RNA–Protein interactions for RNA: ENST00000581113.6

NF1-220, Transcript of neurofibromin 1, humanhuman

TSL 5

Gene NF1, Length 1,464 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NF1-220ENST00000581113 SDF2Q99470 211 aa2.55□□□□□ -2
NF1-220ENST00000581113 IMUPQ9GZP8 106 aa2.55□□□□□ -2
NF1-220ENST00000581113 CBLN4Q9NTU7 201 aa2.55□□□□□ -2
NF1-220ENST00000581113 CKLFQ9UBR5 152 aa2.55□□□□□ -2
NF1-220ENST00000581113 AK3Q9UIJ7 227 aa2.55□□□□□ -2
NF1-220ENST00000581113 BAIAP2Q9UQB8 552 aa2.55□□□□□ -2
NF1-220ENST00000581113 NAV3Q8IVL0 2385 aa2.55□□□□□ -2
NF1-220ENST00000581113 HRNRQ86YZ3 2850 aaPredicted RBP2.55□□□□□ -2
NF1-220ENST00000581113 ABCA2Q9BZC7 2435 aa2.55□□□□□ -2
NF1-220ENST00000581113 MPDZO75970 2070 aa2.54□□□□□ -2
NF1-220ENST00000581113 IGHV3-15A0A0B4J1V0 119 aa2.54□□□□□ -2
NF1-220ENST00000581113 IZUMO1RA6ND01 250 aa2.54□□□□□ -2
NF1-220ENST00000581113 TMEM212A6NML5 194 aa2.54□□□□□ -2
NF1-220ENST00000581113 C9JCJ5 164 aa2.54□□□□□ -2
NF1-220ENST00000581113 BUB1B-PAK6H3BSN5 160 aa2.54□□□□□ -2
NF1-220ENST00000581113 UBE2L6O14933 153 aa2.54□□□□□ -2
NF1-220ENST00000581113 CPSF4O95639 269 aaKnown RBP2.54□□□□□ -2
NF1-220ENST00000581113 ZNF688P0C7X2 276 aa2.54□□□□□ -2
NF1-220ENST00000581113 TLX1NBP0CAT3 122 aa2.54□□□□□ -2
NF1-220ENST00000581113 FABP2P12104 132 aa2.54□□□□□ -2
NF1-220ENST00000581113 S100A3P33764 101 aa2.54□□□□□ -2
NF1-220ENST00000581113 RPL30P62888 115 aaKnown RBP2.54□□□□□ -2
NF1-220ENST00000581113 AADACL3Q5VUY0 350 aa2.54□□□□□ -2
NF1-220ENST00000581113 SLC25A34Q6PIV7 304 aa2.54□□□□□ -2
NF1-220ENST00000581113 PP632Q6XCG6 107 aa2.54□□□□□ -2
NF1-220ENST00000581113 SCXQ7RTU7 201 aa2.54□□□□□ -2
NF1-220ENST00000581113 MED12LQ86YW9 2145 aa2.54□□□□□ -2
NF1-220ENST00000581113 CLECL1Q8IZS7 167 aa2.54□□□□□ -2
NF1-220ENST00000581113 TMEM256Q8N2U0 113 aa2.54□□□□□ -2
NF1-220ENST00000581113 C3orf22Q8N5N4 141 aa2.54□□□□□ -2
NF1-220ENST00000581113 TERB2Q8NHR7 220 aa2.54□□□□□ -2
NF1-220ENST00000581113 ZNF563Q8TA94 476 aa2.54□□□□□ -2
NF1-220ENST00000581113 SFT2D1Q8WV19 159 aa2.54□□□□□ -2
NF1-220ENST00000581113 RBMXL1Q96E39 390 aaKnown RBP2.54□□□□□ -2
NF1-220ENST00000581113 SHANK2-AS3Q9BTD1 123 aa2.54□□□□□ -2
NF1-220ENST00000581113 DPY30Q9C005 99 aa2.54□□□□□ -2
NF1-220ENST00000581113 LAMTOR3Q9UHA4 124 aa2.54□□□□□ -2
NF1-220ENST00000581113 FLNAP21333 2647 aaKnown RBP2.54□□□□□ -2
NF1-220ENST00000581113 MAP1AP78559 2803 aaPredicted RBP2.54□□□□□ -2
NF1-220ENST00000581113 TRAV38-1A0A0B4J264 116 aa2.53□□□□□ -2
NF1-220ENST00000581113 A0A1B0GVX0 72 aa2.53□□□□□ -2
NF1-220ENST00000581113 LEUTXA8MZ59 168 aa2.53□□□□□ -2
NF1-220ENST00000581113 ZNF670-ZNF695F2Z2N8 137 aa2.53□□□□□ -2
NF1-220ENST00000581113 TMEM256-PLSCR3K7ERE1 68 aa2.53□□□□□ -2
NF1-220ENST00000581113 K7ERJ3 54 aa2.53□□□□□ -2
NF1-220ENST00000581113 HMGN4O00479 90 aa2.53□□□□□ -2
NF1-220ENST00000581113 RBFOX2O43251 390 aaKnown RBP eCLIP2.53□□□□□ -2
NF1-220ENST00000581113 MAS1P04201 325 aa2.53□□□□□ -2
NF1-220ENST00000581113 GPX1P07203 203 aa2.53□□□□□ -2
NF1-220ENST00000581113 SRP19P09132 144 aaKnown RBP2.53□□□□□ -2
NF1-220ENST00000581113 CGB3P0DN86 165 aa2.53□□□□□ -2
NF1-220ENST00000581113 CGB7P0DN87 165 aa2.53□□□□□ -2
NF1-220ENST00000581113 HIST1H2BOP23527 126 aa2.53□□□□□ -2
NF1-220ENST00000581113 CRYBB3P26998 211 aa2.53□□□□□ -2
NF1-220ENST00000581113 HIST1H2BBP33778 126 aa2.53□□□□□ -2
NF1-220ENST00000581113 SDC2P34741 201 aa2.53□□□□□ -2
NF1-220ENST00000581113 HIST1H2BDP58876 126 aa2.53□□□□□ -2
NF1-220ENST00000581113 HIST1H2BCP62807 126 aa2.53□□□□□ -2
NF1-220ENST00000581113 RHOGP84095 191 aa2.53□□□□□ -2
NF1-220ENST00000581113 FUT5Q11128 374 aa2.53□□□□□ -2
NF1-220ENST00000581113 HES1Q14469 280 aa2.53□□□□□ -2
NF1-220ENST00000581113 HIST2H2BEQ16778 126 aa2.53□□□□□ -2
NF1-220ENST00000581113 RRN3P1Q2M238 152 aa2.53□□□□□ -2
NF1-220ENST00000581113 HIST2H2BFQ5QNW6 126 aaPredicted RBP2.53□□□□□ -2
NF1-220ENST00000581113 C1orf140Q5VVS0 124 aa2.53□□□□□ -2
NF1-220ENST00000581113 SSX8Q7RTT4 187 aa2.53□□□□□ -2
NF1-220ENST00000581113 HMGN2P46Q86SG4 172 aa2.53□□□□□ -2
NF1-220ENST00000581113 LINC00471Q8N535 108 aa2.53□□□□□ -2
NF1-220ENST00000581113 RPS4Y2Q8TD47 263 aa2.53□□□□□ -2
NF1-220ENST00000581113 HIST1H2BHQ93079 126 aa2.53□□□□□ -2
NF1-220ENST00000581113 MUCL1Q96DR8 90 aa2.53□□□□□ -2
NF1-220ENST00000581113 HIST1H2BNQ99877 126 aa2.53□□□□□ -2
NF1-220ENST00000581113 HIST1H2BMQ99879 126 aa2.53□□□□□ -2
NF1-220ENST00000581113 PSMG3Q9BT73 122 aaPredicted RBP2.53□□□□□ -2
NF1-220ENST00000581113 MARCOQ9UEW3 520 aaPredicted RBP2.53□□□□□ -2
NF1-220ENST00000581113 NIPBLQ6KC79 2804 aaeCLIP2.53□□□□□ -2
NF1-220ENST00000581113 ROS1P08922 2347 aa2.53□□□□□ -2
NF1-220ENST00000581113 FN1P02751 2386 aaKnown RBP2.52□□□□□ -2.01
NF1-220ENST00000581113 A0A1W2PP18 115 aa2.52□□□□□ -2.01
NF1-220ENST00000581113 TMEM218A2RU14 115 aa2.52□□□□□ -2.01
NF1-220ENST00000581113 GGT3PA6NGU5 568 aa2.52□□□□□ -2.01
NF1-220ENST00000581113 GGTLC3B5MD39 225 aa2.52□□□□□ -2.01
NF1-220ENST00000581113 CCDC179H3BU77 68 aa2.52□□□□□ -2.01
NF1-220ENST00000581113 SOCS1O15524 211 aa2.52□□□□□ -2.01
NF1-220ENST00000581113 MRPL33O75394 65 aaKnown RBP2.52□□□□□ -2.01
NF1-220ENST00000581113 SCO1O75880 301 aa2.52□□□□□ -2.01
NF1-220ENST00000581113 IFNA17P01571 189 aa2.52□□□□□ -2.01
NF1-220ENST00000581113 ZNF728P0DKX0 622 aa2.52□□□□□ -2.01
NF1-220ENST00000581113 TMBIM6P55061 237 aa2.52□□□□□ -2.01
NF1-220ENST00000581113 TAS2R20P59543 309 aa2.52□□□□□ -2.01
NF1-220ENST00000581113 FGF12P61328 243 aa2.52□□□□□ -2.01
NF1-220ENST00000581113 DIAPH2-AS1Q14236 149 aa2.52□□□□□ -2.01
NF1-220ENST00000581113 LINC00305Q7Z4B0 112 aa2.52□□□□□ -2.01
NF1-220ENST00000581113 SPATA12Q7Z6I5 190 aa2.52□□□□□ -2.01
NF1-220ENST00000581113 C8orf59Q8N0T1 100 aaPredicted RBP2.52□□□□□ -2.01
NF1-220ENST00000581113 ZNF436-AS1Q8NC38 126 aaPredicted RBP2.52□□□□□ -2.01
NF1-220ENST00000581113 OR8D4Q8NGM9 314 aa2.52□□□□□ -2.01
NF1-220ENST00000581113 CIRBP-AS1Q8TBR5 109 aa2.52□□□□□ -2.01
NF1-220ENST00000581113 MGLLQ99685 303 aa2.52□□□□□ -2.01
NF1-220ENST00000581113 REG4Q9BYZ8 158 aa2.52□□□□□ -2.01
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms