RNA–Protein interactions for RNA: ENST00000578516.1

CDC42EP4-203, Transcript of CDC42 effector protein 4, humanhuman

TSL 4

Gene CDC42EP4, Length 572 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42EP4-203ENST00000578516 BCL2P10415 239 aa15.32■□□□□ 0.04
CDC42EP4-203ENST00000578516 SAPCD1Q5SSQ6 148 aa15.32■□□□□ 0.04
CDC42EP4-203ENST00000578516 IBA57Q5T440 356 aaKnown RBP15.32■□□□□ 0.04
CDC42EP4-203ENST00000578516 MUC4Q99102 2169 aa15.32■□□□□ 0.04
CDC42EP4-203ENST00000578516 NACAE9PAV3 2078 aa15.31■□□□□ 0.04
CDC42EP4-203ENST00000578516 IGHV3-16A0A0C4DH30 117 aa15.31■□□□□ 0.04
CDC42EP4-203ENST00000578516 LCE6AA0A183 80 aa15.31■□□□□ 0.04
CDC42EP4-203ENST00000578516 FBLL1A6NHQ2 334 aaKnown RBP15.31■□□□□ 0.04
CDC42EP4-203ENST00000578516 TEX46H3BTG2 121 aa15.31■□□□□ 0.04
CDC42EP4-203ENST00000578516 LTAP01374 205 aa15.31■□□□□ 0.04
CDC42EP4-203ENST00000578516 PFN1P07737 140 aaKnown RBP15.31■□□□□ 0.04
CDC42EP4-203ENST00000578516 DAZ2Q13117 558 aaKnown RBP15.31■□□□□ 0.04
CDC42EP4-203ENST00000578516 C11orf52Q96A22 123 aa15.31■□□□□ 0.04
CDC42EP4-203ENST00000578516 TCEAL7Q9BRU2 100 aa15.31■□□□□ 0.04
CDC42EP4-203ENST00000578516 APLNQ9ULZ1 77 aa15.31■□□□□ 0.04
CDC42EP4-203ENST00000578516 TRBV6-1A0A0K0K1D8 114 aa15.3■□□□□ 0.04
CDC42EP4-203ENST00000578516 SH2D1AO60880 128 aa15.3■□□□□ 0.04
CDC42EP4-203ENST00000578516 TDRG1Q3Y452 100 aa15.3■□□□□ 0.04
CDC42EP4-203ENST00000578516 TRGV11A0A075B6L2 103 aa15.29■□□□□ 0.04
CDC42EP4-203ENST00000578516 SPINK4O60575 86 aa15.29■□□□□ 0.04
CDC42EP4-203ENST00000578516 MEF2BQ02080 365 aaPredicted RBP15.29■□□□□ 0.04
CDC42EP4-203ENST00000578516 TMEM88Q6PEY1 159 aa15.29■□□□□ 0.04
CDC42EP4-203ENST00000578516 SDF2L1Q9HCN8 221 aa15.29■□□□□ 0.04
CDC42EP4-203ENST00000578516 IGKV3D-20A0A0C4DH25 116 aa15.28■□□□□ 0.04
CDC42EP4-203ENST00000578516 F5H768 121 aa15.28■□□□□ 0.04
CDC42EP4-203ENST00000578516 M0R036 132 aa15.28■□□□□ 0.04
CDC42EP4-203ENST00000578516 IFNA1P01562 189 aa15.28■□□□□ 0.04
CDC42EP4-203ENST00000578516 IGHV3-53P01767 116 aa15.28■□□□□ 0.04
CDC42EP4-203ENST00000578516 HOXA5P20719 270 aa15.28■□□□□ 0.04
CDC42EP4-203ENST00000578516 RPL35P42766 123 aaKnown RBP15.28■□□□□ 0.04
CDC42EP4-203ENST00000578516 BLOC1S1P78537 153 aa15.28■□□□□ 0.04
CDC42EP4-203ENST00000578516 LYSTQ99698 3801 aa15.27■□□□□ 0.04
CDC42EP4-203ENST00000578516 RAB19A4D1S5 217 aa15.27■□□□□ 0.04
CDC42EP4-203ENST00000578516 ATP5G1P05496 136 aa15.27■□□□□ 0.04
CDC42EP4-203ENST00000578516 LINC00476Q8WZB0 136 aa15.27■□□□□ 0.04
CDC42EP4-203ENST00000578516 VAX2Q9UIW0 290 aa15.27■□□□□ 0.04
CDC42EP4-203ENST00000578516 ZFP30Q9Y2G7 519 aa15.27■□□□□ 0.04
CDC42EP4-203ENST00000578516 CENPWQ5EE01 88 aa15.26■□□□□ 0.03
CDC42EP4-203ENST00000578516 BAGE2Q86Y30 109 aa15.26■□□□□ 0.03
CDC42EP4-203ENST00000578516 LYPD6BQ8NI32 183 aa15.26■□□□□ 0.03
CDC42EP4-203ENST00000578516 RYR2Q92736 4967 aa15.25■□□□□ 0.03
CDC42EP4-203ENST00000578516 TMSB15BA0A087X1C1 80 aa15.25■□□□□ 0.03
CDC42EP4-203ENST00000578516 PGPEP1LA6NFU8 196 aa15.25■□□□□ 0.03
CDC42EP4-203ENST00000578516 TEX261Q6UWH6 196 aa15.25■□□□□ 0.03
CDC42EP4-203ENST00000578516 COX8CQ7Z4L0 72 aa15.25■□□□□ 0.03
CDC42EP4-203ENST00000578516 TRGV2A0A075B6R0 118 aa15.24■□□□□ 0.03
CDC42EP4-203ENST00000578516 FABP5P3A8MUU1 101 aa15.24■□□□□ 0.03
CDC42EP4-203ENST00000578516 LY6G6CO95867 125 aa15.24■□□□□ 0.03
CDC42EP4-203ENST00000578516 RPL19P84098 196 aaKnown RBP15.24■□□□□ 0.03
CDC42EP4-203ENST00000578516 TOR2AQ5JU69 321 aa15.24■□□□□ 0.03
CDC42EP4-203ENST00000578516 KCNS1Q96KK3 526 aa15.24■□□□□ 0.03
CDC42EP4-203ENST00000578516 MLST8Q9BVC4 326 aa15.24■□□□□ 0.03
CDC42EP4-203ENST00000578516 MED9Q9NWA0 146 aa15.24■□□□□ 0.03
CDC42EP4-203ENST00000578516 TRBV20OR9-2A0A075B6H5 130 aa15.23■□□□□ 0.03
CDC42EP4-203ENST00000578516 GRIFINA4D1Z8 144 aa15.23■□□□□ 0.03
CDC42EP4-203ENST00000578516 ORM1P02763 201 aa15.23■□□□□ 0.03
CDC42EP4-203ENST00000578516 SFTA3P0C7M3 94 aa15.23■□□□□ 0.03
CDC42EP4-203ENST00000578516 RNASE3P12724 160 aaKnown RBP15.23■□□□□ 0.03
CDC42EP4-203ENST00000578516 ZNF674Q2M3X9 581 aa15.23■□□□□ 0.03
CDC42EP4-203ENST00000578516 FAM162BQ5T6X4 162 aa15.23■□□□□ 0.03
CDC42EP4-203ENST00000578516 PRR27Q6MZM9 219 aa15.23■□□□□ 0.03
CDC42EP4-203ENST00000578516 RYR3Q15413 4870 aa15.23■□□□□ 0.03
CDC42EP4-203ENST00000578516 HYDINQ4G0P3 5121 aa15.22■□□□□ 0.03
CDC42EP4-203ENST00000578516 A0A0J9YY99 117 aa15.22■□□□□ 0.03
CDC42EP4-203ENST00000578516 RBFOX3A6NFN3 312 aa15.22■□□□□ 0.03
CDC42EP4-203ENST00000578516 IGLV2-8P01709 118 aa15.22■□□□□ 0.03
CDC42EP4-203ENST00000578516 OR5I1Q13606 314 aa15.22■□□□□ 0.03
CDC42EP4-203ENST00000578516 ZNF575Q86XF7 245 aa15.22■□□□□ 0.03
CDC42EP4-203ENST00000578516 C9orf85Q96MD7 179 aa15.22■□□□□ 0.03
CDC42EP4-203ENST00000578516 NDUFAF3Q9BU61 184 aa15.22■□□□□ 0.03
CDC42EP4-203ENST00000578516 B4DEV8 164 aa15.21■□□□□ 0.03
CDC42EP4-203ENST00000578516 KRBOX1C9JBD0 128 aa15.21■□□□□ 0.03
CDC42EP4-203ENST00000578516 PDE6DO43924 150 aa15.21■□□□□ 0.03
CDC42EP4-203ENST00000578516 S100A9P06702 114 aaKnown RBP15.21■□□□□ 0.03
CDC42EP4-203ENST00000578516 ZNF506Q5JVG8 444 aa15.21■□□□□ 0.03
CDC42EP4-203ENST00000578516 POM121L12Q8N7R1 296 aa15.21■□□□□ 0.03
CDC42EP4-203ENST00000578516 TXNDC17Q9BRA2 123 aa15.21■□□□□ 0.03
CDC42EP4-203ENST00000578516 H3BVH4 76 aa15.2■□□□□ 0.02
CDC42EP4-203ENST00000578516 SPXQ9BT56 116 aa15.2■□□□□ 0.02
CDC42EP4-203ENST00000578516 VPS13DQ5THJ4 4388 aa15.2■□□□□ 0.02
CDC42EP4-203ENST00000578516 TRAV26-1A0A087WT03 109 aa15.19■□□□□ 0.02
CDC42EP4-203ENST00000578516 C9JCJ5 164 aa15.19■□□□□ 0.02
CDC42EP4-203ENST00000578516 M0R2P5 195 aa15.19■□□□□ 0.02
CDC42EP4-203ENST00000578516 MGST1P10620 155 aaKnown RBP15.19■□□□□ 0.02
CDC42EP4-203ENST00000578516 LGALS9BQ3B8N2 356 aa15.19■□□□□ 0.02
CDC42EP4-203ENST00000578516 ZNF479Q96JC4 524 aa15.19■□□□□ 0.02
CDC42EP4-203ENST00000578516 CEBPGP53567 150 aa15.18■□□□□ 0.02
CDC42EP4-203ENST00000578516 LINC01559Q495D7 138 aa15.18■□□□□ 0.02
CDC42EP4-203ENST00000578516 NUDT3O95989 172 aa15.17■□□□□ 0.02
CDC42EP4-203ENST00000578516 ASIPP42127 132 aa15.17■□□□□ 0.02
CDC42EP4-203ENST00000578516 GNG4P50150 75 aa15.17■□□□□ 0.02
CDC42EP4-203ENST00000578516 RASL10AQ92737 203 aa15.17■□□□□ 0.02
CDC42EP4-203ENST00000578516 C18orf15Q96N68 181 aa15.17■□□□□ 0.02
CDC42EP4-203ENST00000578516 FAM210AQ96ND0 272 aa15.17■□□□□ 0.02
CDC42EP4-203ENST00000578516 PARLQ9H300 379 aa15.17■□□□□ 0.02
CDC42EP4-203ENST00000578516 TAGLN2P37802 199 aaKnown RBP15.16■□□□□ 0.02
CDC42EP4-203ENST00000578516 VSIG2Q96IQ7 327 aa15.16■□□□□ 0.02
CDC42EP4-203ENST00000578516 EIF5A2Q9GZV4 153 aaKnown RBP15.16■□□□□ 0.02
CDC42EP4-203ENST00000578516 S100A4P26447 101 aaKnown RBP15.15■□□□□ 0.02
CDC42EP4-203ENST00000578516 TCTAP57738 103 aa15.15■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 63 ms