD1-206ENST00000581631 PHGR1C9JFL3 82 aa0.31□□□□□ -2.36
SMCHD1-206ENST00000581631 MCRIP1C9JLW8 97 aa0.31□□□□□ -2.36
SMCHD1-206ENST00000581631 CCDC179H3BU77 68 aa0.31□□□□□ -2.36
SMCHD1-206ENST00000581631 J3QR89 54 aa0.31□□□□□ -2.36
SMCHD1-206ENST00000581631 CDC42EP2O14613 210 aa0.31□□□□□ -2.36
SMCHD1-206ENST00000581631 TNFSF15O95150 251 aa0.31□□□□□ -2.36
SMCHD1-206ENST00000581631 IGF2P01344 180 aa0.31□□□□□ -2.36
SMCHD1-206ENST00000581631 APOC1P02654 83 aa0.31□□□□□ -2.36
SMCHD1-206ENST00000581631 TCRAP04437 139 aa0.31□□□□□ -2.36
SMCHD1-206ENST00000581631 PAEPP09466 180 aa0.31□□□□□ -2.36
SMCHD1-206ENST00000581631 SLC25A4P12235 298 aa0.31□□□□□ -2.36
SMCHD1-206ENST00000581631 HLA-DRB4P13762 266 aa0.31□□□□□ -2.36
SMCHD1-206ENST00000581631 ADCYAP1P18509 176 aa0.31□□□□□ -2.36
SMCHD1-206ENST00000581631 EVI2AP22794 236 aa0.31□□□□□ -2.36
SMCHD1-206ENST00000581631 CMPK1P30085 196 aa0.31□□□□□ -2.36
SMCHD1-206ENST00000581631 EFNA4P52798 201 aa0.31□□□□□ -2.36
SMCHD1-206ENST00000581631 PCBD1P61457 104 aa0.31□□□□□ -2.36
SMCHD1-206ENST00000581631 NCS1P62166 190 aa0.31□□□□□ -2.36
SMCHD1-206ENST00000581631 S100A12P80511 92 aa0.31□□□□□ -2.36
SMCHD1-206ENST00000581631 RHOHQ15669 191 aa0.31□□□□□ -2.36
SMCHD1-206ENST00000581631 KRTAP21-1Q3LI58 79 aa0.31□□□□□ -2.36
SMCHD1-206ENST00000581631 OCIAD2Q56VL3 154 aa0.31□□□□□ -2.36
SMCHD1-206ENST00000581631 SPRNQ5BIV9 151 aa0.31□□□□□ -2.36
SMCHD1-206ENST00000581631 TMEM91Q6ZNR0 172 aa0.31□□□□□ -2.36
SMCHD1-206ENST00000581631 Q6ZS92 163 aa0.31□□□□□ -2.36
SMCHD1-206ENST00000581631 ZCCHC23Q6ZST2 131 aa0.31□□□□□ -2.36
SMCHD1-206ENST00000581631 DEFB132Q7Z7B7 95 aa0.31□□□□□ -2.36
SMCHD1-206ENST00000581631 TEX29Q8N6K0 151 aa0.31□□□□□ -2.36
SMCHD1-206ENST00000581631 OTOSQ8NHW6 89 aa0.31□□□□□ -2.36
SMCHD1-206ENST00000581631 DMAC1Q96GE9 116 aa0.31□□□□□ -2.36
SMCHD1-206ENST00000581631 NABP2Q9BQ15 211 aa0.31□□□□□ -2.36
SMCHD1-206ENST00000581631 LPAR5Q9H1C0 372 aa0.31□□□□□ -2.36
SMCHD1-206ENST00000581631 SLC35B3Q9H1N7 401 aa0.31□□□□□ -2.36
SMCHD1-206ENST00000581631 TAF9BQ9HBM6 251 aa0.31□□□□□ -2.36
SMCHD1-206ENST00000581631 SAR1AQ9NR31 198 aa0.31□□□□□ -2.36
SMCHD1-206ENST00000581631 HIGD1AQ9Y241 93 aa0.31□□□□□ -2.36
SMCHD1-206ENST00000581631 HLA-DRB4X5D2U9 266 aa0.31□□□□□ -2.36
SMCHD1-206ENST00000581631 F5P12259 2224 aa0.31□□□□□ -2.36
SMCHD1-206ENST00000581631 CADP27708 2225 aa0.31□□□□□ -2.36
SMCHD1-206ENST00000581631 SIPA1L3O60292 1781 aaPredicted RBP0.31□□□□□ -2.36
SMCHD1-206ENST00000581631 ZNF462Q96JM2 2506 aa0.31□□□□□ -2.36
SMCHD1-206ENST00000581631 FOCADQ5VW36 1801 aa0.31□□□□□ -2.36
SMCHD1-206ENST00000581631 PATJQ8NI35 1801 aa0.31□□□□□ -2.36
SMCHD1-206ENST00000581631 ARHGEF10O15013 1369 aa0.31□□□□□ -2.36
SMCHD1-206ENST00000581631 LRP5O75197 1615 aa0.31□□□□□ -2.36
SMCHD1-206ENST00000581631 TANC1Q9C0D5 1861 aa0.31□□□□□ -2.36
SMCHD1-206ENST00000581631 BLMP54132 1417 aaPredicted RBP0.3□□□□□ -2.36
SMCHD1-206ENST00000581631 MYOM3Q5VTT5 1437 aa0.3□□□□□ -2.36
SMCHD1-206ENST00000581631 UBR4Q5T4S7 5183 aa0.3□□□□□ -2.36
SMCHD1-206ENST00000581631 ERCC6Q03468 1493 aa0.3□□□□□ -2.36
SMCHD1-206ENST00000581631 CACNA1EQ15878 2313 aa0.3□□□□□ -2.36
Retrieved 100 of 20,778 RNA–protein pairs in 96.6 ms