RNA–Protein interactions for RNA: ENST00000580875.1

SNX11-207, Transcript of sorting nexin 11, humanhuman

TSL 2

Gene SNX11, Length 704 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX11-207ENST00000580875 HIST1H2BAQ96A08 127 aa14.55□□□□□ -0.08
SNX11-207ENST00000580875 ZNF331Q9NQX6 463 aaPredicted RBP14.55□□□□□ -0.08
SNX11-207ENST00000580875 LINC00588Q9Y4M8 146 aa14.55□□□□□ -0.08
SNX11-207ENST00000580875 AKR1C3P42330 323 aa14.54□□□□□ -0.08
SNX11-207ENST00000580875 ZNF674Q2M3X9 581 aa14.54□□□□□ -0.08
SNX11-207ENST00000580875 RNASE8Q8TDE3 154 aaKnown RBP14.54□□□□□ -0.08
SNX11-207ENST00000580875 PARLQ9H300 379 aa14.54□□□□□ -0.08
SNX11-207ENST00000580875 EPDR1Q9UM22 224 aa14.54□□□□□ -0.08
SNX11-207ENST00000580875 RPH3ALQ9UNE2 315 aa14.54□□□□□ -0.08
SNX11-207ENST00000580875 PRELID1Q9Y255 219 aa14.54□□□□□ -0.08
SNX11-207ENST00000580875 CARHSP1Q9Y2V2 147 aaKnown RBP14.54□□□□□ -0.08
SNX11-207ENST00000580875 H7BYZ3 331 aa14.53□□□□□ -0.08
SNX11-207ENST00000580875 CDK2AP2O75956 126 aa14.53□□□□□ -0.08
SNX11-207ENST00000580875 CSN1S1P47710 185 aa14.53□□□□□ -0.08
SNX11-207ENST00000580875 GNG5P63218 68 aa14.53□□□□□ -0.08
SNX11-207ENST00000580875 FAM74A3Q4VXF1 159 aa14.53□□□□□ -0.08
SNX11-207ENST00000580875 C10orf91Q5T1B1 145 aa14.53□□□□□ -0.08
SNX11-207ENST00000580875 TMEM263Q8WUH6 116 aaKnown RBP14.53□□□□□ -0.08
SNX11-207ENST00000580875 SMIM7Q9BQ49 75 aa14.53□□□□□ -0.08
SNX11-207ENST00000580875 NOP10Q9NPE3 64 aaKnown RBP14.53□□□□□ -0.08
SNX11-207ENST00000580875 ZNF727A8MUV8 499 aa14.52□□□□□ -0.09
SNX11-207ENST00000580875 PRB4P10163 310 aaPredicted RBP14.52□□□□□ -0.09
SNX11-207ENST00000580875 OR10J6PQ8NGY7 276 aa14.52□□□□□ -0.09
SNX11-207ENST00000580875 C20orf144Q9BQM9 153 aa14.52□□□□□ -0.09
SNX11-207ENST00000580875 APOC3P02656 99 aa14.51□□□□□ -0.09
SNX11-207ENST00000580875 TCRAP04437 139 aa14.51□□□□□ -0.09
SNX11-207ENST00000580875 ARL6IP6Q8N6S5 226 aa14.51□□□□□ -0.09
SNX11-207ENST00000580875 MRPL53Q96EL3 112 aaKnown RBP14.51□□□□□ -0.09
SNX11-207ENST00000580875 K7EQM0 130 aa14.5□□□□□ -0.09
SNX11-207ENST00000580875 M0R3E3 92 aa14.5□□□□□ -0.09
SNX11-207ENST00000580875 DERL1Q9BUN8 251 aa14.5□□□□□ -0.09
SNX11-207ENST00000580875 SERTM2A0A1B0GWG4 89 aa14.49□□□□□ -0.09
SNX11-207ENST00000580875 RPL35P42766 123 aaKnown RBP14.49□□□□□ -0.09
SNX11-207ENST00000580875 OR5I1Q13606 314 aa14.49□□□□□ -0.09
SNX11-207ENST00000580875 Q9H8V8 135 aa14.49□□□□□ -0.09
SNX11-207ENST00000580875 NAT8Q9UHE5 227 aa14.49□□□□□ -0.09
SNX11-207ENST00000580875 DIRC3C9JPN6 131 aa14.48□□□□□ -0.09
SNX11-207ENST00000580875 S100A9P06702 114 aaKnown RBP14.48□□□□□ -0.09
SNX11-207ENST00000580875 UBE2G1P62253 170 aa14.48□□□□□ -0.09
SNX11-207ENST00000580875 KIR3DS1Q14943 382 aa14.48□□□□□ -0.09
SNX11-207ENST00000580875 GOLT1AQ6ZVE7 132 aa14.48□□□□□ -0.09
SNX11-207ENST00000580875 SVBPQ8N300 66 aa14.48□□□□□ -0.09
SNX11-207ENST00000580875 LINC00612Q8N6U2 182 aa14.48□□□□□ -0.09
SNX11-207ENST00000580875 FMC1Q96HJ9 113 aa14.48□□□□□ -0.09
SNX11-207ENST00000580875 HSPG2P98160 4391 aa14.48□□□□□ -0.09
SNX11-207ENST00000580875 TRAV26-1A0A087WT03 109 aa14.47□□□□□ -0.09
SNX11-207ENST00000580875 C9JCJ5 164 aa14.47□□□□□ -0.09
SNX11-207ENST00000580875 GFI1BQ5VTD9 330 aa14.47□□□□□ -0.09
SNX11-207ENST00000580875 MAPKAPK5-AS1Q8N8E1 139 aa14.47□□□□□ -0.09
SNX11-207ENST00000580875 TVP23CQ96ET8 276 aa14.47□□□□□ -0.09
SNX11-207ENST00000580875 PNRC1Q12796 327 aaPredicted RBP14.46□□□□□ -0.09
SNX11-207ENST00000580875 TMEM183BQ1AE95 376 aa14.46□□□□□ -0.09
SNX11-207ENST00000580875 TMEM241Q24JQ0 296 aa14.46□□□□□ -0.09
SNX11-207ENST00000580875 CENPWQ5EE01 88 aa14.46□□□□□ -0.09
SNX11-207ENST00000580875 TTC32Q5I0X7 151 aa14.46□□□□□ -0.09
SNX11-207ENST00000580875 TMEM75Q8N9X5 138 aa14.46□□□□□ -0.09
SNX11-207ENST00000580875 PRAC2D3DTV9 90 aa14.45□□□□□ -0.1
SNX11-207ENST00000580875 SNAPINO95295 136 aa14.45□□□□□ -0.1
SNX11-207ENST00000580875 GNG4P50150 75 aa14.45□□□□□ -0.1
SNX11-207ENST00000580875 KLF12Q9Y4X4 402 aa14.45□□□□□ -0.1
SNX11-207ENST00000580875 IGKV2-40A0A087WW87 121 aaPredicted RBP14.44□□□□□ -0.1
SNX11-207ENST00000580875 TRAV34A0A0B4J273 112 aa14.44□□□□□ -0.1
SNX11-207ENST00000580875 A0A0J9YY99 117 aa14.44□□□□□ -0.1
SNX11-207ENST00000580875 GAGE12BA1L429 117 aa14.44□□□□□ -0.1
SNX11-207ENST00000580875 FBLL1A6NHQ2 334 aaKnown RBP14.44□□□□□ -0.1
SNX11-207ENST00000580875 M0R036 132 aa14.44□□□□□ -0.1
SNX11-207ENST00000580875 GAGE7O76087 117 aa14.44□□□□□ -0.1
SNX11-207ENST00000580875 IGKV2D-40P01614 121 aaPredicted RBP14.44□□□□□ -0.1
SNX11-207ENST00000580875 GAGE12FP0CL80 117 aa14.44□□□□□ -0.1
SNX11-207ENST00000580875 GAGE12GP0CL81 117 aa14.44□□□□□ -0.1
SNX11-207ENST00000580875 GAGE12IP0CL82 117 aa14.44□□□□□ -0.1
SNX11-207ENST00000580875 LINC00479Q96M42 142 aa14.44□□□□□ -0.1
SNX11-207ENST00000580875 SDF2L1Q9HCN8 221 aa14.44□□□□□ -0.1
SNX11-207ENST00000580875 TRBV20OR9-2A0A075B6H5 130 aa14.43□□□□□ -0.1
SNX11-207ENST00000580875 RBAKDNA6NC62 111 aa14.43□□□□□ -0.1
SNX11-207ENST00000580875 SNURFLB1AK76 121 aa14.43□□□□□ -0.1
SNX11-207ENST00000580875 HOXA5P20719 270 aa14.43□□□□□ -0.1
SNX11-207ENST00000580875 SPATA12Q7Z6I5 190 aa14.43□□□□□ -0.1
SNX11-207ENST00000580875 Q86TA4 180 aa14.43□□□□□ -0.1
SNX11-207ENST00000580875 UPK3BQ9BT76 320 aa14.43□□□□□ -0.1
SNX11-207ENST00000580875 KRTAP1-5Q9BYS1 174 aa14.43□□□□□ -0.1
SNX11-207ENST00000580875 LY96Q9Y6Y9 160 aa14.43□□□□□ -0.1
SNX11-207ENST00000580875 LRP1BQ9NZR2 4599 aa14.42□□□□□ -0.1
SNX11-207ENST00000580875 TRBV6-1A0A0K0K1D8 114 aa14.42□□□□□ -0.1
SNX11-207ENST00000580875 H3BNG1 76 aa14.42□□□□□ -0.1
SNX11-207ENST00000580875 LEPP41159 167 aa14.42□□□□□ -0.1
SNX11-207ENST00000580875 FLI1Q01543 452 aaPredicted RBP14.42□□□□□ -0.1
SNX11-207ENST00000580875 ADIRFQ15847 76 aa14.42□□□□□ -0.1
SNX11-207ENST00000580875 CLRN3Q8NCR9 226 aa14.42□□□□□ -0.1
SNX11-207ENST00000580875 ODF3Q96PU9 254 aa14.42□□□□□ -0.1
SNX11-207ENST00000580875 TRAV8-1A0A0A6YYK1 113 aa14.41□□□□□ -0.1
SNX11-207ENST00000580875 A0A1W2PPQ1 181 aa14.41□□□□□ -0.1
SNX11-207ENST00000580875 J3KRW8 73 aa14.41□□□□□ -0.1
SNX11-207ENST00000580875 CT45A10P0DMU9 189 aa14.41□□□□□ -0.1
SNX11-207ENST00000580875 RPL23P62829 140 aaKnown RBP14.41□□□□□ -0.1
SNX11-207ENST00000580875 ESRGQ1W209 222 aa14.41□□□□□ -0.1
SNX11-207ENST00000580875 PRNTQ86SH4 94 aa14.41□□□□□ -0.1
SNX11-207ENST00000580875 BAGE2Q86Y30 109 aa14.41□□□□□ -0.1
SNX11-207ENST00000580875 SMIM12Q96EX1 92 aa14.41□□□□□ -0.1
SNX11-207ENST00000580875 SGK494Q96LW2 274 aa14.41□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 48.5 ms