RNA–Protein interactions for RNA: ENST00000577536.1

CDH8-204, Transcript of cadherin 8, humanhuman

TSL 3

Gene CDH8, Length 324 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH8-204ENST00000577536 CDK12Q9NYV4 1490 aaPredicted RBP-0.75□□□□□ -2.53
CDH8-204ENST00000577536 NISCHQ9Y2I1 1504 aa-0.75□□□□□ -2.53
CDH8-204ENST00000577536 SPTBN4Q9H254 2564 aa-0.76□□□□□ -2.53
CDH8-204ENST00000577536 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP-0.76□□□□□ -2.53
CDH8-204ENST00000577536 TRBV7-1A0A0A6YYK4 115 aa-0.76□□□□□ -2.53
CDH8-204ENST00000577536 TRBV10-1A0A0K0K1A3 114 aa-0.76□□□□□ -2.53
CDH8-204ENST00000577536 LOC107984640A0A0U1RRK4 108 aa-0.76□□□□□ -2.53
CDH8-204ENST00000577536 TMEM189A5PLL7 270 aa-0.76□□□□□ -2.53
CDH8-204ENST00000577536 IFITM5A6NNB3 132 aa-0.76□□□□□ -2.53
CDH8-204ENST00000577536 PDE6DO43924 150 aa-0.76□□□□□ -2.53
CDH8-204ENST00000577536 SERPINA1P01009 418 aa-0.76□□□□□ -2.53
CDH8-204ENST00000577536 IFNA5P01569 189 aa-0.76□□□□□ -2.53
CDH8-204ENST00000577536 IGKCP01834 107 aa-0.76□□□□□ -2.53
CDH8-204ENST00000577536 CRHP06850 196 aa-0.76□□□□□ -2.53
CDH8-204ENST00000577536 SERPINA6P08185 405 aa-0.76□□□□□ -2.53
CDH8-204ENST00000577536 BCL2P10415 239 aa-0.76□□□□□ -2.53
CDH8-204ENST00000577536 IL7P13232 177 aa-0.76□□□□□ -2.53
CDH8-204ENST00000577536 ACYP2P14621 99 aa-0.76□□□□□ -2.53
CDH8-204ENST00000577536 FABP4P15090 132 aa-0.76□□□□□ -2.53
CDH8-204ENST00000577536 SPRR1BP22528 89 aa-0.76□□□□□ -2.53
CDH8-204ENST00000577536 NFYBP25208 207 aa-0.76□□□□□ -2.53
CDH8-204ENST00000577536 ERP29P30040 261 aaKnown RBP-0.76□□□□□ -2.53
CDH8-204ENST00000577536 NDUFA6P56556 154 aa-0.76□□□□□ -2.53
CDH8-204ENST00000577536 IQCJQ1A5X6 159 aa-0.76□□□□□ -2.53
CDH8-204ENST00000577536 UNQ5815/PRO19632Q6UWF5 114 aa-0.76□□□□□ -2.53
CDH8-204ENST00000577536 PHF5AQ7RTV0 110 aaKnown RBP-0.76□□□□□ -2.53
CDH8-204ENST00000577536 OR5A2Q8NGI9 324 aa-0.76□□□□□ -2.53
CDH8-204ENST00000577536 SLC22A13Q9Y226 551 aa-0.76□□□□□ -2.53
CDH8-204ENST00000577536 MPC1Q9Y5U8 109 aa-0.76□□□□□ -2.53
CDH8-204ENST00000577536 MAP3K5Q99683 1374 aa-0.76□□□□□ -2.53
CDH8-204ENST00000577536 FGD6Q6ZV73 1430 aa-0.76□□□□□ -2.53
CDH8-204ENST00000577536 TRPM1Q7Z4N2 1603 aa-0.76□□□□□ -2.53
CDH8-204ENST00000577536 PKD1P98161 4303 aa-0.76□□□□□ -2.53
CDH8-204ENST00000577536 VPS13DQ5THJ4 4388 aa-0.77□□□□□ -2.53
CDH8-204ENST00000577536 NUP210LQ5VU65 1888 aa-0.77□□□□□ -2.53
CDH8-204ENST00000577536 BICRAQ9NZM4 1560 aa-0.77□□□□□ -2.53
CDH8-204ENST00000577536 KIAA1107Q9UPP5 1409 aa-0.77□□□□□ -2.53
CDH8-204ENST00000577536 TRGV1A0A0A0MS02 117 aa-0.77□□□□□ -2.53
CDH8-204ENST00000577536 CLDN24A6NM45 220 aa-0.77□□□□□ -2.53
CDH8-204ENST00000577536 G3V318 75 aa-0.77□□□□□ -2.53
CDH8-204ENST00000577536 K7ERJ3 54 aa-0.77□□□□□ -2.53
CDH8-204ENST00000577536 M0R2P5 195 aa-0.77□□□□□ -2.53
CDH8-204ENST00000577536 OR2H2O95918 312 aa-0.77□□□□□ -2.53
CDH8-204ENST00000577536 IFNA14P01570 189 aa-0.77□□□□□ -2.53
CDH8-204ENST00000577536 MT1AP04731 61 aa-0.77□□□□□ -2.53
CDH8-204ENST00000577536 IFNA16P05015 189 aa-0.77□□□□□ -2.53
CDH8-204ENST00000577536 CXCL1P09341 107 aa-0.77□□□□□ -2.53
CDH8-204ENST00000577536 COX6B1P14854 86 aa-0.77□□□□□ -2.53
CDH8-204ENST00000577536 S100A3P33764 101 aa-0.77□□□□□ -2.53
CDH8-204ENST00000577536 HIST1H3AP68431 136 aa-0.77□□□□□ -2.53
CDH8-204ENST00000577536 SLC48A1Q6P1K1 146 aa-0.77□□□□□ -2.53
CDH8-204ENST00000577536 CLDN22Q8N7P3 220 aa-0.77□□□□□ -2.53
CDH8-204ENST00000577536 AP3S1Q92572 193 aa-0.77□□□□□ -2.53
CDH8-204ENST00000577536 MCEEQ96PE7 176 aa-0.77□□□□□ -2.53
CDH8-204ENST00000577536 VPS25Q9BRG1 176 aa-0.77□□□□□ -2.53
CDH8-204ENST00000577536 TRIM4Q9C037 500 aa-0.77□□□□□ -2.53
CDH8-204ENST00000577536 OR2H1Q9GZK4 316 aa-0.77□□□□□ -2.53
CDH8-204ENST00000577536 TP53AIP1Q9HCN2 124 aa-0.77□□□□□ -2.53
CDH8-204ENST00000577536 NKIRAS1Q9NYS0 192 aa-0.77□□□□□ -2.53
CDH8-204ENST00000577536 TANC2Q9HCD6 1990 aa-0.77□□□□□ -2.53
CDH8-204ENST00000577536 FAT3Q8TDW7 4589 aa-0.77□□□□□ -2.53
CDH8-204ENST00000577536 AKAP11Q9UKA4 1901 aa-0.77□□□□□ -2.53
CDH8-204ENST00000577536 NIPBLQ6KC79 2804 aaeCLIP-0.78□□□□□ -2.53
CDH8-204ENST00000577536 FRMPD1Q5SYB0 1578 aa-0.78□□□□□ -2.53
CDH8-204ENST00000577536 RTL9Q8NET4 1388 aa-0.78□□□□□ -2.53
CDH8-204ENST00000577536 A0A087WUJ7 227 aa-0.78□□□□□ -2.53
CDH8-204ENST00000577536 FXYD6-FXYD2A0A087WZ82 144 aa-0.78□□□□□ -2.53
CDH8-204ENST00000577536 TRBV6-1A0A0K0K1D8 114 aa-0.78□□□□□ -2.53
CDH8-204ENST00000577536 C5orf58C9J3I9 102 aa-0.78□□□□□ -2.53
CDH8-204ENST00000577536 DEGS1O15121 323 aa-0.78□□□□□ -2.53
CDH8-204ENST00000577536 NPFFO15130 113 aa-0.78□□□□□ -2.53
CDH8-204ENST00000577536 BCE1O60756 84 aa-0.78□□□□□ -2.53
CDH8-204ENST00000577536 IFNA21P01568 189 aa-0.78□□□□□ -2.53
CDH8-204ENST00000577536 GTF2A1P52655 376 aaPredicted RBP-0.78□□□□□ -2.53
CDH8-204ENST00000577536 MAGOHP61326 146 aaKnown RBP-0.78□□□□□ -2.53
CDH8-204ENST00000577536 HBBP68871 147 aa-0.78□□□□□ -2.53
CDH8-204ENST00000577536 SSBP1Q04837 148 aaKnown RBP-0.78□□□□□ -2.53
CDH8-204ENST00000577536 FADDQ13158 208 aa-0.78□□□□□ -2.53
CDH8-204ENST00000577536 POU6F1Q14863 301 aa-0.78□□□□□ -2.53
CDH8-204ENST00000577536 OR8B8Q15620 311 aa-0.78□□□□□ -2.53
CDH8-204ENST00000577536 MSMO1Q15800 293 aa-0.78□□□□□ -2.53
CDH8-204ENST00000577536 DEFB135Q30KP9 77 aa-0.78□□□□□ -2.53
CDH8-204ENST00000577536 C4orf33Q8N1A6 199 aa-0.78□□□□□ -2.53
CDH8-204ENST00000577536 OR4S1Q8NGB4 309 aa-0.78□□□□□ -2.53
CDH8-204ENST00000577536 DIRC1Q969H9 104 aa-0.78□□□□□ -2.53
CDH8-204ENST00000577536 PBDC1Q9BVG4 233 aa-0.78□□□□□ -2.53
CDH8-204ENST00000577536 V9GYV3 84 aa-0.78□□□□□ -2.53
CDH8-204ENST00000577536 PLXNA2O75051 1894 aa-0.78□□□□□ -2.53
CDH8-204ENST00000577536 TEP1Q99973 2627 aaKnown RBP-0.78□□□□□ -2.53
CDH8-204ENST00000577536 TSC2P49815 1807 aa-0.78□□□□□ -2.53
CDH8-204ENST00000577536 NCAPD3P42695 1498 aa-0.79□□□□□ -2.54
CDH8-204ENST00000577536 GOLGA3Q08378 1498 aa-0.79□□□□□ -2.54
CDH8-204ENST00000577536 AKAP9Q99996 3911 aa-0.79□□□□□ -2.54
CDH8-204ENST00000577536 TCRBV3S1A0A5B6 114 aa-0.79□□□□□ -2.54
CDH8-204ENST00000577536 FAM25EA8MYX2 175 aa-0.79□□□□□ -2.54
CDH8-204ENST00000577536 I3L2K1 104 aa-0.79□□□□□ -2.54
CDH8-204ENST00000577536 CDC42EP2O14613 210 aa-0.79□□□□□ -2.54
CDH8-204ENST00000577536 MFSD11O43934 449 aa-0.79□□□□□ -2.54
CDH8-204ENST00000577536 EDF1O60869 148 aaKnown RBP-0.79□□□□□ -2.54
CDH8-204ENST00000577536 MT-ND6P03923 174 aa-0.79□□□□□ -2.54
Retrieved 100 of 20,778 RNA–protein pairs in 78.7 ms