RNA–Protein interactions for RNA: ENST00000579716.2

COPS3-216, Transcript of COP9 signalosome subunit 3, humanhuman

TSL 2

Gene COPS3, Length 419 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS3-216ENST00000579716 EFNA4P52798 201 aa4.59□□□□□ -1.67
COPS3-216ENST00000579716 ESRGQ1W209 222 aa4.59□□□□□ -1.67
COPS3-216ENST00000579716 KRTAP27-1Q3LI81 207 aa4.59□□□□□ -1.67
COPS3-216ENST00000579716 S100A7L2Q5SY68 101 aa4.59□□□□□ -1.67
COPS3-216ENST00000579716 EML6Q6ZMW3 1958 aa4.59□□□□□ -1.67
COPS3-216ENST00000579716 HEATR5AQ86XA9 2040 aa4.59□□□□□ -1.67
COPS3-216ENST00000579716 PFN4Q8NHR9 129 aa4.59□□□□□ -1.67
COPS3-216ENST00000579716 DYNLRB2Q8TF09 96 aa4.59□□□□□ -1.67
COPS3-216ENST00000579716 TTTY13Q9BZ97 58 aa4.59□□□□□ -1.67
COPS3-216ENST00000579716 OBSL1O75147 1896 aa4.58□□□□□ -1.68
COPS3-216ENST00000579716 USP54Q70EL1 1684 aa4.58□□□□□ -1.68
COPS3-216ENST00000579716 ARHGEF5Q12774 1597 aa4.58□□□□□ -1.68
COPS3-216ENST00000579716 IGKV3D-20A0A0C4DH25 116 aa4.58□□□□□ -1.68
COPS3-216ENST00000579716 A0A0J9YXY3 114 aa4.58□□□□□ -1.68
COPS3-216ENST00000579716 SMIM1B2RUZ4 78 aa4.58□□□□□ -1.68
COPS3-216ENST00000579716 SLC25A16P16260 332 aa4.58□□□□□ -1.68
COPS3-216ENST00000579716 ZNF56Q15929 161 aa4.58□□□□□ -1.68
COPS3-216ENST00000579716 ZFAND2AQ8N6M9 145 aa4.58□□□□□ -1.68
COPS3-216ENST00000579716 Q96M85 177 aa4.58□□□□□ -1.68
COPS3-216ENST00000579716 PLA2G12AQ9BZM1 189 aa4.58□□□□□ -1.68
COPS3-216ENST00000579716 C11orf1Q9H5F2 150 aa4.58□□□□□ -1.68
COPS3-216ENST00000579716 DEC1Q9P2X7 70 aa4.58□□□□□ -1.68
COPS3-216ENST00000579716 ARL2-SNX15V9GYD0 113 aa4.58□□□□□ -1.68
COPS3-216ENST00000579716 FER1L5A0AVI2 2057 aa4.58□□□□□ -1.68
COPS3-216ENST00000579716 ALS2Q96Q42 1657 aa4.57□□□□□ -1.68
COPS3-216ENST00000579716 AGLP35573 1532 aa4.57□□□□□ -1.68
COPS3-216ENST00000579716 PTPRMP28827 1452 aa4.57□□□□□ -1.68
COPS3-216ENST00000579716 IGKV1D-17A0A075B6S4 117 aa4.57□□□□□ -1.68
COPS3-216ENST00000579716 LOC285095A0A1B0GVY8 99 aa4.57□□□□□ -1.68
COPS3-216ENST00000579716 IGHV3-30-3P0DP02 117 aa4.57□□□□□ -1.68
COPS3-216ENST00000579716 CCL3P10147 92 aa4.57□□□□□ -1.68
COPS3-216ENST00000579716 Q6P435 159 aa4.57□□□□□ -1.68
COPS3-216ENST00000579716 CAMK2N1Q7Z7J9 78 aa4.57□□□□□ -1.68
COPS3-216ENST00000579716 LINC00269Q8N2A0 174 aa4.57□□□□□ -1.68
COPS3-216ENST00000579716 RPRMLQ8N4K4 120 aa4.57□□□□□ -1.68
COPS3-216ENST00000579716 C7orf33Q8WU49 177 aa4.57□□□□□ -1.68
COPS3-216ENST00000579716 TMEM141Q96I45 108 aa4.57□□□□□ -1.68
COPS3-216ENST00000579716 RETNLBQ9BQ08 111 aa4.57□□□□□ -1.68
COPS3-216ENST00000579716 SMIM7Q9BQ49 75 aa4.57□□□□□ -1.68
COPS3-216ENST00000579716 C8orf17Q9NRJ1 99 aa4.57□□□□□ -1.68
COPS3-216ENST00000579716 MROH2BQ7Z745 1585 aa4.57□□□□□ -1.68
COPS3-216ENST00000579716 ATG2BQ96BY7 2078 aa4.57□□□□□ -1.68
COPS3-216ENST00000579716 IGHV3-21A0A0B4J1V1 117 aa4.56□□□□□ -1.68
COPS3-216ENST00000579716 IGHV3-35A0A0C4DH35 117 aa4.56□□□□□ -1.68
COPS3-216ENST00000579716 IGHV7-4-1A0A0J9YVY3 117 aa4.56□□□□□ -1.68
COPS3-216ENST00000579716 NPYP01303 97 aa4.56□□□□□ -1.68
COPS3-216ENST00000579716 IGLV2-23P01705 113 aa4.56□□□□□ -1.68
COPS3-216ENST00000579716 DSCR4P56555 118 aaPredicted RBP4.56□□□□□ -1.68
COPS3-216ENST00000579716 KLKP1Q107X0 134 aa4.56□□□□□ -1.68
COPS3-216ENST00000579716 DEFB121Q5J5C9 76 aa4.56□□□□□ -1.68
COPS3-216ENST00000579716 NHP2Q9NX24 153 aaKnown RBP4.56□□□□□ -1.68
COPS3-216ENST00000579716 DHRS4-AS1Q9P1J3 65 aa4.56□□□□□ -1.68
COPS3-216ENST00000579716 LINC00474Q9P2X8 69 aa4.56□□□□□ -1.68
COPS3-216ENST00000579716 COL16A1Q07092 1604 aaPredicted RBP4.56□□□□□ -1.68
COPS3-216ENST00000579716 CICQ96RK0 1608 aaPredicted RBP4.56□□□□□ -1.68
COPS3-216ENST00000579716 TSPOAP1O95153 1857 aa4.56□□□□□ -1.68
COPS3-216ENST00000579716 TRPM7Q96QT4 1865 aa4.56□□□□□ -1.68
COPS3-216ENST00000579716 MAST2Q6P0Q8 1798 aa4.55□□□□□ -1.68
COPS3-216ENST00000579716 MICAL3Q7RTP6 2002 aa4.55□□□□□ -1.68
COPS3-216ENST00000579716 ANAPC1Q9H1A4 1944 aa4.55□□□□□ -1.68
COPS3-216ENST00000579716 CYSRT1A8MQ03 144 aa4.55□□□□□ -1.68
COPS3-216ENST00000579716 H7BZZ5 65 aa4.55□□□□□ -1.68
COPS3-216ENST00000579716 IGHV1-69P01742 117 aa4.55□□□□□ -1.68
COPS3-216ENST00000579716 CCL5P13501 91 aa4.55□□□□□ -1.68
COPS3-216ENST00000579716 GCHFRP30047 84 aa4.55□□□□□ -1.68
COPS3-216ENST00000579716 LUZP6Q538Z0 58 aa4.55□□□□□ -1.68
COPS3-216ENST00000579716 CNEP1R1Q8N9A8 125 aa4.55□□□□□ -1.68
COPS3-216ENST00000579716 TIMM21Q9BVV7 248 aa4.55□□□□□ -1.68
COPS3-216ENST00000579716 CYSTM1Q9H1C7 97 aa4.55□□□□□ -1.68
COPS3-216ENST00000579716 TP53TG3Q9ULZ0 132 aa4.55□□□□□ -1.68
COPS3-216ENST00000579716 HILPDAQ9Y5L2 63 aa4.55□□□□□ -1.68
COPS3-216ENST00000579716 NOTCH4Q99466 2003 aa4.55□□□□□ -1.68
COPS3-216ENST00000579716 NUP188Q5SRE5 1749 aa4.55□□□□□ -1.68
COPS3-216ENST00000579716 CDC42BPGQ6DT37 1551 aa4.54□□□□□ -1.68
COPS3-216ENST00000579716 A6NIN4 97 aa4.54□□□□□ -1.68
COPS3-216ENST00000579716 IL4P05112 153 aa4.54□□□□□ -1.68
COPS3-216ENST00000579716 MSMBP08118 114 aa4.54□□□□□ -1.68
COPS3-216ENST00000579716 IL17AQ16552 155 aa4.54□□□□□ -1.68
COPS3-216ENST00000579716 MIAQ16674 131 aa4.54□□□□□ -1.68
COPS3-216ENST00000579716 FAM103A1Q9BTL3 118 aaKnown RBP4.54□□□□□ -1.68
COPS3-216ENST00000579716 CHCHD7Q9BUK0 85 aa4.54□□□□□ -1.68
COPS3-216ENST00000579716 CYP4F30PQ9H0H9 118 aa4.54□□□□□ -1.68
COPS3-216ENST00000579716 NDUFA12Q9UI09 145 aa4.54□□□□□ -1.68
COPS3-216ENST00000579716 SMAD5-AS1Q9Y6J3 95 aa4.54□□□□□ -1.68
COPS3-216ENST00000579716 ATP7AQ04656 1500 aa4.54□□□□□ -1.68
COPS3-216ENST00000579716 SCN9AQ15858 1988 aa4.54□□□□□ -1.68
COPS3-216ENST00000579716 IGHV3-49A0A0A0MS15 119 aa4.53□□□□□ -1.68
COPS3-216ENST00000579716 IGHV3-66A0A0C4DH42 116 aa4.53□□□□□ -1.68
COPS3-216ENST00000579716 hDV103S1A0JD37 113 aa4.53□□□□□ -1.68
COPS3-216ENST00000579716 C17orf51A8MQB3 221 aa4.53□□□□□ -1.68
COPS3-216ENST00000579716 H3BMM0 161 aa4.53□□□□□ -1.68
COPS3-216ENST00000579716 GNRH2O43555 120 aa4.53□□□□□ -1.68
COPS3-216ENST00000579716 CMC4P56277 68 aaPredicted RBP4.53□□□□□ -1.68
COPS3-216ENST00000579716 RNASE13Q5GAN3 156 aaKnown RBP4.53□□□□□ -1.68
COPS3-216ENST00000579716 UBE2WQ96B02 151 aa4.53□□□□□ -1.68
COPS3-216ENST00000579716 ZNF414Q96IQ9 312 aa4.53□□□□□ -1.68
COPS3-216ENST00000579716 GABARAPL1Q9H0R8 117 aa4.53□□□□□ -1.68
COPS3-216ENST00000579716 MRC1P22897 1456 aa4.53□□□□□ -1.68
COPS3-216ENST00000579716 COL18A1P39060 1754 aa4.53□□□□□ -1.69
COPS3-216ENST00000579716 AFDNP55196 1824 aaKnown RBP4.52□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 46.8 ms