RNA–Protein interactions for RNA: ENST00000578067.5

LIMD2-203, Transcript of LIM domain containing 2, humanhuman

TSL 1 (best)

Gene LIMD2, Length 2,019 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMD2-203ENST00000578067 KIR3DS1Q14943 382 aa20.72■□□□□ 0.91
LIMD2-203ENST00000578067 DLX4Q92988 240 aaPredicted RBP20.72■□□□□ 0.91
LIMD2-203ENST00000578067 ACANP16112 2415 aa20.72■□□□□ 0.91
LIMD2-203ENST00000578067 A0A0J9YX75 114 aa20.71■□□□□ 0.91
LIMD2-203ENST00000578067 KLLNB2CW77 178 aa20.71■□□□□ 0.91
LIMD2-203ENST00000578067 HIST2H2BDQ6DRA6 164 aa20.71■□□□□ 0.91
LIMD2-203ENST00000578067 RNF114Q9Y508 228 aa20.71■□□□□ 0.91
LIMD2-203ENST00000578067 MYO9AB2RTY4 2548 aa20.71■□□□□ 0.91
LIMD2-203ENST00000578067 HILS1P60008 231 aa20.71■□□□□ 0.91
LIMD2-203ENST00000578067 ORMDL3Q8N138 153 aa20.71■□□□□ 0.91
LIMD2-203ENST00000578067 OR10AG1Q8NH19 301 aa20.71■□□□□ 0.91
LIMD2-203ENST00000578067 FASNP49327 2511 aaKnown RBP20.71■□□□□ 0.91
LIMD2-203ENST00000578067 KRTDAPP60985 99 aa20.7■□□□□ 0.9
LIMD2-203ENST00000578067 LINC01006Q8NI28 216 aa20.7■□□□□ 0.9
LIMD2-203ENST00000578067 EBLN2Q6P2I7 272 aa20.7■□□□□ 0.9
LIMD2-203ENST00000578067 PRELID3AQ96N28 172 aa20.7■□□□□ 0.9
LIMD2-203ENST00000578067 ODF3Q96PU9 254 aa20.7■□□□□ 0.9
LIMD2-203ENST00000578067 CSN3P07498 182 aa20.69■□□□□ 0.9
LIMD2-203ENST00000578067 CD28P10747 220 aa20.69■□□□□ 0.9
LIMD2-203ENST00000578067 ANXA2RQ3ZCQ2 193 aa20.69■□□□□ 0.9
LIMD2-203ENST00000578067 IGHV4-4A0A075B6R2 117 aa20.68■□□□□ 0.9
LIMD2-203ENST00000578067 CACNG7P62955 275 aa20.68■□□□□ 0.9
LIMD2-203ENST00000578067 H3BVH4 76 aa20.68■□□□□ 0.9
LIMD2-203ENST00000578067 RAB4AP20338 218 aa20.68■□□□□ 0.9
LIMD2-203ENST00000578067 C11orf44Q8N8P7 122 aa20.68■□□□□ 0.9
LIMD2-203ENST00000578067 RNF185Q96GF1 192 aa20.68■□□□□ 0.9
LIMD2-203ENST00000578067 LY6G6DO95868 133 aa20.67■□□□□ 0.9
LIMD2-203ENST00000578067 CKS2P33552 79 aa20.67■□□□□ 0.9
LIMD2-203ENST00000578067 LEPP41159 167 aa20.67■□□□□ 0.9
LIMD2-203ENST00000578067 PKIAP61925 76 aa20.67■□□□□ 0.9
LIMD2-203ENST00000578067 ASIPP42127 132 aa20.66■□□□□ 0.9
LIMD2-203ENST00000578067 RAX2Q96IS3 184 aa20.66■□□□□ 0.9
LIMD2-203ENST00000578067 SPANXN1Q5VSR9 72 aa20.66■□□□□ 0.9
LIMD2-203ENST00000578067 HECTD1Q9ULT8 2610 aa20.65■□□□□ 0.9
LIMD2-203ENST00000578067 DUSP14O95147 198 aaKnown RBP20.65■□□□□ 0.9
LIMD2-203ENST00000578067 C3orf79P0CE67 100 aa20.65■□□□□ 0.9
LIMD2-203ENST00000578067 TRAV2A0A0B4J234 112 aa20.65■□□□□ 0.9
LIMD2-203ENST00000578067 IGHV1-24A0A0C4DH33 117 aa20.65■□□□□ 0.9
LIMD2-203ENST00000578067 S100A4P26447 101 aaKnown RBP20.65■□□□□ 0.9
LIMD2-203ENST00000578067 FOXI2Q6ZQN5 318 aa20.65■□□□□ 0.9
LIMD2-203ENST00000578067 SMIM15Q7Z3B0 74 aa20.65■□□□□ 0.9
LIMD2-203ENST00000578067 PRSS3P2Q8NHM4 247 aa20.65■□□□□ 0.9
LIMD2-203ENST00000578067 A0A1W2PRX2 142 aa20.64■□□□□ 0.89
LIMD2-203ENST00000578067 LINC00587B1AMM8 73 aa20.64■□□□□ 0.89
LIMD2-203ENST00000578067 PMCHL1Q16048 86 aa20.64■□□□□ 0.89
LIMD2-203ENST00000578067 ZNF664Q8N3J9 261 aa20.64■□□□□ 0.89
LIMD2-203ENST00000578067 TSTD3H0UI37 97 aa20.63■□□□□ 0.89
LIMD2-203ENST00000578067 PPBPP02775 128 aa20.63■□□□□ 0.89
LIMD2-203ENST00000578067 MED14OSP0DP75 135 aa20.63■□□□□ 0.89
LIMD2-203ENST00000578067 FHL3Q13643 280 aa20.63■□□□□ 0.89
LIMD2-203ENST00000578067 DYNLRB2Q8TF09 96 aa20.63■□□□□ 0.89
LIMD2-203ENST00000578067 TIMM8BQ9Y5J9 83 aaPredicted RBP20.63■□□□□ 0.89
LIMD2-203ENST00000578067 SMKR1H3BMG3 65 aa20.63■□□□□ 0.89
LIMD2-203ENST00000578067 TMEM61Q8N0U2 210 aa20.63■□□□□ 0.89
LIMD2-203ENST00000578067 CITED2Q99967 270 aaPredicted RBP20.63■□□□□ 0.89
LIMD2-203ENST00000578067 PRO1933Q9H354 126 aa20.63■□□□□ 0.89
LIMD2-203ENST00000578067 TSSC4Q9Y5U2 329 aaPredicted RBP20.63■□□□□ 0.89
LIMD2-203ENST00000578067 ANK3Q12955 4377 aaKnown RBP20.63■□□□□ 0.89
LIMD2-203ENST00000578067 C7orf71A4D174 169 aa20.62■□□□□ 0.89
LIMD2-203ENST00000578067 IGKV3-20P01619 116 aa20.62■□□□□ 0.89
LIMD2-203ENST00000578067 EVI2AP22794 236 aa20.62■□□□□ 0.89
LIMD2-203ENST00000578067 FA2HQ7L5A8 372 aa20.62■□□□□ 0.89
LIMD2-203ENST00000578067 Q8N976 141 aa20.62■□□□□ 0.89
LIMD2-203ENST00000578067 CCL24O00175 119 aa20.61■□□□□ 0.89
LIMD2-203ENST00000578067 GNRH2O43555 120 aa20.61■□□□□ 0.89
LIMD2-203ENST00000578067 AP5S1Q9NUS5 200 aa20.61■□□□□ 0.89
LIMD2-203ENST00000578067 NCR2O95944 276 aa20.61■□□□□ 0.89
LIMD2-203ENST00000578067 FAM159AQ6UWV7 190 aa20.61■□□□□ 0.89
LIMD2-203ENST00000578067 JMJD8Q96S16 334 aa20.61■□□□□ 0.89
LIMD2-203ENST00000578067 SIGLEC8Q9NYZ4 499 aa20.61■□□□□ 0.89
LIMD2-203ENST00000578067 TRAV12-3A0A0B4J271 114 aa20.6■□□□□ 0.89
LIMD2-203ENST00000578067 NPYP01303 97 aa20.6■□□□□ 0.89
LIMD2-203ENST00000578067 TSPOP30536 169 aa20.6■□□□□ 0.89
LIMD2-203ENST00000578067 IFI27P40305 119 aaPredicted RBP20.6■□□□□ 0.89
LIMD2-203ENST00000578067 DEFB114Q30KQ6 69 aa20.6■□□□□ 0.89
LIMD2-203ENST00000578067 TEX43Q6ZNM6 134 aa20.6■□□□□ 0.89
LIMD2-203ENST00000578067 SCRT2Q9NQ03 307 aa20.6■□□□□ 0.89
LIMD2-203ENST00000578067 LOC389332A0A1B0GUA5 103 aa20.6■□□□□ 0.89
LIMD2-203ENST00000578067 NDUFA7O95182 113 aa20.6■□□□□ 0.89
LIMD2-203ENST00000578067 CDKN1BP46527 198 aa20.58■□□□□ 0.89
LIMD2-203ENST00000578067 DEFB131AP59861 70 aa20.58■□□□□ 0.89
LIMD2-203ENST00000578067 LAMTOR2Q9Y2Q5 125 aa20.58■□□□□ 0.89
LIMD2-203ENST00000578067 PHLDA3Q9Y5J5 127 aa20.58■□□□□ 0.89
LIMD2-203ENST00000578067 TCF21O43680 179 aa20.57■□□□□ 0.88
LIMD2-203ENST00000578067 LEPROTL1O95214 131 aa20.57■□□□□ 0.88
LIMD2-203ENST00000578067 RNASE3P12724 160 aaKnown RBP20.57■□□□□ 0.88
LIMD2-203ENST00000578067 BTF3P20290 206 aaKnown RBP20.57■□□□□ 0.88
LIMD2-203ENST00000578067 AMTNQ6UX39 209 aa20.56■□□□□ 0.88
LIMD2-203ENST00000578067 M0R381 172 aa20.56■□□□□ 0.88
LIMD2-203ENST00000578067 SPINK13Q1W4C9 94 aa20.56■□□□□ 0.88
LIMD2-203ENST00000578067 TRAV12-2A0A075B6T6 113 aa20.55■□□□□ 0.88
LIMD2-203ENST00000578067 CD300EQ496F6 205 aaPredicted RBP20.55■□□□□ 0.88
LIMD2-203ENST00000578067 GAS8-AS1O95177 125 aa20.54■□□□□ 0.88
LIMD2-203ENST00000578067 TDRG1Q3Y452 100 aa20.54■□□□□ 0.88
LIMD2-203ENST00000578067 KNCNA6PVL3 124 aa20.54■□□□□ 0.88
LIMD2-203ENST00000578067 SPRY2O43597 315 aa20.54■□□□□ 0.88
LIMD2-203ENST00000578067 MAP1LC3AQ9H492 121 aa20.54■□□□□ 0.88
LIMD2-203ENST00000578067 TNFRSF6BO95407 300 aa20.53■□□□□ 0.88
LIMD2-203ENST00000578067 HLA-DRB4P13762 266 aa20.53■□□□□ 0.88
LIMD2-203ENST00000578067 TMEM70Q9BUB7 260 aa20.53■□□□□ 0.88
Retrieved 100 of 20,778 RNA–protein pairs in 58.5 ms