RNA–Protein interactions for RNA: ENST00000579605.5

CDK5RAP3-213, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 4

Gene CDK5RAP3, Length 560 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-213ENST00000579605 Q8TAT8 98 aa8.67□□□□□ -1.02
CDK5RAP3-213ENST00000579605 SFTA3P0C7M3 94 aa8.66□□□□□ -1.02
CDK5RAP3-213ENST00000579605 FXYD5Q96DB9 178 aa8.66□□□□□ -1.02
CDK5RAP3-213ENST00000579605 PHYHIPLQ96FC7 376 aa8.66□□□□□ -1.02
CDK5RAP3-213ENST00000579605 TM2D2Q9BX73 214 aa8.66□□□□□ -1.02
CDK5RAP3-213ENST00000579605 RBAKDNA6NC62 111 aa8.65□□□□□ -1.02
CDK5RAP3-213ENST00000579605 C17orf112F2Z3M2 114 aa8.65□□□□□ -1.02
CDK5RAP3-213ENST00000579605 OR7C2O60412 319 aa8.65□□□□□ -1.02
CDK5RAP3-213ENST00000579605 RANP62826 216 aaKnown RBP8.65□□□□□ -1.02
CDK5RAP3-213ENST00000579605 ZNF266Q14584 549 aa8.65□□□□□ -1.02
CDK5RAP3-213ENST00000579605 LRRC37A5PQ49AS3 106 aa8.65□□□□□ -1.02
CDK5RAP3-213ENST00000579605 TXNDC17Q9BRA2 123 aa8.65□□□□□ -1.02
CDK5RAP3-213ENST00000579605 WDR61Q9GZS3 305 aaKnown RBP8.65□□□□□ -1.02
CDK5RAP3-213ENST00000579605 OR5AC2Q9NZP5 309 aa8.65□□□□□ -1.02
CDK5RAP3-213ENST00000579605 NDUFA13Q9P0J0 144 aa8.65□□□□□ -1.02
CDK5RAP3-213ENST00000579605 SIX6O95475 246 aa8.64□□□□□ -1.03
CDK5RAP3-213ENST00000579605 PPT1P50897 306 aa8.64□□□□□ -1.03
CDK5RAP3-213ENST00000579605 LINC01556Q5JQF7 62 aa8.64□□□□□ -1.03
CDK5RAP3-213ENST00000579605 FAM159AQ6UWV7 190 aa8.64□□□□□ -1.03
CDK5RAP3-213ENST00000579605 IQCF2Q8IXL9 164 aa8.64□□□□□ -1.03
CDK5RAP3-213ENST00000579605 BAALCQ8WXS3 180 aa8.64□□□□□ -1.03
CDK5RAP3-213ENST00000579605 ZNF479Q96JC4 524 aa8.64□□□□□ -1.03
CDK5RAP3-213ENST00000579605 SPXQ9BT56 116 aa8.64□□□□□ -1.03
CDK5RAP3-213ENST00000579605 TRGV11A0A075B6L2 103 aa8.63□□□□□ -1.03
CDK5RAP3-213ENST00000579605 LOC100131303A0A0U1RQF7 123 aa8.63□□□□□ -1.03
CDK5RAP3-213ENST00000579605 IGLV2-11P01706 119 aa8.63□□□□□ -1.03
CDK5RAP3-213ENST00000579605 ORM1P02763 201 aa8.63□□□□□ -1.03
CDK5RAP3-213ENST00000579605 UBE2L3P68036 154 aaKnown RBP8.63□□□□□ -1.03
CDK5RAP3-213ENST00000579605 ASAH1Q13510 395 aa8.63□□□□□ -1.03
CDK5RAP3-213ENST00000579605 ODF1Q14990 250 aa8.63□□□□□ -1.03
CDK5RAP3-213ENST00000579605 TMEM183BQ1AE95 376 aa8.63□□□□□ -1.03
CDK5RAP3-213ENST00000579605 OR10J3Q5JRS4 329 aa8.63□□□□□ -1.03
CDK5RAP3-213ENST00000579605 TMEM183AQ8IXX5 376 aa8.63□□□□□ -1.03
CDK5RAP3-213ENST00000579605 NHLRC2Q8NBF2 726 aa8.63□□□□□ -1.03
CDK5RAP3-213ENST00000579605 OR10G4Q8NGN3 311 aa8.63□□□□□ -1.03
CDK5RAP3-213ENST00000579605 NMES1Q9C002 83 aa8.63□□□□□ -1.03
CDK5RAP3-213ENST00000579605 NAGKQ9UJ70 344 aa8.63□□□□□ -1.03
CDK5RAP3-213ENST00000579605 TRAV8-6A0A0B4J262 113 aa8.62□□□□□ -1.03
CDK5RAP3-213ENST00000579605 KRTAP9-6A0A140TA67 174 aa8.62□□□□□ -1.03
CDK5RAP3-213ENST00000579605 DIRC3C9JPN6 131 aa8.62□□□□□ -1.03
CDK5RAP3-213ENST00000579605 TAS2R45P59539 299 aa8.62□□□□□ -1.03
CDK5RAP3-213ENST00000579605 FFAR4Q5NUL3 377 aa8.62□□□□□ -1.03
CDK5RAP3-213ENST00000579605 Q6AWC8 147 aa8.62□□□□□ -1.03
CDK5RAP3-213ENST00000579605 ENKURQ8TC29 256 aa8.62□□□□□ -1.03
CDK5RAP3-213ENST00000579605 RASL10AQ92737 203 aa8.62□□□□□ -1.03
CDK5RAP3-213ENST00000579605 LENEPQ9Y5L5 61 aa8.62□□□□□ -1.03
CDK5RAP3-213ENST00000579605 TRAV4A0A0B4J268 109 aa8.61□□□□□ -1.03
CDK5RAP3-213ENST00000579605 C9JCJ5 164 aa8.61□□□□□ -1.03
CDK5RAP3-213ENST00000579605 H0YIZ8 118 aa8.61□□□□□ -1.03
CDK5RAP3-213ENST00000579605 CYCSP99999 105 aaKnown RBP8.61□□□□□ -1.03
CDK5RAP3-213ENST00000579605 TDRG1Q3Y452 100 aa8.61□□□□□ -1.03
CDK5RAP3-213ENST00000579605 KHDC3LQ587J8 217 aa8.61□□□□□ -1.03
CDK5RAP3-213ENST00000579605 OR4C5Q8NGB2 326 aa8.61□□□□□ -1.03
CDK5RAP3-213ENST00000579605 CMTM2Q8TAZ6 248 aa8.61□□□□□ -1.03
CDK5RAP3-213ENST00000579605 SCGB1C1Q8TD33 95 aa8.61□□□□□ -1.03
CDK5RAP3-213ENST00000579605 HYLS1Q96M11 299 aa8.61□□□□□ -1.03
CDK5RAP3-213ENST00000579605 ATP5SQ99766 215 aa8.61□□□□□ -1.03
CDK5RAP3-213ENST00000579605 S100ZQ8WXG8 99 aa8.6□□□□□ -1.03
CDK5RAP3-213ENST00000579605 OTORQ9NRC9 128 aa8.6□□□□□ -1.03
CDK5RAP3-213ENST00000579605 RPH3ALQ9UNE2 315 aa8.6□□□□□ -1.03
CDK5RAP3-213ENST00000579605 PGPA6NDG6 321 aa8.59□□□□□ -1.03
CDK5RAP3-213ENST00000579605 M0R2P5 195 aa8.59□□□□□ -1.03
CDK5RAP3-213ENST00000579605 FAM74A1Q5RGS3 127 aa8.59□□□□□ -1.03
CDK5RAP3-213ENST00000579605 Q6ZRU5 148 aa8.59□□□□□ -1.03
CDK5RAP3-213ENST00000579605 SH2D6Q7Z4S9 175 aa8.59□□□□□ -1.03
CDK5RAP3-213ENST00000579605 TMED6Q8WW62 240 aa8.59□□□□□ -1.03
CDK5RAP3-213ENST00000579605 HSPB11Q9Y547 144 aa8.59□□□□□ -1.03
CDK5RAP3-213ENST00000579605 TRAV21A0A0B4J279 112 aa8.58□□□□□ -1.04
CDK5RAP3-213ENST00000579605 GNRH2O43555 120 aa8.58□□□□□ -1.04
CDK5RAP3-213ENST00000579605 EIF3GO75821 320 aaKnown RBP eCLIP8.58□□□□□ -1.04
CDK5RAP3-213ENST00000579605 LINC00299Q6ZSB3 139 aa8.58□□□□□ -1.04
CDK5RAP3-213ENST00000579605 PPP1R1CQ8WVI7 109 aa8.58□□□□□ -1.04
CDK5RAP3-213ENST00000579605 SMIM3Q9BZL3 60 aa8.58□□□□□ -1.04
CDK5RAP3-213ENST00000579605 MBD2Q9UBB5 411 aa8.58□□□□□ -1.04
CDK5RAP3-213ENST00000579605 IGHV3-16A0A0C4DH30 117 aa8.57□□□□□ -1.04
CDK5RAP3-213ENST00000579605 F6UZH7 168 aa8.57□□□□□ -1.04
CDK5RAP3-213ENST00000579605 INMT-MINDY4F8WBC2 141 aa8.57□□□□□ -1.04
CDK5RAP3-213ENST00000579605 PET100P0DJ07 73 aa8.57□□□□□ -1.04
CDK5RAP3-213ENST00000579605 GOLT1AQ6ZVE7 132 aa8.57□□□□□ -1.04
CDK5RAP3-213ENST00000579605 Q8N3U1 123 aa8.57□□□□□ -1.04
CDK5RAP3-213ENST00000579605 DPH3P1Q9H4G8 78 aa8.57□□□□□ -1.04
CDK5RAP3-213ENST00000579605 SDF2L1Q9HCN8 221 aa8.57□□□□□ -1.04
CDK5RAP3-213ENST00000579605 A0A1W2PPV4 95 aa8.56□□□□□ -1.04
CDK5RAP3-213ENST00000579605 UPK1BO75841 260 aa8.56□□□□□ -1.04
CDK5RAP3-213ENST00000579605 MPC2O95563 127 aa8.56□□□□□ -1.04
CDK5RAP3-213ENST00000579605 TYMSP04818 313 aa8.56□□□□□ -1.04
CDK5RAP3-213ENST00000579605 RPL12P30050 165 aaKnown RBP8.56□□□□□ -1.04
CDK5RAP3-213ENST00000579605 H2BFSP57053 126 aa8.56□□□□□ -1.04
CDK5RAP3-213ENST00000579605 TIRAPP58753 221 aa8.56□□□□□ -1.04
CDK5RAP3-213ENST00000579605 LAGE3Q14657 143 aa8.56□□□□□ -1.04
CDK5RAP3-213ENST00000579605 Q8N976 141 aa8.56□□□□□ -1.04
CDK5RAP3-213ENST00000579605 KCNS1Q96KK3 526 aa8.56□□□□□ -1.04
CDK5RAP3-213ENST00000579605 TREM1Q9NP99 234 aa8.56□□□□□ -1.04
CDK5RAP3-213ENST00000579605 TRAV8-3A0A0A6YYJ7 113 aa8.55□□□□□ -1.04
CDK5RAP3-213ENST00000579605 RNF222A6NCQ9 220 aa8.55□□□□□ -1.04
CDK5RAP3-213ENST00000579605 SSNA1O43805 119 aa8.55□□□□□ -1.04
CDK5RAP3-213ENST00000579605 PFN1P07737 140 aaKnown RBP8.55□□□□□ -1.04
CDK5RAP3-213ENST00000579605 GATA1P15976 413 aaPredicted RBP8.55□□□□□ -1.04
CDK5RAP3-213ENST00000579605 PQLC2Q6ZP29 291 aa8.55□□□□□ -1.04
CDK5RAP3-213ENST00000579605 ARL6IP6Q8N6S5 226 aa8.55□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 42 ms