RNA–Protein interactions for RNA: ENST00000578700.5

SS18-210, Transcript of SS18, nBAF chromatin remodeling complex subunit, humanhuman

TSL 5

Gene SS18, Length 575 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18-210ENST00000578700 DCANP1Q8TF63 244 aa7.57□□□□□ -1.2
SS18-210ENST00000578700 NEU1Q99519 415 aa7.57□□□□□ -1.2
SS18-210ENST00000578700 GNB1LQ9BYB4 327 aa7.57□□□□□ -1.2
SS18-210ENST00000578700 TRAV25A0A0B4J276 109 aa7.56□□□□□ -1.2
SS18-210ENST00000578700 A0A1B0GW15 77 aa7.56□□□□□ -1.2
SS18-210ENST00000578700 K7EQG2 157 aa7.56□□□□□ -1.2
SS18-210ENST00000578700 SPINK4O60575 86 aa7.56□□□□□ -1.2
SS18-210ENST00000578700 HLA-DQA1P01909 254 aa7.56□□□□□ -1.2
SS18-210ENST00000578700 ORM1P02763 201 aa7.56□□□□□ -1.2
SS18-210ENST00000578700 ZNF688P0C7X2 276 aa7.56□□□□□ -1.2
SS18-210ENST00000578700 PRB4P10163 310 aaPredicted RBP7.56□□□□□ -1.2
SS18-210ENST00000578700 ACTL10Q5JWF8 245 aa7.56□□□□□ -1.2
SS18-210ENST00000578700 MRPL54Q6P161 138 aaKnown RBP7.56□□□□□ -1.2
SS18-210ENST00000578700 LINC00322Q6ZN03 302 aaPredicted RBP7.56□□□□□ -1.2
SS18-210ENST00000578700 NUP35Q8NFH5 326 aa7.56□□□□□ -1.2
SS18-210ENST00000578700 C20orf173Q96LM9 149 aa7.56□□□□□ -1.2
SS18-210ENST00000578700 SNURFLB1AK76 121 aa7.55□□□□□ -1.2
SS18-210ENST00000578700 GPX1P07203 203 aa7.55□□□□□ -1.2
SS18-210ENST00000578700 CSN3P07498 182 aa7.55□□□□□ -1.2
SS18-210ENST00000578700 EDN2P20800 178 aa7.55□□□□□ -1.2
SS18-210ENST00000578700 TSPOP30536 169 aa7.55□□□□□ -1.2
SS18-210ENST00000578700 LEPP41159 167 aa7.55□□□□□ -1.2
SS18-210ENST00000578700 HBBP68871 147 aa7.55□□□□□ -1.2
SS18-210ENST00000578700 FABP9Q0Z7S8 132 aa7.55□□□□□ -1.2
SS18-210ENST00000578700 RIGQ13278 110 aa7.55□□□□□ -1.2
SS18-210ENST00000578700 PGLYRP4Q96LB8 373 aa7.55□□□□□ -1.2
SS18-210ENST00000578700 TPPP3Q9BW30 176 aa7.55□□□□□ -1.2
SS18-210ENST00000578700 MRPL18Q9H0U6 180 aaKnown RBP7.55□□□□□ -1.2
SS18-210ENST00000578700 TMSB15BA0A087X1C1 80 aa7.54□□□□□ -1.2
SS18-210ENST00000578700 TRAV21A0A0B4J279 112 aa7.54□□□□□ -1.2
SS18-210ENST00000578700 A0A1B0GUT8 65 aa7.54□□□□□ -1.2
SS18-210ENST00000578700 TRGC1P0CF51 173 aa7.54□□□□□ -1.2
SS18-210ENST00000578700 CRIP1P50238 77 aa7.54□□□□□ -1.2
SS18-210ENST00000578700 FOXA3P55318 350 aaPredicted RBP7.54□□□□□ -1.2
SS18-210ENST00000578700 CMC4P56277 68 aaPredicted RBP7.54□□□□□ -1.2
SS18-210ENST00000578700 NDUFA6P56556 154 aa7.54□□□□□ -1.2
SS18-210ENST00000578700 FOXI2Q6ZQN5 318 aa7.54□□□□□ -1.2
SS18-210ENST00000578700 Q8N1Y9 231 aa7.54□□□□□ -1.2
SS18-210ENST00000578700 SPAG8Q99932 426 aaPredicted RBP7.54□□□□□ -1.2
SS18-210ENST00000578700 SPATA25Q9BR10 227 aa7.54□□□□□ -1.2
SS18-210ENST00000578700 SIGLEC8Q9NYZ4 499 aa7.54□□□□□ -1.2
SS18-210ENST00000578700 SELENOKQ9Y6D0 94 aa7.54□□□□□ -1.2
SS18-210ENST00000578700 DNAH10Q8IVF4 4471 aa7.53□□□□□ -1.2
SS18-210ENST00000578700 HIST1H2BKO60814 126 aa7.53□□□□□ -1.2
SS18-210ENST00000578700 APCSP02743 223 aa7.53□□□□□ -1.2
SS18-210ENST00000578700 HIST1H2BJP06899 126 aa7.53□□□□□ -1.2
SS18-210ENST00000578700 ZNF705DP0CH99 300 aaPredicted RBP7.53□□□□□ -1.2
SS18-210ENST00000578700 ZNF705BP0CI00 300 aaPredicted RBP7.53□□□□□ -1.2
SS18-210ENST00000578700 HIST1H2BOP23527 126 aa7.53□□□□□ -1.2
SS18-210ENST00000578700 HIST1H2BBP33778 126 aa7.53□□□□□ -1.2
SS18-210ENST00000578700 CAMPP49913 170 aa7.53□□□□□ -1.2
SS18-210ENST00000578700 HIST1H2BDP58876 126 aa7.53□□□□□ -1.2
SS18-210ENST00000578700 HIST1H2BCP62807 126 aa7.53□□□□□ -1.2
SS18-210ENST00000578700 HIST2H2BEQ16778 126 aa7.53□□□□□ -1.2
SS18-210ENST00000578700 DEFB114Q30KQ6 69 aa7.53□□□□□ -1.2
SS18-210ENST00000578700 HIST2H2BFQ5QNW6 126 aaPredicted RBP7.53□□□□□ -1.2
SS18-210ENST00000578700 HIST1H2BHQ93079 126 aa7.53□□□□□ -1.2
SS18-210ENST00000578700 ODF3Q96PU9 254 aa7.53□□□□□ -1.2
SS18-210ENST00000578700 HIST1H2BNQ99877 126 aa7.53□□□□□ -1.2
SS18-210ENST00000578700 HIST1H2BMQ99879 126 aa7.53□□□□□ -1.2
SS18-210ENST00000578700 C19orf73Q9NVV2 129 aa7.53□□□□□ -1.2
SS18-210ENST00000578700 A0A0J9YX75 114 aa7.52□□□□□ -1.21
SS18-210ENST00000578700 F2Z2F3 143 aa7.52□□□□□ -1.21
SS18-210ENST00000578700 F6UB75 175 aa7.52□□□□□ -1.21
SS18-210ENST00000578700 GZMBP10144 247 aa7.52□□□□□ -1.21
SS18-210ENST00000578700 RNASE4P34096 147 aaKnown RBP7.52□□□□□ -1.21
SS18-210ENST00000578700 ZNF80P51504 273 aaPredicted RBP7.52□□□□□ -1.21
SS18-210ENST00000578700 SNRPEP62304 92 aaKnown RBP7.52□□□□□ -1.21
SS18-210ENST00000578700 LINC01559Q495D7 138 aa7.52□□□□□ -1.21
SS18-210ENST00000578700 TMEM136Q6ZRR5 245 aa7.52□□□□□ -1.21
SS18-210ENST00000578700 TMEM61Q8N0U2 210 aa7.52□□□□□ -1.21
SS18-210ENST00000578700 FER1L6-AS1Q8NA97 138 aa7.52□□□□□ -1.21
SS18-210ENST00000578700 OR2K2Q8NGT1 345 aa7.52□□□□□ -1.21
SS18-210ENST00000578700 GTSF1Q8WW33 167 aa7.52□□□□□ -1.21
SS18-210ENST00000578700 FAM110AQ9BQ89 295 aa7.52□□□□□ -1.21
SS18-210ENST00000578700 RETNQ9HD89 108 aa7.52□□□□□ -1.21
SS18-210ENST00000578700 HERC2O95714 4834 aa7.52□□□□□ -1.21
SS18-210ENST00000578700 LOC105371267A0A1B0GV96 52 aa7.51□□□□□ -1.21
SS18-210ENST00000578700 J3KRW8 73 aa7.51□□□□□ -1.21
SS18-210ENST00000578700 CRISP2P16562 243 aa7.51□□□□□ -1.21
SS18-210ENST00000578700 S100A2P29034 98 aa7.51□□□□□ -1.21
SS18-210ENST00000578700 CD300EQ496F6 205 aaPredicted RBP7.51□□□□□ -1.21
SS18-210ENST00000578700 SMIM15Q7Z3B0 74 aa7.51□□□□□ -1.21
SS18-210ENST00000578700 KMT2AQ03164 3969 aa7.51□□□□□ -1.21
SS18-210ENST00000578700 A0A1B0GXF2 115 aa7.5□□□□□ -1.21
SS18-210ENST00000578700 RBMY1BA6NDE4 496 aaKnown RBP7.5□□□□□ -1.21
SS18-210ENST00000578700 RBMY1EA6NEQ0 496 aaKnown RBP7.5□□□□□ -1.21
SS18-210ENST00000578700 C5orf52A6NGY3 159 aa7.5□□□□□ -1.21
SS18-210ENST00000578700 RBMY1DP0C7P1 496 aaKnown RBP7.5□□□□□ -1.21
SS18-210ENST00000578700 S100A4P26447 101 aaKnown RBP7.5□□□□□ -1.21
SS18-210ENST00000578700 DEFB131AP59861 70 aa7.5□□□□□ -1.21
SS18-210ENST00000578700 LYZL1Q6UWQ5 148 aa7.5□□□□□ -1.21
SS18-210ENST00000578700 FAM159AQ6UWV7 190 aa7.5□□□□□ -1.21
SS18-210ENST00000578700 ZFAND2AQ8N6M9 145 aa7.5□□□□□ -1.21
SS18-210ENST00000578700 IL17DQ8TAD2 202 aa7.5□□□□□ -1.21
SS18-210ENST00000578700 KCNS1Q96KK3 526 aa7.5□□□□□ -1.21
SS18-210ENST00000578700 FAM19A4Q96LR4 140 aa7.5□□□□□ -1.21
SS18-210ENST00000578700 NAGKQ9UJ70 344 aa7.5□□□□□ -1.21
SS18-210ENST00000578700 HECTD4Q9Y4D8 3996 aa7.5□□□□□ -1.21
SS18-210ENST00000578700 RYR1P21817 5038 aa7.5□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 41.6 ms