RNA–Protein interactions for RNA: ENST00000578995.5

SMARCE1-215, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1, humanhuman

TSL 2

Gene SMARCE1, Length 534 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1-215ENST00000578995 TMEM183BQ1AE95 376 aa2.69□□□□□ -1.98
SMARCE1-215ENST00000578995 TDRG1Q3Y452 100 aa2.69□□□□□ -1.98
SMARCE1-215ENST00000578995 ZNF506Q5JVG8 444 aa2.69□□□□□ -1.98
SMARCE1-215ENST00000578995 EIF5AL1Q6IS14 154 aaKnown RBP2.69□□□□□ -1.98
SMARCE1-215ENST00000578995 OR10J6PQ8NGY7 276 aa2.69□□□□□ -1.98
SMARCE1-215ENST00000578995 OR11H2Q8NH07 326 aa2.69□□□□□ -1.98
SMARCE1-215ENST00000578995 LRRC20Q8TCA0 184 aa2.69□□□□□ -1.98
SMARCE1-215ENST00000578995 PCNPQ8WW12 178 aaKnown RBP2.69□□□□□ -1.98
SMARCE1-215ENST00000578995 HIST1H2BAQ96A08 127 aa2.69□□□□□ -1.98
SMARCE1-215ENST00000578995 ZC2HC1AQ96GY0 325 aa2.69□□□□□ -1.98
SMARCE1-215ENST00000578995 SGK494Q96LW2 274 aa2.69□□□□□ -1.98
SMARCE1-215ENST00000578995 TCEAL7Q9BRU2 100 aa2.69□□□□□ -1.98
SMARCE1-215ENST00000578995 C1QTNF4Q9BXJ3 329 aa2.69□□□□□ -1.98
SMARCE1-215ENST00000578995 MANBALQ9NQG1 85 aa2.69□□□□□ -1.98
SMARCE1-215ENST00000578995 TP53TG3Q9ULZ0 132 aa2.69□□□□□ -1.98
SMARCE1-215ENST00000578995 PSG8Q9UQ74 426 aa2.69□□□□□ -1.98
SMARCE1-215ENST00000578995 DNAH10Q8IVF4 4471 aa2.69□□□□□ -1.98
SMARCE1-215ENST00000578995 DNAH17Q9UFH2 4485 aa2.69□□□□□ -1.98
SMARCE1-215ENST00000578995 TRAV12-3A0A0B4J271 114 aa2.68□□□□□ -1.98
SMARCE1-215ENST00000578995 IGKV3D-20A0A0C4DH25 116 aa2.68□□□□□ -1.98
SMARCE1-215ENST00000578995 SMIM9A6NGZ8 99 aa2.68□□□□□ -1.98
SMARCE1-215ENST00000578995 FBLL1A6NHQ2 334 aaKnown RBP2.68□□□□□ -1.98
SMARCE1-215ENST00000578995 ZNF705GA8MUZ8 300 aaPredicted RBP2.68□□□□□ -1.98
SMARCE1-215ENST00000578995 C11orf94C9JXX5 98 aa2.68□□□□□ -1.98
SMARCE1-215ENST00000578995 F6UZH7 168 aa2.68□□□□□ -1.98
SMARCE1-215ENST00000578995 DEFB4AO15263 64 aa2.68□□□□□ -1.98
SMARCE1-215ENST00000578995 INSP01308 110 aa2.68□□□□□ -1.98
SMARCE1-215ENST00000578995 HBE1P02100 147 aa2.68□□□□□ -1.98
SMARCE1-215ENST00000578995 LEPP41159 167 aa2.68□□□□□ -1.98
SMARCE1-215ENST00000578995 TAS2R60P59551 318 aa2.68□□□□□ -1.98
SMARCE1-215ENST00000578995 MEF2BQ02080 365 aaPredicted RBP2.68□□□□□ -1.98
SMARCE1-215ENST00000578995 ANXA2RQ3ZCQ2 193 aa2.68□□□□□ -1.98
SMARCE1-215ENST00000578995 DNLZQ5SXM8 178 aa2.68□□□□□ -1.98
SMARCE1-215ENST00000578995 TMEM78Q5T7P6 136 aa2.68□□□□□ -1.98
SMARCE1-215ENST00000578995 TMEM256Q8N2U0 113 aa2.68□□□□□ -1.98
SMARCE1-215ENST00000578995 FAM210AQ96ND0 272 aa2.68□□□□□ -1.98
SMARCE1-215ENST00000578995 RARRES2Q99969 163 aa2.68□□□□□ -1.98
SMARCE1-215ENST00000578995 NKX6-2Q9C056 277 aaPredicted RBP2.68□□□□□ -1.98
SMARCE1-215ENST00000578995 ZMAT4Q9H898 229 aa2.68□□□□□ -1.98
SMARCE1-215ENST00000578995 GNG13Q9P2W3 67 aa2.68□□□□□ -1.98
SMARCE1-215ENST00000578995 DKK2Q9UBU2 259 aa2.68□□□□□ -1.98
SMARCE1-215ENST00000578995 VAX2Q9UIW0 290 aa2.68□□□□□ -1.98
SMARCE1-215ENST00000578995 RPH3ALQ9UNE2 315 aa2.68□□□□□ -1.98
SMARCE1-215ENST00000578995 FAT2Q9NYQ8 4349 aa2.68□□□□□ -1.98
SMARCE1-215ENST00000578995 IGHV3-16A0A0C4DH30 117 aa2.67□□□□□ -1.98
SMARCE1-215ENST00000578995 RAB19A4D1S5 217 aa2.67□□□□□ -1.98
SMARCE1-215ENST00000578995 C19orf71A6NCJ1 209 aa2.67□□□□□ -1.98
SMARCE1-215ENST00000578995 RBFOX3A6NFN3 312 aa2.67□□□□□ -1.98
SMARCE1-215ENST00000578995 PGPEP1LA6NFU8 196 aa2.67□□□□□ -1.98
SMARCE1-215ENST00000578995 C9JCJ5 164 aa2.67□□□□□ -1.98
SMARCE1-215ENST00000578995 TMEM250H0YL14 139 aa2.67□□□□□ -1.98
SMARCE1-215ENST00000578995 TEX46H3BTG2 121 aa2.67□□□□□ -1.98
SMARCE1-215ENST00000578995 H7BYZ3 331 aa2.67□□□□□ -1.98
SMARCE1-215ENST00000578995 J3KRW8 73 aa2.67□□□□□ -1.98
SMARCE1-215ENST00000578995 K7EN84 100 aa2.67□□□□□ -1.98
SMARCE1-215ENST00000578995 TYMSP04818 313 aa2.67□□□□□ -1.98
SMARCE1-215ENST00000578995 SRP19P09132 144 aaKnown RBP2.67□□□□□ -1.98
SMARCE1-215ENST00000578995 RNASE3P12724 160 aaKnown RBP2.67□□□□□ -1.98
SMARCE1-215ENST00000578995 RPL35P42766 123 aaKnown RBP2.67□□□□□ -1.98
SMARCE1-215ENST00000578995 CSN1S1P47710 185 aa2.67□□□□□ -1.98
SMARCE1-215ENST00000578995 PPT1P50897 306 aa2.67□□□□□ -1.98
SMARCE1-215ENST00000578995 TCL1AP56279 114 aa2.67□□□□□ -1.98
SMARCE1-215ENST00000578995 NUTF2P61970 127 aaKnown RBP2.67□□□□□ -1.98
SMARCE1-215ENST00000578995 BLOC1S1P78537 153 aa2.67□□□□□ -1.98
SMARCE1-215ENST00000578995 ZNF674Q2M3X9 581 aa2.67□□□□□ -1.98
SMARCE1-215ENST00000578995 C12orf74Q32Q52 190 aa2.67□□□□□ -1.98
SMARCE1-215ENST00000578995 TOR2AQ5JU69 321 aa2.67□□□□□ -1.98
SMARCE1-215ENST00000578995 CLLU1Q5K131 121 aa2.67□□□□□ -1.98
SMARCE1-215ENST00000578995 IBA57Q5T440 356 aaKnown RBP2.67□□□□□ -1.98
SMARCE1-215ENST00000578995 CST9LP1Q5W188 147 aa2.67□□□□□ -1.98
SMARCE1-215ENST00000578995 PRNTQ86SH4 94 aa2.67□□□□□ -1.98
SMARCE1-215ENST00000578995 IQCF2Q8IXL9 164 aa2.67□□□□□ -1.98
SMARCE1-215ENST00000578995 TMEM183AQ8IXX5 376 aa2.67□□□□□ -1.98
SMARCE1-215ENST00000578995 POM121L12Q8N7R1 296 aa2.67□□□□□ -1.98
SMARCE1-215ENST00000578995 CMTM2Q8TAZ6 248 aa2.67□□□□□ -1.98
SMARCE1-215ENST00000578995 TMEM263Q8WUH6 116 aaKnown RBP2.67□□□□□ -1.98
SMARCE1-215ENST00000578995 FMC1Q96HJ9 113 aa2.67□□□□□ -1.98
SMARCE1-215ENST00000578995 C9orf85Q96MD7 179 aa2.67□□□□□ -1.98
SMARCE1-215ENST00000578995 C18orf15Q96N68 181 aa2.67□□□□□ -1.98
SMARCE1-215ENST00000578995 TXNDC17Q9BRA2 123 aa2.67□□□□□ -1.98
SMARCE1-215ENST00000578995 PYGO2Q9BRQ0 406 aa2.67□□□□□ -1.98
SMARCE1-215ENST00000578995 TREM1Q9NP99 234 aa2.67□□□□□ -1.98
SMARCE1-215ENST00000578995 MDFICQ9P1T7 246 aa2.67□□□□□ -1.98
SMARCE1-215ENST00000578995 GOLT1BQ9Y3E0 138 aa2.67□□□□□ -1.98
SMARCE1-215ENST00000578995 FRAS1Q86XX4 4008 aa2.66□□□□□ -1.98
SMARCE1-215ENST00000578995 KMT2AQ03164 3969 aa2.66□□□□□ -1.98
SMARCE1-215ENST00000578995 IGHV3OR16-12A0A075B7B8 117 aa2.66□□□□□ -1.98
SMARCE1-215ENST00000578995 IGHV1OR15-1A0A075B7D0 117 aa2.66□□□□□ -1.98
SMARCE1-215ENST00000578995 KRBOX1C9JBD0 128 aa2.66□□□□□ -1.98
SMARCE1-215ENST00000578995 GNRH2O43555 120 aa2.66□□□□□ -1.98
SMARCE1-215ENST00000578995 PDE6DO43924 150 aa2.66□□□□□ -1.98
SMARCE1-215ENST00000578995 SPINK4O60575 86 aa2.66□□□□□ -1.98
SMARCE1-215ENST00000578995 SH2D1AO60880 128 aa2.66□□□□□ -1.98
SMARCE1-215ENST00000578995 NXPH4O95158 308 aa2.66□□□□□ -1.98
SMARCE1-215ENST00000578995 GCGP01275 180 aa2.66□□□□□ -1.98
SMARCE1-215ENST00000578995 IFNA7P01567 189 aa2.66□□□□□ -1.98
SMARCE1-215ENST00000578995 GPX1P07203 203 aa2.66□□□□□ -1.98
SMARCE1-215ENST00000578995 PFN1P07737 140 aaKnown RBP2.66□□□□□ -1.98
SMARCE1-215ENST00000578995 ADCYAP1P18509 176 aa2.66□□□□□ -1.98
SMARCE1-215ENST00000578995 RNASE4P34096 147 aaKnown RBP2.66□□□□□ -1.98
Retrieved 100 of 20,778 RNA–protein pairs in 42.2 ms