RNA–Protein interactions for RNA: ENST00000576708.5

NUP88-212, Transcript of nucleoporin 88, humanhuman

TSL 5

Gene NUP88, Length 800 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP88-212ENST00000576708 NRARPQ7Z6K4 114 aa4.3□□□□□ -1.72
NUP88-212ENST00000576708 BPIFA4PQ86YQ2 179 aa4.3□□□□□ -1.72
NUP88-212ENST00000576708 OR10J6PQ8NGY7 276 aa4.3□□□□□ -1.72
NUP88-212ENST00000576708 TMEM263Q8WUH6 116 aaKnown RBP4.3□□□□□ -1.72
NUP88-212ENST00000576708 SLC50A1Q9BRV3 221 aa4.3□□□□□ -1.72
NUP88-212ENST00000576708 C20orf85Q9H1P6 137 aa4.3□□□□□ -1.72
NUP88-212ENST00000576708 C11orf1Q9H5F2 150 aa4.3□□□□□ -1.72
NUP88-212ENST00000576708 DNAJC4Q9NNZ3 241 aa4.3□□□□□ -1.72
NUP88-212ENST00000576708 ZNF586Q9NXT0 402 aa4.3□□□□□ -1.72
NUP88-212ENST00000576708 IGSF23A1L1A6 192 aa4.29□□□□□ -1.72
NUP88-212ENST00000576708 USP17L23D6RBM5 183 aa4.29□□□□□ -1.72
NUP88-212ENST00000576708 M0QXV9 152 aa4.29□□□□□ -1.72
NUP88-212ENST00000576708 NBEAP1P0C6P0 100 aa4.29□□□□□ -1.72
NUP88-212ENST00000576708 CXCL2P19875 107 aa4.29□□□□□ -1.72
NUP88-212ENST00000576708 FUSP35637 526 aaKnown RBP eCLIP4.29□□□□□ -1.72
NUP88-212ENST00000576708 CAV2P51636 162 aa4.29□□□□□ -1.72
NUP88-212ENST00000576708 MRPL23Q16540 153 aaKnown RBP4.29□□□□□ -1.72
NUP88-212ENST00000576708 SERTAD4-AS1Q5TG53 156 aa4.29□□□□□ -1.72
NUP88-212ENST00000576708 Q6ZQT7 251 aa4.29□□□□□ -1.72
NUP88-212ENST00000576708 ZNF493Q6ZR52 646 aa4.29□□□□□ -1.72
NUP88-212ENST00000576708 Q6ZTI0 123 aa4.29□□□□□ -1.72
NUP88-212ENST00000576708 SPATA12Q7Z6I5 190 aa4.29□□□□□ -1.72
NUP88-212ENST00000576708 S100A7AQ86SG5 101 aa4.29□□□□□ -1.72
NUP88-212ENST00000576708 LINC00612Q8N6U2 182 aa4.29□□□□□ -1.72
NUP88-212ENST00000576708 Q8N9P0 234 aaPredicted RBP4.29□□□□□ -1.72
NUP88-212ENST00000576708 RXFP4Q8TDU9 374 aa4.29□□□□□ -1.72
NUP88-212ENST00000576708 ZNF431Q8TF32 576 aaPredicted RBP4.29□□□□□ -1.72
NUP88-212ENST00000576708 GNPNAT1Q96EK6 184 aaPredicted RBP4.29□□□□□ -1.72
NUP88-212ENST00000576708 GGACTQ9BVM4 153 aa4.29□□□□□ -1.72
NUP88-212ENST00000576708 Q9H8V8 135 aa4.29□□□□□ -1.72
NUP88-212ENST00000576708 WDR83OSQ9Y284 106 aa4.29□□□□□ -1.72
NUP88-212ENST00000576708 PXMP4Q9Y6I8 212 aa4.29□□□□□ -1.72
NUP88-212ENST00000576708 UBE2L5PA0A1B0GUS4 154 aa4.28□□□□□ -1.72
NUP88-212ENST00000576708 SNURFLB1AK76 121 aa4.28□□□□□ -1.72
NUP88-212ENST00000576708 SIVA1O15304 175 aa4.28□□□□□ -1.72
NUP88-212ENST00000576708 LYRM1O43325 122 aa4.28□□□□□ -1.72
NUP88-212ENST00000576708 NDUFB4O95168 129 aa4.28□□□□□ -1.72
NUP88-212ENST00000576708 PPBPP02775 128 aa4.28□□□□□ -1.72
NUP88-212ENST00000576708 RLN2P04090 185 aa4.28□□□□□ -1.72
NUP88-212ENST00000576708 TCRBP04435 133 aa4.28□□□□□ -1.72
NUP88-212ENST00000576708 PYYP10082 97 aa4.28□□□□□ -1.72
NUP88-212ENST00000576708 LEPP41159 167 aa4.28□□□□□ -1.72
NUP88-212ENST00000576708 S100A10P60903 97 aa4.28□□□□□ -1.72
NUP88-212ENST00000576708 BAXQ07812 192 aa4.28□□□□□ -1.72
NUP88-212ENST00000576708 CD300CQ08708 224 aa4.28□□□□□ -1.72
NUP88-212ENST00000576708 BTN1A1Q13410 526 aa4.28□□□□□ -1.72
NUP88-212ENST00000576708 ZNF846Q147U1 533 aa4.28□□□□□ -1.72
NUP88-212ENST00000576708 GCSAMLQ5JQS6 135 aa4.28□□□□□ -1.72
NUP88-212ENST00000576708 Q6ZRG5 221 aa4.28□□□□□ -1.72
NUP88-212ENST00000576708 EXOC3-AS1Q8N2X6 119 aa4.28□□□□□ -1.72
NUP88-212ENST00000576708 MAPKAPK5-AS1Q8N8E1 139 aa4.28□□□□□ -1.72
NUP88-212ENST00000576708 OR1L4Q8NGR5 311 aa4.28□□□□□ -1.72
NUP88-212ENST00000576708 BLNKQ8WV28 456 aa4.28□□□□□ -1.72
NUP88-212ENST00000576708 VSIG2Q96IQ7 327 aa4.28□□□□□ -1.72
NUP88-212ENST00000576708 C2orf50Q96LR7 162 aa4.28□□□□□ -1.72
NUP88-212ENST00000576708 C12orf57Q99622 126 aa4.28□□□□□ -1.72
NUP88-212ENST00000576708 C20orf144Q9BQM9 153 aa4.28□□□□□ -1.72
NUP88-212ENST00000576708 AGPAT4-IT1Q9H0P7 198 aa4.28□□□□□ -1.72
NUP88-212ENST00000576708 GSN-AS1Q9NRJ2 163 aa4.28□□□□□ -1.72
NUP88-212ENST00000576708 SLC39A9Q9NUM3 307 aa4.28□□□□□ -1.72
NUP88-212ENST00000576708 UQCC1Q9NVA1 299 aa4.28□□□□□ -1.72
NUP88-212ENST00000576708 TP53TG3Q9ULZ0 132 aa4.28□□□□□ -1.72
NUP88-212ENST00000576708 KLF12Q9Y4X4 402 aa4.28□□□□□ -1.72
NUP88-212ENST00000576708 MUC4Q99102 2169 aa4.28□□□□□ -1.72
NUP88-212ENST00000576708 TRBV19A0A075B6N1 114 aa4.27□□□□□ -1.73
NUP88-212ENST00000576708 IGKV2-40A0A087WW87 121 aaPredicted RBP4.27□□□□□ -1.73
NUP88-212ENST00000576708 TRGV1A0A0A0MS02 117 aa4.27□□□□□ -1.73
NUP88-212ENST00000576708 TRBV7-9A0A0J9YWB2 115 aa4.27□□□□□ -1.73
NUP88-212ENST00000576708 PRAF2O60831 178 aa4.27□□□□□ -1.73
NUP88-212ENST00000576708 IFNA5P01569 189 aa4.27□□□□□ -1.73
NUP88-212ENST00000576708 IGKV2D-40P01614 121 aaPredicted RBP4.27□□□□□ -1.73
NUP88-212ENST00000576708 IGHV3-53P01767 116 aa4.27□□□□□ -1.73
NUP88-212ENST00000576708 FGF7P21781 194 aa4.27□□□□□ -1.73
NUP88-212ENST00000576708 RNASE4P34096 147 aaKnown RBP4.27□□□□□ -1.73
NUP88-212ENST00000576708 RPL29P47914 159 aaKnown RBP4.27□□□□□ -1.73
NUP88-212ENST00000576708 FGF8P55075 233 aaPredicted RBP4.27□□□□□ -1.73
NUP88-212ENST00000576708 IL15RAQ13261 267 aa4.27□□□□□ -1.73
NUP88-212ENST00000576708 RAB31Q13636 194 aa4.27□□□□□ -1.73
NUP88-212ENST00000576708 PRR9Q5T870 116 aa4.27□□□□□ -1.73
NUP88-212ENST00000576708 C9orf47Q6ZRZ4 202 aa4.27□□□□□ -1.73
NUP88-212ENST00000576708 MIR17HGQ75NE6 70 aa4.27□□□□□ -1.73
NUP88-212ENST00000576708 C12orf45Q8N5I9 185 aaPredicted RBP4.27□□□□□ -1.73
NUP88-212ENST00000576708 TMEM252Q8N6L7 170 aa4.27□□□□□ -1.73
NUP88-212ENST00000576708 PRR26Q8N8Z3 221 aa4.27□□□□□ -1.73
NUP88-212ENST00000576708 C11orf72Q8NBR9 251 aa4.27□□□□□ -1.73
NUP88-212ENST00000576708 FAM19A4Q96LR4 140 aa4.27□□□□□ -1.73
NUP88-212ENST00000576708 MAP1LC3CQ9BXW4 147 aa4.27□□□□□ -1.73
NUP88-212ENST00000576708 MRPS16Q9Y3D3 137 aaKnown RBP4.27□□□□□ -1.73
NUP88-212ENST00000576708 TRGV2A0A075B6R0 118 aa4.26□□□□□ -1.73
NUP88-212ENST00000576708 A0A096LPF7 62 aa4.26□□□□□ -1.73
NUP88-212ENST00000576708 A0A1B0GV90 55 aa4.26□□□□□ -1.73
NUP88-212ENST00000576708 C7orf71A4D174 169 aa4.26□□□□□ -1.73
NUP88-212ENST00000576708 KLLNB2CW77 178 aa4.26□□□□□ -1.73
NUP88-212ENST00000576708 TCAPO15273 167 aa4.26□□□□□ -1.73
NUP88-212ENST00000576708 ARPC5O15511 151 aa4.26□□□□□ -1.73
NUP88-212ENST00000576708 ZNF324O75467 553 aaPredicted RBP4.26□□□□□ -1.73
NUP88-212ENST00000576708 CDK2AP2O75956 126 aa4.26□□□□□ -1.73
NUP88-212ENST00000576708 SIX6O95475 246 aa4.26□□□□□ -1.73
NUP88-212ENST00000576708 SLC25A5P05141 298 aaKnown RBP4.26□□□□□ -1.73
NUP88-212ENST00000576708 HIST1H1EP10412 219 aaKnown RBP4.26□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 53.4 ms