RNA–Protein interactions for RNA: ENST00000577716.5

RNF43-203, Transcript of ring finger protein 43, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RNF43, Length 4,367 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF43-203ENST00000577716 ATXN8Q156A1 80 aa8.57□□□□□ -1.04
RNF43-203ENST00000577716 LY6G5BQ8NDX9 201 aa8.57□□□□□ -1.04
RNF43-203ENST00000577716 A0A1W2PPM0 123 aa8.56□□□□□ -1.04
RNF43-203ENST00000577716 C9JAW5 83 aa8.56□□□□□ -1.04
RNF43-203ENST00000577716 CCL25O15444 150 aa8.56□□□□□ -1.04
RNF43-203ENST00000577716 GATA1P15976 413 aaPredicted RBP8.56□□□□□ -1.04
RNF43-203ENST00000577716 NDUFA4O00483 81 aa8.56□□□□□ -1.04
RNF43-203ENST00000577716 IGHV3-53P01767 116 aa8.56□□□□□ -1.04
RNF43-203ENST00000577716 MSMBP08118 114 aa8.56□□□□□ -1.04
RNF43-203ENST00000577716 PMVKQ15126 192 aa8.56□□□□□ -1.04
RNF43-203ENST00000577716 ANKRD39Q53RE8 183 aa8.56□□□□□ -1.04
RNF43-203ENST00000577716 MSRB1Q9NZV6 116 aa8.56□□□□□ -1.04
RNF43-203ENST00000577716 HTN3P15516 51 aa8.56□□□□□ -1.04
RNF43-203ENST00000577716 TRPT1Q86TN4 253 aaKnown RBP8.56□□□□□ -1.04
RNF43-203ENST00000577716 ZNF503Q96F45 646 aa8.56□□□□□ -1.04
RNF43-203ENST00000577716 KLF12Q9Y4X4 402 aa8.56□□□□□ -1.04
RNF43-203ENST00000577716 CEP295Q9C0D2 2601 aa8.56□□□□□ -1.04
RNF43-203ENST00000577716 KIAA1549Q9HCM3 1950 aa8.55□□□□□ -1.04
RNF43-203ENST00000577716 MYMXA0A1B0GTQ4 84 aa8.55□□□□□ -1.04
RNF43-203ENST00000577716 K7ERJ3 54 aa8.55□□□□□ -1.04
RNF43-203ENST00000577716 UTF1Q5T230 341 aa8.55□□□□□ -1.04
RNF43-203ENST00000577716 UBE2E2Q96LR5 201 aa8.55□□□□□ -1.04
RNF43-203ENST00000577716 BRCA2P51587 3418 aa8.55□□□□□ -1.04
RNF43-203ENST00000577716 RBMY1BA6NDE4 496 aaKnown RBP8.55□□□□□ -1.04
RNF43-203ENST00000577716 RBMY1EA6NEQ0 496 aaKnown RBP8.55□□□□□ -1.04
RNF43-203ENST00000577716 RBMY1DP0C7P1 496 aaKnown RBP8.55□□□□□ -1.04
RNF43-203ENST00000577716 RBMY1A1P0DJD3 496 aaKnown RBP8.55□□□□□ -1.04
RNF43-203ENST00000577716 RBMY1CP0DJD4 496 aa8.55□□□□□ -1.04
RNF43-203ENST00000577716 HLA-DRB4P13762 266 aa8.55□□□□□ -1.04
RNF43-203ENST00000577716 FOXE3Q13461 319 aa8.55□□□□□ -1.04
RNF43-203ENST00000577716 C2orf82Q6UX34 121 aa8.55□□□□□ -1.04
RNF43-203ENST00000577716 HLA-DRB4X5D2U9 266 aa8.55□□□□□ -1.04
RNF43-203ENST00000577716 CGB3P0DN86 165 aa8.55□□□□□ -1.04
RNF43-203ENST00000577716 CGB7P0DN87 165 aa8.55□□□□□ -1.04
RNF43-203ENST00000577716 KLK9Q9UKQ9 250 aa8.55□□□□□ -1.04
RNF43-203ENST00000577716 PRRC2CQ9Y520 2896 aaKnown RBP8.55□□□□□ -1.04
RNF43-203ENST00000577716 LINC00158P58513 81 aa8.54□□□□□ -1.04
RNF43-203ENST00000577716 LINC01545Q5VT33 79 aa8.54□□□□□ -1.04
RNF43-203ENST00000577716 OR11H6Q8NGC7 330 aa8.54□□□□□ -1.04
RNF43-203ENST00000577716 YPEL4Q96NS1 127 aa8.54□□□□□ -1.04
RNF43-203ENST00000577716 TRAV13-1A0A0B4J241 112 aa8.54□□□□□ -1.04
RNF43-203ENST00000577716 INS-IGF2F8WCM5 200 aa8.54□□□□□ -1.04
RNF43-203ENST00000577716 SIVA1O15304 175 aa8.54□□□□□ -1.04
RNF43-203ENST00000577716 IGLV1-47P01700 117 aa8.54□□□□□ -1.04
RNF43-203ENST00000577716 CKS1BP61024 79 aa8.54□□□□□ -1.04
RNF43-203ENST00000577716 ZFAND6Q6FIF0 208 aa8.54□□□□□ -1.04
RNF43-203ENST00000577716 CFAP161Q6P656 301 aa8.54□□□□□ -1.04
RNF43-203ENST00000577716 AMTNQ6UX39 209 aa8.54□□□□□ -1.04
RNF43-203ENST00000577716 TRAV12-2A0A075B6T6 113 aa8.54□□□□□ -1.04
RNF43-203ENST00000577716 SPRY2O43597 315 aa8.54□□□□□ -1.04
RNF43-203ENST00000577716 CFHR4Q92496 578 aa8.54□□□□□ -1.04
RNF43-203ENST00000577716 PRO3102Q9H379 93 aa8.54□□□□□ -1.04
RNF43-203ENST00000577716 LAMA2P24043 3122 aaKnown RBP8.54□□□□□ -1.04
RNF43-203ENST00000577716 NAV2Q8IVL1 2488 aa8.54□□□□□ -1.04
RNF43-203ENST00000577716 F6UB75 175 aa8.54□□□□□ -1.04
RNF43-203ENST00000577716 H3BMG7 143 aa8.54□□□□□ -1.04
RNF43-203ENST00000577716 IGLV2-23P01705 113 aa8.54□□□□□ -1.04
RNF43-203ENST00000577716 C1orf122Q6ZSJ8 110 aa8.54□□□□□ -1.04
RNF43-203ENST00000577716 TSSC4Q9Y5U2 329 aaPredicted RBP8.54□□□□□ -1.04
RNF43-203ENST00000577716 ABCA2Q9BZC7 2435 aa8.53□□□□□ -1.04
RNF43-203ENST00000577716 IGLV11-55A0A075B6I3 123 aa8.53□□□□□ -1.04
RNF43-203ENST00000577716 TNRC6AQ8NDV7 1962 aaKnown RBP8.53□□□□□ -1.04
RNF43-203ENST00000577716 SPINK8P0C7L1 97 aa8.53□□□□□ -1.04
RNF43-203ENST00000577716 CEND1Q8N111 149 aa8.53□□□□□ -1.04
RNF43-203ENST00000577716 KLHL30-AS1Q8NEE0 82 aa8.53□□□□□ -1.04
RNF43-203ENST00000577716 IGHV7-81A0A0B4J1V7 117 aa8.53□□□□□ -1.04
RNF43-203ENST00000577716 CTSGP08311 255 aa8.53□□□□□ -1.04
RNF43-203ENST00000577716 PRIMA1Q86XR5 153 aa8.53□□□□□ -1.04
RNF43-203ENST00000577716 RASL10AQ92737 203 aa8.53□□□□□ -1.04
RNF43-203ENST00000577716 ZNF625Q96I27 306 aaPredicted RBP8.53□□□□□ -1.04
RNF43-203ENST00000577716 IGHV1OR15-1A0A075B7D0 117 aa8.52□□□□□ -1.04
RNF43-203ENST00000577716 A0A087WX48 190 aa8.52□□□□□ -1.04
RNF43-203ENST00000577716 TEX22C9J3V5 150 aa8.52□□□□□ -1.04
RNF43-203ENST00000577716 TMEM141Q96I45 108 aa8.52□□□□□ -1.04
RNF43-203ENST00000577716 C20orf78Q9BR46 151 aa8.52□□□□□ -1.05
RNF43-203ENST00000577716 NUP210LQ5VU65 1888 aa8.52□□□□□ -1.05
RNF43-203ENST00000577716 INSP01308 110 aa8.52□□□□□ -1.05
RNF43-203ENST00000577716 MAPK1IP1LQ8NDC0 245 aa8.52□□□□□ -1.05
RNF43-203ENST00000577716 IGLV2-8P01709 118 aa8.52□□□□□ -1.05
RNF43-203ENST00000577716 TRBV25-1A0A075B6N4 114 aa8.51□□□□□ -1.05
RNF43-203ENST00000577716 IGKV1D-37A0A075B6S9 117 aa8.51□□□□□ -1.05
RNF43-203ENST00000577716 TRAV8-3A0A0A6YYJ7 113 aa8.51□□□□□ -1.05
RNF43-203ENST00000577716 F8W1H4 67 aa8.51□□□□□ -1.05
RNF43-203ENST00000577716 SAP30O75446 220 aa8.51□□□□□ -1.05
RNF43-203ENST00000577716 CDKN1BP46527 198 aa8.51□□□□□ -1.05
RNF43-203ENST00000577716 TAL2Q16559 108 aa8.51□□□□□ -1.05
RNF43-203ENST00000577716 TLN2Q9Y4G6 2542 aa8.51□□□□□ -1.05
RNF43-203ENST00000577716 TRBV20-1A0A075B6N2 111 aa8.51□□□□□ -1.05
RNF43-203ENST00000577716 PRSS29PA6NIE9 313 aa8.51□□□□□ -1.05
RNF43-203ENST00000577716 CRYGCP07315 174 aa8.51□□□□□ -1.05
RNF43-203ENST00000577716 TMEM86BQ8N661 226 aa8.51□□□□□ -1.05
RNF43-203ENST00000577716 HIVEP3Q5T1R4 2406 aa8.51□□□□□ -1.05
RNF43-203ENST00000577716 PAX4O43316 350 aa8.51□□□□□ -1.05
RNF43-203ENST00000577716 GNRH2O43555 120 aa8.51□□□□□ -1.05
RNF43-203ENST00000577716 C1orf229Q6ZS94 237 aaPredicted RBP8.51□□□□□ -1.05
RNF43-203ENST00000577716 CEP192Q8TEP8 1941 aa8.5□□□□□ -1.05
RNF43-203ENST00000577716 CENPVL3A0A0U1RRI6 287 aa8.5□□□□□ -1.05
RNF43-203ENST00000577716 HOXB4P17483 251 aaPredicted RBP8.5□□□□□ -1.05
RNF43-203ENST00000577716 MALP21145 153 aa8.5□□□□□ -1.05
RNF43-203ENST00000577716 EIF4EBP1Q13541 118 aaPredicted RBP8.5□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 68.8 ms