RNA–Protein interactions for RNA: ENST00000577827.5

PTPRM-205, Transcript of protein tyrosine phosphatase, receptor type M, humanhuman

TSL 2

Gene PTPRM, Length 4,640 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRM-205ENST00000577827 DSCR9P59020 149 aa8.14□□□□□ -1.11
PTPRM-205ENST00000577827 TCF15Q12870 199 aa8.14□□□□□ -1.11
PTPRM-205ENST00000577827 IGLV11-55A0A075B6I3 123 aa8.13□□□□□ -1.11
PTPRM-205ENST00000577827 RHOHQ15669 191 aa8.13□□□□□ -1.11
PTPRM-205ENST00000577827 SPRNQ5BIV9 151 aa8.13□□□□□ -1.11
PTPRM-205ENST00000577827 SVIPQ8NHG7 77 aa8.13□□□□□ -1.11
PTPRM-205ENST00000577827 CFHR4Q92496 578 aa8.13□□□□□ -1.11
PTPRM-205ENST00000577827 SPRY4Q9C004 299 aa8.13□□□□□ -1.11
PTPRM-205ENST00000577827 WI2-2373I1.2A0A1W2PRP0 233 aa8.13□□□□□ -1.11
PTPRM-205ENST00000577827 PLCE1Q9P212 2302 aa8.13□□□□□ -1.11
PTPRM-205ENST00000577827 IGKV1D-37A0A075B6S9 117 aa8.13□□□□□ -1.11
PTPRM-205ENST00000577827 LINC00158P58513 81 aa8.13□□□□□ -1.11
PTPRM-205ENST00000577827 NPC2P61916 151 aa8.13□□□□□ -1.11
PTPRM-205ENST00000577827 PRIMA1Q86XR5 153 aa8.13□□□□□ -1.11
PTPRM-205ENST00000577827 DKK4Q9UBT3 224 aa8.13□□□□□ -1.11
PTPRM-205ENST00000577827 G3V318 75 aa8.12□□□□□ -1.11
PTPRM-205ENST00000577827 CFC1BP0CG36 223 aa8.12□□□□□ -1.11
PTPRM-205ENST00000577827 CFC1P0CG37 223 aa8.12□□□□□ -1.11
PTPRM-205ENST00000577827 IGHV1OR15-1A0A075B7D0 117 aa8.12□□□□□ -1.11
PTPRM-205ENST00000577827 LY6HO94772 140 aa8.12□□□□□ -1.11
PTPRM-205ENST00000577827 GDF5OSQ5U4N7 250 aa8.12□□□□□ -1.11
PTPRM-205ENST00000577827 ODF1Q14990 250 aa8.12□□□□□ -1.11
PTPRM-205ENST00000577827 UTF1Q5T230 341 aa8.12□□□□□ -1.11
PTPRM-205ENST00000577827 MRPL36Q9P0J6 103 aaKnown RBP8.12□□□□□ -1.11
PTPRM-205ENST00000577827 NDUFA12Q9UI09 145 aa8.12□□□□□ -1.11
PTPRM-205ENST00000577827 TEX22C9J3V5 150 aa8.12□□□□□ -1.11
PTPRM-205ENST00000577827 SH2D6Q7Z4S9 175 aa8.12□□□□□ -1.11
PTPRM-205ENST00000577827 B4DSR2 109 aa8.11□□□□□ -1.11
PTPRM-205ENST00000577827 TEN1Q86WV5 123 aa8.11□□□□□ -1.11
PTPRM-205ENST00000577827 H3BUA1 57 aa8.11□□□□□ -1.11
PTPRM-205ENST00000577827 DEFB104AQ8WTQ1 72 aa8.11□□□□□ -1.11
PTPRM-205ENST00000577827 TRGV4A0A0C4DH28 118 aa8.11□□□□□ -1.11
PTPRM-205ENST00000577827 GAGE12JA6NER3 117 aa8.11□□□□□ -1.11
PTPRM-205ENST00000577827 GAGE7O76087 117 aa8.11□□□□□ -1.11
PTPRM-205ENST00000577827 INSP01308 110 aa8.11□□□□□ -1.11
PTPRM-205ENST00000577827 IGLV1-47P01700 117 aa8.11□□□□□ -1.11
PTPRM-205ENST00000577827 GAGE12FP0CL80 117 aa8.11□□□□□ -1.11
PTPRM-205ENST00000577827 GAGE12GP0CL81 117 aa8.11□□□□□ -1.11
PTPRM-205ENST00000577827 GAGE12IP0CL82 117 aa8.11□□□□□ -1.11
PTPRM-205ENST00000577827 GAGE4Q13068 117 aa8.11□□□□□ -1.11
PTPRM-205ENST00000577827 DNAJC30Q96LL9 226 aa8.11□□□□□ -1.11
PTPRM-205ENST00000577827 TNCP24821 2201 aa8.11□□□□□ -1.11
PTPRM-205ENST00000577827 MED12LQ86YW9 2145 aa8.11□□□□□ -1.11
PTPRM-205ENST00000577827 PCDH15Q96QU1 1955 aa8.11□□□□□ -1.11
PTPRM-205ENST00000577827 E7EUB6 86 aa8.1□□□□□ -1.11
PTPRM-205ENST00000577827 GATA1P15976 413 aaPredicted RBP8.1□□□□□ -1.11
PTPRM-205ENST00000577827 RBX1P62877 108 aa8.1□□□□□ -1.11
PTPRM-205ENST00000577827 BRD3OSQ6XYD6 125 aa8.1□□□□□ -1.11
PTPRM-205ENST00000577827 ATP6V0E2Q8NHE4 81 aa8.1□□□□□ -1.11
PTPRM-205ENST00000577827 BPESC1Q9GZL8 116 aa8.1□□□□□ -1.11
PTPRM-205ENST00000577827 IGHV3-73A0A0B4J1V6 119 aa8.1□□□□□ -1.11
PTPRM-205ENST00000577827 GAGE5Q13069 117 aa8.1□□□□□ -1.11
PTPRM-205ENST00000577827 GAGE6Q13070 117 aa8.1□□□□□ -1.11
PTPRM-205ENST00000577827 WFDC2Q14508 124 aa8.1□□□□□ -1.11
PTPRM-205ENST00000577827 MSRB1Q9NZV6 116 aa8.1□□□□□ -1.11
PTPRM-205ENST00000577827 SPANXCQ9NY87 97 aa8.1□□□□□ -1.11
PTPRM-205ENST00000577827 PCNX2A6NKB5 2137 aa8.1□□□□□ -1.11
PTPRM-205ENST00000577827 C10orf142B7Z368 130 aa8.1□□□□□ -1.11
PTPRM-205ENST00000577827 CTSGP08311 255 aa8.1□□□□□ -1.11
PTPRM-205ENST00000577827 PRSS33Q8NF86 280 aa8.1□□□□□ -1.11
PTPRM-205ENST00000577827 CHCHD5Q9BSY4 110 aa8.1□□□□□ -1.11
PTPRM-205ENST00000577827 NCKAP5O14513 1909 aa8.1□□□□□ -1.11
PTPRM-205ENST00000577827 CACNA1BQ00975 2339 aa8.09□□□□□ -1.11
PTPRM-205ENST00000577827 PIP4P2Q8N4L2 257 aa8.09□□□□□ -1.11
PTPRM-205ENST00000577827 NTN5Q8WTR8 489 aaPredicted RBP8.09□□□□□ -1.11
PTPRM-205ENST00000577827 C1orf159Q96HA4 380 aa8.09□□□□□ -1.11
PTPRM-205ENST00000577827 E9PLD3 99 aa8.09□□□□□ -1.11
PTPRM-205ENST00000577827 PAX4O43316 350 aa8.09□□□□□ -1.11
PTPRM-205ENST00000577827 BUB3O43684 328 aa8.09□□□□□ -1.11
PTPRM-205ENST00000577827 FOXE3Q13461 319 aa8.09□□□□□ -1.11
PTPRM-205ENST00000577827 C9orf153Q5TBE3 101 aa8.09□□□□□ -1.11
PTPRM-205ENST00000577827 C16orf54Q6UWD8 224 aa8.09□□□□□ -1.11
PTPRM-205ENST00000577827 IGHV1-69P01742 117 aa8.09□□□□□ -1.11
PTPRM-205ENST00000577827 IGHG4P01861 327 aa8.09□□□□□ -1.11
PTPRM-205ENST00000577827 PLA2G5P39877 138 aa8.09□□□□□ -1.11
PTPRM-205ENST00000577827 RITA1Q96K30 269 aa8.09□□□□□ -1.11
PTPRM-205ENST00000577827 MED13LQ71F56 2210 aa8.09□□□□□ -1.11
PTPRM-205ENST00000577827 LINC00322Q6ZN03 302 aaPredicted RBP8.09□□□□□ -1.12
PTPRM-205ENST00000577827 GATD1Q8NB37 220 aa8.09□□□□□ -1.12
PTPRM-205ENST00000577827 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP8.08□□□□□ -1.123e-7■■■□□ 18.6
PTPRM-205ENST00000577827 IGHV7-4-1A0A0J9YVY3 117 aa8.08□□□□□ -1.12
PTPRM-205ENST00000577827 MED14OSP0DP75 135 aa8.08□□□□□ -1.12
PTPRM-205ENST00000577827 TRGV1A0A0A0MS02 117 aa8.08□□□□□ -1.12
PTPRM-205ENST00000577827 FOXI1Q12951 378 aa8.08□□□□□ -1.12
PTPRM-205ENST00000577827 COL6A6A6NMZ7 2263 aa8.08□□□□□ -1.12
PTPRM-205ENST00000577827 GAGE2AQ6NT46 116 aa8.07□□□□□ -1.12
PTPRM-205ENST00000577827 MALP21145 153 aa8.07□□□□□ -1.12
PTPRM-205ENST00000577827 GATA3P23771 443 aa8.07□□□□□ -1.12
PTPRM-205ENST00000577827 C9orf47Q6ZRZ4 202 aa8.07□□□□□ -1.12
PTPRM-205ENST00000577827 ANKRD29Q8N6D5 301 aa8.07□□□□□ -1.12
PTPRM-205ENST00000577827 CARD19Q96LW7 228 aa8.07□□□□□ -1.12
PTPRM-205ENST00000577827 NUP210LQ5VU65 1888 aa8.07□□□□□ -1.12
PTPRM-205ENST00000577827 TRAV13-1A0A0B4J241 112 aa8.07□□□□□ -1.12
PTPRM-205ENST00000577827 ACYP1P07311 99 aa8.07□□□□□ -1.12
PTPRM-205ENST00000577827 MYCNOSP40205 109 aa8.07□□□□□ -1.12
PTPRM-205ENST00000577827 SPINK13Q1W4C9 94 aa8.07□□□□□ -1.12
PTPRM-205ENST00000577827 TOMM6Q96B49 74 aa8.07□□□□□ -1.12
PTPRM-205ENST00000577827 IGHV7-81A0A0B4J1V7 117 aa8.07□□□□□ -1.12
PTPRM-205ENST00000577827 DAZAP2Q15038 168 aaPredicted RBP8.07□□□□□ -1.12
PTPRM-205ENST00000577827 C15orf53Q8NAA6 179 aa8.07□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 71.9 ms