RNA–Protein interactions for RNA: ENST00000580741.5

LINC00271-207, long intergenic non-protein coding RNA 271, humanhuman

TSL 1 (best)

Gene LINC00271, Length 596 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00271-207ENST00000580741 MAP1LC3BQ9GZQ8 125 aa18.59■□□□□ 0.57
LINC00271-207ENST00000580741 DYNC1H1Q14204 4646 aaKnown RBP18.59■□□□□ 0.57
LINC00271-207ENST00000580741 A0A096LPF7 62 aa18.58■□□□□ 0.56
LINC00271-207ENST00000580741 TRAV34A0A0B4J273 112 aa18.58■□□□□ 0.56
LINC00271-207ENST00000580741 PRSS29PA6NIE9 313 aa18.58■□□□□ 0.56
LINC00271-207ENST00000580741 IFNA7P01567 189 aa18.58■□□□□ 0.56
LINC00271-207ENST00000580741 SFTA3P0C7M3 94 aa18.58■□□□□ 0.56
LINC00271-207ENST00000580741 C11orf21Q9P2W6 132 aa18.58■□□□□ 0.56
LINC00271-207ENST00000580741 PKHD1P08F94 4074 aa18.58■□□□□ 0.56
LINC00271-207ENST00000580741 NBDYA0A0U1RRE5 68 aa18.57■□□□□ 0.56
LINC00271-207ENST00000580741 HMSDA8MTL9 139 aa18.57■□□□□ 0.56
LINC00271-207ENST00000580741 PAX4O43316 350 aa18.57■□□□□ 0.56
LINC00271-207ENST00000580741 GCGP01275 180 aa18.57■□□□□ 0.56
LINC00271-207ENST00000580741 FHITP49789 147 aa18.57■□□□□ 0.56
LINC00271-207ENST00000580741 FHL2Q14192 279 aa18.57■□□□□ 0.56
LINC00271-207ENST00000580741 SDF2L1Q9HCN8 221 aa18.57■□□□□ 0.56
LINC00271-207ENST00000580741 DNAH11Q96DT5 4516 aa18.56■□□□□ 0.56
LINC00271-207ENST00000580741 FAM74A7A6NL05 159 aa18.56■□□□□ 0.56
LINC00271-207ENST00000580741 C1orf134Q5TEV5 83 aa18.56■□□□□ 0.56
LINC00271-207ENST00000580741 RASL10AQ92737 203 aa18.56■□□□□ 0.56
LINC00271-207ENST00000580741 ZNF479Q96JC4 524 aa18.56■□□□□ 0.56
LINC00271-207ENST00000580741 SMUG1Q53HV7 270 aa18.55■□□□□ 0.56
LINC00271-207ENST00000580741 KCNS1Q96KK3 526 aa18.55■□□□□ 0.56
LINC00271-207ENST00000580741 ZNF471Q9BX82 626 aaPredicted RBP18.55■□□□□ 0.56
LINC00271-207ENST00000580741 PRO0255Q9UI72 69 aa18.55■□□□□ 0.56
LINC00271-207ENST00000580741 A0A1B0GVY2 172 aa18.54■□□□□ 0.56
LINC00271-207ENST00000580741 PEX7O00628 323 aa18.54■□□□□ 0.56
LINC00271-207ENST00000580741 CRYBA4P53673 196 aa18.54■□□□□ 0.56
LINC00271-207ENST00000580741 ZFP69Q49AA0 526 aa18.54■□□□□ 0.56
LINC00271-207ENST00000580741 HHLA3Q9XRX5 114 aa18.54■□□□□ 0.56
LINC00271-207ENST00000580741 PKD1P98161 4303 aa18.54■□□□□ 0.56
LINC00271-207ENST00000580741 TRGV4A0A0C4DH28 118 aa18.53■□□□□ 0.56
LINC00271-207ENST00000580741 A0A0D9SG52 128 aa18.53■□□□□ 0.56
LINC00271-207ENST00000580741 KANTRA0A1W2PQU2 76 aa18.53■□□□□ 0.56
LINC00271-207ENST00000580741 M0R2P5 195 aa18.53■□□□□ 0.56
LINC00271-207ENST00000580741 BCL2L11O43521 198 aa18.53■□□□□ 0.56
LINC00271-207ENST00000580741 Q9H8V8 135 aa18.53■□□□□ 0.56
LINC00271-207ENST00000580741 ICOSQ9Y6W8 199 aa18.53■□□□□ 0.56
LINC00271-207ENST00000580741 PFN1P07737 140 aaKnown RBP18.52■□□□□ 0.56
LINC00271-207ENST00000580741 SOHLH1Q5JUK2 328 aa18.52■□□□□ 0.56
LINC00271-207ENST00000580741 MRPS16Q9Y3D3 137 aaKnown RBP18.52■□□□□ 0.56
LINC00271-207ENST00000580741 ARL2-SNX15V9GYD0 113 aa18.52■□□□□ 0.56
LINC00271-207ENST00000580741 FBLL1A6NHQ2 334 aaKnown RBP18.51■□□□□ 0.55
LINC00271-207ENST00000580741 SAPCD1Q5SSQ6 148 aa18.51■□□□□ 0.55
LINC00271-207ENST00000580741 FAM213BQ8TBF2 198 aa18.51■□□□□ 0.55
LINC00271-207ENST00000580741 A0A1B0GV50 99 aa18.5■□□□□ 0.55
LINC00271-207ENST00000580741 SEC11BP0C7V7 166 aa18.5■□□□□ 0.55
LINC00271-207ENST00000580741 PPT1P50897 306 aa18.5■□□□□ 0.55
LINC00271-207ENST00000580741 SLAQ13239 276 aa18.5■□□□□ 0.55
LINC00271-207ENST00000580741 Q86TA4 180 aa18.5■□□□□ 0.55
LINC00271-207ENST00000580741 STOML3Q8TAV4 291 aa18.5■□□□□ 0.55
LINC00271-207ENST00000580741 UPK3BQ9BT76 320 aa18.5■□□□□ 0.55
LINC00271-207ENST00000580741 TRAV4A0A0B4J268 109 aa18.49■□□□□ 0.55
LINC00271-207ENST00000580741 OR4C5Q8NGB2 326 aa18.49■□□□□ 0.55
LINC00271-207ENST00000580741 HIST1H2BAQ96A08 127 aa18.49■□□□□ 0.55
LINC00271-207ENST00000580741 NKX6-2Q9C056 277 aaPredicted RBP18.49■□□□□ 0.55
LINC00271-207ENST00000580741 C9JCJ5 164 aa18.48■□□□□ 0.55
LINC00271-207ENST00000580741 CST9LP1Q5W188 147 aa18.48■□□□□ 0.55
LINC00271-207ENST00000580741 TMUB2Q71RG4 321 aa18.48■□□□□ 0.55
LINC00271-207ENST00000580741 KRTAP1-5Q9BYS1 174 aa18.48■□□□□ 0.55
LINC00271-207ENST00000580741 HERC2O95714 4834 aa18.48■□□□□ 0.55
LINC00271-207ENST00000580741 PFDN1O60925 122 aa18.47■□□□□ 0.55
LINC00271-207ENST00000580741 C6orf223Q8N319 242 aa18.47■□□□□ 0.55
LINC00271-207ENST00000580741 SFT2D1Q8WV19 159 aa18.47■□□□□ 0.55
LINC00271-207ENST00000580741 UMAD1C9J7I0 102 aa18.45■□□□□ 0.54
LINC00271-207ENST00000580741 PAGE4O60829 102 aa18.45■□□□□ 0.54
LINC00271-207ENST00000580741 MRPL23Q16540 153 aaKnown RBP18.45■□□□□ 0.54
LINC00271-207ENST00000580741 MBD3L1Q8WWY6 194 aa18.45■□□□□ 0.54
LINC00271-207ENST00000580741 C9orf85Q96MD7 179 aa18.45■□□□□ 0.54
LINC00271-207ENST00000580741 IGKV3D-20A0A0C4DH25 116 aa18.44■□□□□ 0.54
LINC00271-207ENST00000580741 GYPEP15421 78 aa18.44■□□□□ 0.54
LINC00271-207ENST00000580741 ZNF876PQ49A33 203 aa18.44■□□□□ 0.54
LINC00271-207ENST00000580741 K7EQD1 137 aa18.43■□□□□ 0.54
LINC00271-207ENST00000580741 RNASE3P12724 160 aaKnown RBP18.43■□□□□ 0.54
LINC00271-207ENST00000580741 DPPA3Q6W0C5 159 aa18.43■□□□□ 0.54
LINC00271-207ENST00000580741 ZC2HC1AQ96GY0 325 aa18.43■□□□□ 0.54
LINC00271-207ENST00000580741 LOC100131303A0A0U1RQF7 123 aa18.42■□□□□ 0.54
LINC00271-207ENST00000580741 FABP5P3A8MUU1 101 aa18.42■□□□□ 0.54
LINC00271-207ENST00000580741 NXPH4O95158 308 aa18.42■□□□□ 0.54
LINC00271-207ENST00000580741 TPT1P13693 172 aaKnown RBP18.42■□□□□ 0.54
LINC00271-207ENST00000580741 UBE2G1P62253 170 aa18.42■□□□□ 0.54
LINC00271-207ENST00000580741 EIF5AP63241 154 aaKnown RBP18.42■□□□□ 0.54
LINC00271-207ENST00000580741 TNP2Q05952 138 aa18.42■□□□□ 0.54
LINC00271-207ENST00000580741 TTC32Q5I0X7 151 aa18.42■□□□□ 0.54
LINC00271-207ENST00000580741 PCNPQ8WW12 178 aaKnown RBP18.42■□□□□ 0.54
LINC00271-207ENST00000580741 KIAA1109Q2LD37 5005 aa18.42■□□□□ 0.54
LINC00271-207ENST00000580741 SRIP30626 198 aa18.41■□□□□ 0.54
LINC00271-207ENST00000580741 LYPD5Q6UWN5 251 aa18.41■□□□□ 0.54
LINC00271-207ENST00000580741 NEGR1Q7Z3B1 354 aa18.41■□□□□ 0.54
LINC00271-207ENST00000580741 FMC1Q96HJ9 113 aa18.41■□□□□ 0.54
LINC00271-207ENST00000580741 PGPEP1LA6NFU8 196 aa18.4■□□□□ 0.54
LINC00271-207ENST00000580741 AKR1C3P42330 323 aa18.4■□□□□ 0.54
LINC00271-207ENST00000580741 CRIP1P50238 77 aa18.4■□□□□ 0.54
LINC00271-207ENST00000580741 ZNF506Q5JVG8 444 aa18.4■□□□□ 0.54
LINC00271-207ENST00000580741 IGHV3-73A0A0B4J1V6 119 aa18.39■□□□□ 0.53
LINC00271-207ENST00000580741 H2AFB1P0C5Y9 115 aa18.39■□□□□ 0.53
LINC00271-207ENST00000580741 CFAP126Q5VTH2 177 aa18.39■□□□□ 0.53
LINC00271-207ENST00000580741 TCEAL7Q9BRU2 100 aa18.39■□□□□ 0.53
LINC00271-207ENST00000580741 ZFP30Q9Y2G7 519 aa18.39■□□□□ 0.53
LINC00271-207ENST00000580741 M0R036 132 aa18.38■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 58.3 ms