RNA–Protein interactions for RNA: ENST00000578917.1

TRAF4-213, Transcript of TNF receptor associated factor 4, humanhuman

TSL 4

Gene TRAF4, Length 484 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4-213ENST00000578917 FAM74A7A6NL05 159 aa4.6□□□□□ -1.67
TRAF4-213ENST00000578917 FABP5P3A8MUU1 101 aa4.6□□□□□ -1.67
TRAF4-213ENST00000578917 C9JCJ5 164 aa4.6□□□□□ -1.67
TRAF4-213ENST00000578917 PEX7O00628 323 aa4.6□□□□□ -1.67
TRAF4-213ENST00000578917 PAX4O43316 350 aa4.6□□□□□ -1.67
TRAF4-213ENST00000578917 PAGE4O60829 102 aa4.6□□□□□ -1.67
TRAF4-213ENST00000578917 ORM1P02763 201 aa4.6□□□□□ -1.67
TRAF4-213ENST00000578917 PFN1P07737 140 aaKnown RBP4.6□□□□□ -1.67
TRAF4-213ENST00000578917 HOXA5P20719 270 aa4.6□□□□□ -1.67
TRAF4-213ENST00000578917 S100A4P26447 101 aaKnown RBP4.6□□□□□ -1.67
TRAF4-213ENST00000578917 FAM3BP58499 235 aaPredicted RBP4.6□□□□□ -1.67
TRAF4-213ENST00000578917 SLAQ13239 276 aa4.6□□□□□ -1.67
TRAF4-213ENST00000578917 LGALSLQ3ZCW2 172 aaPredicted RBP4.6□□□□□ -1.67
TRAF4-213ENST00000578917 Q6ZNX1 250 aa4.6□□□□□ -1.67
TRAF4-213ENST00000578917 LINC00612Q8N6U2 182 aa4.6□□□□□ -1.67
TRAF4-213ENST00000578917 TMEM75Q8N9X5 138 aa4.6□□□□□ -1.67
TRAF4-213ENST00000578917 OR4C5Q8NGB2 326 aa4.6□□□□□ -1.67
TRAF4-213ENST00000578917 TVP23CQ96ET8 276 aa4.6□□□□□ -1.67
TRAF4-213ENST00000578917 C8orf49Q96NF6 230 aa4.6□□□□□ -1.67
TRAF4-213ENST00000578917 HHLA3Q9XRX5 114 aa4.6□□□□□ -1.67
TRAF4-213ENST00000578917 M0R2P5 195 aa4.59□□□□□ -1.67
TRAF4-213ENST00000578917 AKR1C3P42330 323 aa4.59□□□□□ -1.67
TRAF4-213ENST00000578917 RAB5CP51148 216 aa4.59□□□□□ -1.67
TRAF4-213ENST00000578917 TDRG1Q3Y452 100 aa4.59□□□□□ -1.67
TRAF4-213ENST00000578917 ZNF876PQ49A33 203 aa4.59□□□□□ -1.67
TRAF4-213ENST00000578917 SOHLH1Q5JUK2 328 aa4.59□□□□□ -1.67
TRAF4-213ENST00000578917 TCTE3Q8IZS6 198 aa4.59□□□□□ -1.67
TRAF4-213ENST00000578917 PCNPQ8WW12 178 aaKnown RBP4.59□□□□□ -1.67
TRAF4-213ENST00000578917 MBD3L1Q8WWY6 194 aa4.59□□□□□ -1.67
TRAF4-213ENST00000578917 FMC1Q96HJ9 113 aa4.59□□□□□ -1.67
TRAF4-213ENST00000578917 TCEAL7Q9BRU2 100 aa4.59□□□□□ -1.67
TRAF4-213ENST00000578917 PRO0255Q9UI72 69 aa4.59□□□□□ -1.67
TRAF4-213ENST00000578917 ZFP30Q9Y2G7 519 aa4.59□□□□□ -1.67
TRAF4-213ENST00000578917 BOLA1Q9Y3E2 137 aa4.59□□□□□ -1.67
TRAF4-213ENST00000578917 ARL2-SNX15V9GYD0 113 aa4.59□□□□□ -1.67
TRAF4-213ENST00000578917 IGHV3-16A0A0C4DH30 117 aa4.58□□□□□ -1.68
TRAF4-213ENST00000578917 H3BNG1 76 aa4.58□□□□□ -1.68
TRAF4-213ENST00000578917 IGLV2-11P01706 119 aa4.58□□□□□ -1.68
TRAF4-213ENST00000578917 C1QBP02746 253 aa4.58□□□□□ -1.68
TRAF4-213ENST00000578917 TYMSP04818 313 aa4.58□□□□□ -1.68
TRAF4-213ENST00000578917 S100A9P06702 114 aaKnown RBP4.58□□□□□ -1.68
TRAF4-213ENST00000578917 SFTA3P0C7M3 94 aa4.58□□□□□ -1.68
TRAF4-213ENST00000578917 ASIPP42127 132 aa4.58□□□□□ -1.68
TRAF4-213ENST00000578917 ZNF80P51504 273 aaPredicted RBP4.58□□□□□ -1.68
TRAF4-213ENST00000578917 FAM162BQ5T6X4 162 aa4.58□□□□□ -1.68
TRAF4-213ENST00000578917 SLC51BQ86UW2 128 aa4.58□□□□□ -1.68
TRAF4-213ENST00000578917 RASL10AQ92737 203 aa4.58□□□□□ -1.68
TRAF4-213ENST00000578917 C18orf15Q96N68 181 aa4.58□□□□□ -1.68
TRAF4-213ENST00000578917 GNG13Q9P2W3 67 aa4.58□□□□□ -1.68
TRAF4-213ENST00000578917 ICOSQ9Y6W8 199 aa4.58□□□□□ -1.68
TRAF4-213ENST00000578917 TMSB15BA0A087X1C1 80 aa4.57□□□□□ -1.68
TRAF4-213ENST00000578917 A0A096LPF7 62 aa4.57□□□□□ -1.68
TRAF4-213ENST00000578917 B4DEV8 164 aa4.57□□□□□ -1.68
TRAF4-213ENST00000578917 M0R036 132 aa4.57□□□□□ -1.68
TRAF4-213ENST00000578917 IFNA1P01562 189 aa4.57□□□□□ -1.68
TRAF4-213ENST00000578917 FHL2Q14192 279 aa4.57□□□□□ -1.68
TRAF4-213ENST00000578917 MRPL23Q16540 153 aaKnown RBP4.57□□□□□ -1.68
TRAF4-213ENST00000578917 ESRGQ1W209 222 aa4.57□□□□□ -1.68
TRAF4-213ENST00000578917 C1orf134Q5TEV5 83 aa4.57□□□□□ -1.68
TRAF4-213ENST00000578917 Q86TA4 180 aa4.57□□□□□ -1.68
TRAF4-213ENST00000578917 BAGE2Q86Y30 109 aa4.57□□□□□ -1.68
TRAF4-213ENST00000578917 NHLRC2Q8NBF2 726 aa4.57□□□□□ -1.68
TRAF4-213ENST00000578917 VSIG2Q96IQ7 327 aa4.57□□□□□ -1.68
TRAF4-213ENST00000578917 ZNF479Q96JC4 524 aa4.57□□□□□ -1.68
TRAF4-213ENST00000578917 Q9H8V8 135 aa4.57□□□□□ -1.68
TRAF4-213ENST00000578917 C11orf21Q9P2W6 132 aa4.57□□□□□ -1.68
TRAF4-213ENST00000578917 LINC00588Q9Y4M8 146 aa4.57□□□□□ -1.68
TRAF4-213ENST00000578917 PLECQ15149 4684 aaKnown RBP4.57□□□□□ -1.68
TRAF4-213ENST00000578917 SACSQ9NZJ4 4579 aa4.56□□□□□ -1.68
TRAF4-213ENST00000578917 IGHV3-73A0A0B4J1V6 119 aa4.56□□□□□ -1.68
TRAF4-213ENST00000578917 TRAV4A0A0B4J268 109 aa4.56□□□□□ -1.68
TRAF4-213ENST00000578917 GRIFINA4D1Z8 144 aa4.56□□□□□ -1.68
TRAF4-213ENST00000578917 SH2D1AO60880 128 aa4.56□□□□□ -1.68
TRAF4-213ENST00000578917 GYPEP15421 78 aa4.56□□□□□ -1.68
TRAF4-213ENST00000578917 SRIP30626 198 aa4.56□□□□□ -1.68
TRAF4-213ENST00000578917 CRYBA4P53673 196 aa4.56□□□□□ -1.68
TRAF4-213ENST00000578917 CCL20P78556 96 aa4.56□□□□□ -1.68
TRAF4-213ENST00000578917 NEGR1Q7Z3B1 354 aa4.56□□□□□ -1.68
TRAF4-213ENST00000578917 SYT8Q8NBV8 401 aa4.56□□□□□ -1.68
TRAF4-213ENST00000578917 ZC2HC1AQ96GY0 325 aa4.56□□□□□ -1.68
TRAF4-213ENST00000578917 TXNDC17Q9BRA2 123 aa4.56□□□□□ -1.68
TRAF4-213ENST00000578917 PRADC1Q9BSG0 188 aa4.56□□□□□ -1.68
TRAF4-213ENST00000578917 MANBALQ9NQG1 85 aa4.56□□□□□ -1.68
TRAF4-213ENST00000578917 PHLDA3Q9Y5J5 127 aa4.56□□□□□ -1.68
TRAF4-213ENST00000578917 TRAV9-2A0A087WT02 112 aa4.55□□□□□ -1.68
TRAF4-213ENST00000578917 TRAV1-1A0A0B4J248 108 aa4.55□□□□□ -1.68
TRAF4-213ENST00000578917 NBDYA0A0U1RRE5 68 aa4.55□□□□□ -1.68
TRAF4-213ENST00000578917 SCO2A0A1W2PP80 73 aa4.55□□□□□ -1.68
TRAF4-213ENST00000578917 LTAP01374 205 aa4.55□□□□□ -1.68
TRAF4-213ENST00000578917 ARMS2P0C7Q2 107 aa4.55□□□□□ -1.68
TRAF4-213ENST00000578917 SULT1A2P50226 295 aa4.55□□□□□ -1.68
TRAF4-213ENST00000578917 PRR27Q6MZM9 219 aa4.55□□□□□ -1.68
TRAF4-213ENST00000578917 LINC00336Q6ZUF6 198 aa4.55□□□□□ -1.68
TRAF4-213ENST00000578917 ZNRF2Q8NHG8 242 aa4.55□□□□□ -1.68
TRAF4-213ENST00000578917 DAZAP1Q96EP5 407 aaKnown RBP4.55□□□□□ -1.68
TRAF4-213ENST00000578917 MED9Q9NWA0 146 aa4.55□□□□□ -1.68
TRAF4-213ENST00000578917 ALMS1Q8TCU4 4167 aa4.55□□□□□ -1.68
TRAF4-213ENST00000578917 DNAH1Q9P2D7 4330 aa4.54□□□□□ -1.68
TRAF4-213ENST00000578917 IGKV3D-20A0A0C4DH25 116 aa4.54□□□□□ -1.68
TRAF4-213ENST00000578917 TRBV6-1A0A0K0K1D8 114 aa4.54□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms