RNA–Protein interactions for RNA: ENST00000578733.5

CDK5RAP3-210, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 2

Gene CDK5RAP3, Length 578 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-210ENST00000578733 MUC21Q5SSG8 566 aa8.16□□□□□ -1.1
CDK5RAP3-210ENST00000578733 WWC2-AS2Q96NR7 200 aa8.16□□□□□ -1.1
CDK5RAP3-210ENST00000578733 C11orf68Q9H3H3 251 aaKnown RBP8.16□□□□□ -1.1
CDK5RAP3-210ENST00000578733 U3KQK5 164 aa8.16□□□□□ -1.1
CDK5RAP3-210ENST00000578733 TRBV20OR9-2A0A075B6H5 130 aa8.15□□□□□ -1.1
CDK5RAP3-210ENST00000578733 IGHV4-28A0A0C4DH34 117 aa8.15□□□□□ -1.1
CDK5RAP3-210ENST00000578733 XKRY2A2RUG3 117 aa8.15□□□□□ -1.1
CDK5RAP3-210ENST00000578733 ZNF705GA8MUZ8 300 aaPredicted RBP8.15□□□□□ -1.1
CDK5RAP3-210ENST00000578733 B4DEV8 164 aa8.15□□□□□ -1.1
CDK5RAP3-210ENST00000578733 P01737 135 aa8.15□□□□□ -1.1
CDK5RAP3-210ENST00000578733 S100A4P26447 101 aaKnown RBP8.15□□□□□ -1.1
CDK5RAP3-210ENST00000578733 RPS20P60866 119 aaKnown RBP8.15□□□□□ -1.1
CDK5RAP3-210ENST00000578733 NDUFA5Q16718 116 aa8.15□□□□□ -1.1
CDK5RAP3-210ENST00000578733 IBA57Q5T440 356 aaKnown RBP8.15□□□□□ -1.1
CDK5RAP3-210ENST00000578733 OCC1Q8TAD7 63 aa8.15□□□□□ -1.1
CDK5RAP3-210ENST00000578733 PGPEP1LA6NFU8 196 aa8.14□□□□□ -1.11
CDK5RAP3-210ENST00000578733 F8W036 122 aa8.14□□□□□ -1.11
CDK5RAP3-210ENST00000578733 IGLV2-8P01709 118 aa8.14□□□□□ -1.11
CDK5RAP3-210ENST00000578733 ERVFC1-1P60608 527 aa8.14□□□□□ -1.11
CDK5RAP3-210ENST00000578733 PNRC1Q12796 327 aaPredicted RBP8.14□□□□□ -1.11
CDK5RAP3-210ENST00000578733 ADIRFQ15847 76 aa8.14□□□□□ -1.11
CDK5RAP3-210ENST00000578733 LINC01559Q495D7 138 aa8.14□□□□□ -1.11
CDK5RAP3-210ENST00000578733 LINC01551Q86U37 167 aa8.14□□□□□ -1.11
CDK5RAP3-210ENST00000578733 C15orf54Q8N8G6 183 aa8.14□□□□□ -1.11
CDK5RAP3-210ENST00000578733 Q8NAQ8 132 aa8.14□□□□□ -1.11
CDK5RAP3-210ENST00000578733 TMEM218A2RU14 115 aa8.13□□□□□ -1.11
CDK5RAP3-210ENST00000578733 M0R036 132 aa8.13□□□□□ -1.11
CDK5RAP3-210ENST00000578733 TYMSP04818 313 aa8.13□□□□□ -1.11
CDK5RAP3-210ENST00000578733 ASIPP42127 132 aa8.13□□□□□ -1.11
CDK5RAP3-210ENST00000578733 CRIP1P50238 77 aa8.13□□□□□ -1.11
CDK5RAP3-210ENST00000578733 EMP1P54849 157 aa8.13□□□□□ -1.11
CDK5RAP3-210ENST00000578733 FAM231DQ6ZW35 169 aa8.13□□□□□ -1.11
CDK5RAP3-210ENST00000578733 RNASE8Q8TDE3 154 aaKnown RBP8.13□□□□□ -1.11
CDK5RAP3-210ENST00000578733 SPXQ9BT56 116 aa8.13□□□□□ -1.11
CDK5RAP3-210ENST00000578733 SEC11CQ9BY50 192 aa8.13□□□□□ -1.11
CDK5RAP3-210ENST00000578733 TIMM8BQ9Y5J9 83 aaPredicted RBP8.13□□□□□ -1.11
CDK5RAP3-210ENST00000578733 C19orf71A6NCJ1 209 aa8.12□□□□□ -1.11
CDK5RAP3-210ENST00000578733 LYRM9A8MSI8 78 aa8.12□□□□□ -1.11
CDK5RAP3-210ENST00000578733 KRBOX1C9JBD0 128 aa8.12□□□□□ -1.11
CDK5RAP3-210ENST00000578733 GATCO43716 136 aaKnown RBP8.12□□□□□ -1.11
CDK5RAP3-210ENST00000578733 CXCL1P09341 107 aa8.12□□□□□ -1.11
CDK5RAP3-210ENST00000578733 RPL23P62829 140 aaKnown RBP8.12□□□□□ -1.11
CDK5RAP3-210ENST00000578733 C10orf91Q5T1B1 145 aa8.12□□□□□ -1.11
CDK5RAP3-210ENST00000578733 OR2D3Q8NGH3 330 aa8.12□□□□□ -1.11
CDK5RAP3-210ENST00000578733 RPP21Q9H633 154 aaKnown RBP8.12□□□□□ -1.11
CDK5RAP3-210ENST00000578733 TMSB15BA0A087X1C1 80 aa8.11□□□□□ -1.11
CDK5RAP3-210ENST00000578733 IGKV3D-20A0A0C4DH25 116 aa8.11□□□□□ -1.11
CDK5RAP3-210ENST00000578733 A0A0J9YWU9 116 aa8.11□□□□□ -1.11
CDK5RAP3-210ENST00000578733 CXorf65A6NEN9 183 aa8.11□□□□□ -1.11
CDK5RAP3-210ENST00000578733 K7EN84 100 aa8.11□□□□□ -1.11
CDK5RAP3-210ENST00000578733 SPART-AS1P0CW21 52 aa8.11□□□□□ -1.11
CDK5RAP3-210ENST00000578733 AZU1P20160 251 aa8.11□□□□□ -1.11
CDK5RAP3-210ENST00000578733 TCL1AP56279 114 aa8.11□□□□□ -1.11
CDK5RAP3-210ENST00000578733 Q6ZQT7 251 aa8.11□□□□□ -1.11
CDK5RAP3-210ENST00000578733 NUDT10Q8NFP7 164 aa8.11□□□□□ -1.11
CDK5RAP3-210ENST00000578733 IL17DQ8TAD2 202 aa8.11□□□□□ -1.11
CDK5RAP3-210ENST00000578733 ISOC2Q96AB3 205 aa8.11□□□□□ -1.11
CDK5RAP3-210ENST00000578733 NUDT11Q96G61 164 aa8.11□□□□□ -1.11
CDK5RAP3-210ENST00000578733 OSTCQ9NRP0 149 aa8.11□□□□□ -1.11
CDK5RAP3-210ENST00000578733 C11orf21Q9P2W6 132 aa8.11□□□□□ -1.11
CDK5RAP3-210ENST00000578733 TP53TG3Q9ULZ0 132 aa8.11□□□□□ -1.11
CDK5RAP3-210ENST00000578733 IGHV3-16A0A0C4DH30 117 aa8.1□□□□□ -1.11
CDK5RAP3-210ENST00000578733 PPP1R2P9O14990 202 aa8.1□□□□□ -1.11
CDK5RAP3-210ENST00000578733 DEFB4AO15263 64 aa8.1□□□□□ -1.11
CDK5RAP3-210ENST00000578733 GNRH2O43555 120 aa8.1□□□□□ -1.11
CDK5RAP3-210ENST00000578733 MED14OSP0DP75 135 aa8.1□□□□□ -1.11
CDK5RAP3-210ENST00000578733 DAZ2Q13117 558 aaKnown RBP8.1□□□□□ -1.11
CDK5RAP3-210ENST00000578733 CT83Q5H943 113 aa8.1□□□□□ -1.11
CDK5RAP3-210ENST00000578733 DNLZQ5SXM8 178 aa8.1□□□□□ -1.11
CDK5RAP3-210ENST00000578733 SYT8Q8NBV8 401 aa8.1□□□□□ -1.11
CDK5RAP3-210ENST00000578733 C11orf45Q8TAV5 145 aa8.1□□□□□ -1.11
CDK5RAP3-210ENST00000578733 SFRP2Q96HF1 295 aa8.1□□□□□ -1.11
CDK5RAP3-210ENST00000578733 RNASE7Q9H1E1 156 aaKnown RBP8.1□□□□□ -1.11
CDK5RAP3-210ENST00000578733 NOP10Q9NPE3 64 aaKnown RBP8.1□□□□□ -1.11
CDK5RAP3-210ENST00000578733 GSN-AS1Q9NRJ2 163 aa8.1□□□□□ -1.11
CDK5RAP3-210ENST00000578733 A0A1W2PPQ1 181 aa8.09□□□□□ -1.11
CDK5RAP3-210ENST00000578733 GRIFINA4D1Z8 144 aa8.09□□□□□ -1.11
CDK5RAP3-210ENST00000578733 A8MWL6 223 aa8.09□□□□□ -1.11
CDK5RAP3-210ENST00000578733 RPL19P84098 196 aaKnown RBP8.09□□□□□ -1.11
CDK5RAP3-210ENST00000578733 LGALS9BQ3B8N2 356 aa8.09□□□□□ -1.11
CDK5RAP3-210ENST00000578733 FAM222AQ5U5X8 452 aa8.09□□□□□ -1.11
CDK5RAP3-210ENST00000578733 C11orf72Q8NBR9 251 aa8.09□□□□□ -1.11
CDK5RAP3-210ENST00000578733 OR10G8Q8NGN5 311 aa8.09□□□□□ -1.11
CDK5RAP3-210ENST00000578733 NDUFAF3Q9BU61 184 aa8.09□□□□□ -1.11
CDK5RAP3-210ENST00000578733 IL36BQ9NZH7 164 aa8.09□□□□□ -1.11
CDK5RAP3-210ENST00000578733 DKK2Q9UBU2 259 aa8.09□□□□□ -1.11
CDK5RAP3-210ENST00000578733 PHLDA3Q9Y5J5 127 aa8.09□□□□□ -1.11
CDK5RAP3-210ENST00000578733 MUC4Q99102 2169 aa8.09□□□□□ -1.11
CDK5RAP3-210ENST00000578733 BIRC6Q9NR09 4857 aa8.08□□□□□ -1.12
CDK5RAP3-210ENST00000578733 TRGV1A0A0A0MS02 117 aa8.08□□□□□ -1.12
CDK5RAP3-210ENST00000578733 H3BVH4 76 aa8.08□□□□□ -1.12
CDK5RAP3-210ENST00000578733 M0R2P5 195 aa8.08□□□□□ -1.12
CDK5RAP3-210ENST00000578733 MT-ND4LP03901 98 aa8.08□□□□□ -1.12
CDK5RAP3-210ENST00000578733 PRM2P04554 102 aa8.08□□□□□ -1.12
CDK5RAP3-210ENST00000578733 DAD1P61803 113 aa8.08□□□□□ -1.12
CDK5RAP3-210ENST00000578733 ZNF575Q86XF7 245 aa8.08□□□□□ -1.12
CDK5RAP3-210ENST00000578733 BORCS7Q96B45 105 aa8.08□□□□□ -1.12
CDK5RAP3-210ENST00000578733 ANAPC16Q96DE5 110 aa8.08□□□□□ -1.12
CDK5RAP3-210ENST00000578733 MDFICQ9P1T7 246 aa8.08□□□□□ -1.12
CDK5RAP3-210ENST00000578733 STAB2Q8WWQ8 2551 aa8.08□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 70 ms