RNA–Protein interactions for RNA: ENST00000576613.5

CTDNEP1-212, Transcript of CTD nuclear envelope phosphatase 1, humanhuman

TSL 3

Gene CTDNEP1, Length 606 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDNEP1-212ENST00000576613 ATP5SQ99766 215 aa7.73□□□□□ -1.17
CTDNEP1-212ENST00000576613 CIDEAO60543 219 aa7.72□□□□□ -1.17
CTDNEP1-212ENST00000576613 UBE2L3P68036 154 aaKnown RBP7.72□□□□□ -1.17
CTDNEP1-212ENST00000576613 SLC25A29Q8N8R3 303 aa7.72□□□□□ -1.17
CTDNEP1-212ENST00000576613 KCNS1Q96KK3 526 aa7.72□□□□□ -1.17
CTDNEP1-212ENST00000576613 SH3BGRL3Q9H299 93 aa7.72□□□□□ -1.17
CTDNEP1-212ENST00000576613 SDF2L1Q9HCN8 221 aa7.72□□□□□ -1.17
CTDNEP1-212ENST00000576613 TRAV8-3A0A0A6YYJ7 113 aa7.71□□□□□ -1.18
CTDNEP1-212ENST00000576613 TRAV21A0A0B4J279 112 aa7.71□□□□□ -1.18
CTDNEP1-212ENST00000576613 TRBV6-4A0A1B0GX49 114 aa7.71□□□□□ -1.18
CTDNEP1-212ENST00000576613 DIRC3C9JPN6 131 aa7.71□□□□□ -1.18
CTDNEP1-212ENST00000576613 GNRH2O43555 120 aa7.71□□□□□ -1.18
CTDNEP1-212ENST00000576613 OXTP01178 125 aa7.71□□□□□ -1.18
CTDNEP1-212ENST00000576613 IL7P13232 177 aa7.71□□□□□ -1.18
CTDNEP1-212ENST00000576613 SCXQ7RTU7 201 aa7.71□□□□□ -1.18
CTDNEP1-212ENST00000576613 OR5C1Q8NGR4 320 aa7.71□□□□□ -1.18
CTDNEP1-212ENST00000576613 PLA2G2DQ9UNK4 145 aa7.71□□□□□ -1.18
CTDNEP1-212ENST00000576613 DNAH8Q96JB1 4490 aa7.7□□□□□ -1.18
CTDNEP1-212ENST00000576613 IGLV2-33A0A075B6J2 118 aaPredicted RBP7.7□□□□□ -1.18
CTDNEP1-212ENST00000576613 TRAV6A0A075B6T7 132 aa7.7□□□□□ -1.18
CTDNEP1-212ENST00000576613 C17orf112F2Z3M2 114 aa7.7□□□□□ -1.18
CTDNEP1-212ENST00000576613 LECT2O14960 151 aa7.7□□□□□ -1.18
CTDNEP1-212ENST00000576613 TYMSP04818 313 aa7.7□□□□□ -1.18
CTDNEP1-212ENST00000576613 ASAH1Q13510 395 aa7.7□□□□□ -1.18
CTDNEP1-212ENST00000576613 WFDC2Q14508 124 aa7.7□□□□□ -1.18
CTDNEP1-212ENST00000576613 ZNF876PQ49A33 203 aa7.7□□□□□ -1.18
CTDNEP1-212ENST00000576613 KHDC3LQ587J8 217 aa7.7□□□□□ -1.18
CTDNEP1-212ENST00000576613 TOR2AQ5JU69 321 aa7.7□□□□□ -1.18
CTDNEP1-212ENST00000576613 FAM74A1Q5RGS3 127 aa7.7□□□□□ -1.18
CTDNEP1-212ENST00000576613 CMTM2Q8TAZ6 248 aa7.7□□□□□ -1.18
CTDNEP1-212ENST00000576613 ASB13Q8WXK3 278 aa7.7□□□□□ -1.18
CTDNEP1-212ENST00000576613 HYLS1Q96M11 299 aa7.7□□□□□ -1.18
CTDNEP1-212ENST00000576613 SDHCQ99643 169 aaPredicted RBP7.7□□□□□ -1.18
CTDNEP1-212ENST00000576613 SEC22CQ9BRL7 303 aa7.7□□□□□ -1.18
CTDNEP1-212ENST00000576613 GTSF1LQ9H1H1 148 aa7.7□□□□□ -1.18
CTDNEP1-212ENST00000576613 NUDT15Q9NV35 164 aa7.7□□□□□ -1.18
CTDNEP1-212ENST00000576613 COX11Q9Y6N1 276 aa7.7□□□□□ -1.18
CTDNEP1-212ENST00000576613 TCRBP04435 133 aa7.69□□□□□ -1.18
CTDNEP1-212ENST00000576613 TAS2R45P59539 299 aa7.69□□□□□ -1.18
CTDNEP1-212ENST00000576613 NHLH2Q02577 135 aa7.69□□□□□ -1.18
CTDNEP1-212ENST00000576613 IL15RAQ13261 267 aa7.69□□□□□ -1.18
CTDNEP1-212ENST00000576613 CFAP126Q5VTH2 177 aa7.69□□□□□ -1.18
CTDNEP1-212ENST00000576613 ATP6V0E2Q8NHE4 81 aa7.69□□□□□ -1.18
CTDNEP1-212ENST00000576613 WDR61Q9GZS3 305 aaKnown RBP7.69□□□□□ -1.18
CTDNEP1-212ENST00000576613 RPH3ALQ9UNE2 315 aa7.69□□□□□ -1.18
CTDNEP1-212ENST00000576613 LYRM1O43325 122 aa7.68□□□□□ -1.18
CTDNEP1-212ENST00000576613 MGST1P10620 155 aaKnown RBP7.68□□□□□ -1.18
CTDNEP1-212ENST00000576613 ACOT6Q3I5F7 207 aaPredicted RBP7.68□□□□□ -1.18
CTDNEP1-212ENST00000576613 CHAC1Q9BUX1 264 aa7.68□□□□□ -1.18
CTDNEP1-212ENST00000576613 NMES1Q9C002 83 aa7.68□□□□□ -1.18
CTDNEP1-212ENST00000576613 TREM1Q9NP99 234 aa7.68□□□□□ -1.18
CTDNEP1-212ENST00000576613 OTORQ9NRC9 128 aa7.68□□□□□ -1.18
CTDNEP1-212ENST00000576613 IGHV3-73A0A0B4J1V6 119 aa7.67□□□□□ -1.18
CTDNEP1-212ENST00000576613 RBFOX3A6NFN3 312 aa7.67□□□□□ -1.18
CTDNEP1-212ENST00000576613 GGTLC3B5MD39 225 aa7.67□□□□□ -1.18
CTDNEP1-212ENST00000576613 F6UZH7 168 aa7.67□□□□□ -1.18
CTDNEP1-212ENST00000576613 PLA2G10O15496 165 aa7.67□□□□□ -1.18
CTDNEP1-212ENST00000576613 RS1O15537 224 aa7.67□□□□□ -1.18
CTDNEP1-212ENST00000576613 LINC01620Q4KN68 170 aa7.67□□□□□ -1.18
CTDNEP1-212ENST00000576613 GOLT1AQ6ZVE7 132 aa7.67□□□□□ -1.18
CTDNEP1-212ENST00000576613 RMI2Q96E14 147 aa7.67□□□□□ -1.18
CTDNEP1-212ENST00000576613 HMCN2Q8NDA2 5059 aa7.67□□□□□ -1.18
CTDNEP1-212ENST00000576613 PGPA6NDG6 321 aa7.66□□□□□ -1.18
CTDNEP1-212ENST00000576613 ARL6IP6Q8N6S5 226 aa7.66□□□□□ -1.18
CTDNEP1-212ENST00000576613 Q8N976 141 aa7.66□□□□□ -1.18
CTDNEP1-212ENST00000576613 BAALCQ8WXS3 180 aa7.66□□□□□ -1.18
CTDNEP1-212ENST00000576613 NDFIP1Q9BT67 221 aa7.66□□□□□ -1.18
CTDNEP1-212ENST00000576613 RBM38Q9H0Z9 239 aaKnown RBP7.66□□□□□ -1.18
CTDNEP1-212ENST00000576613 UBR4Q5T4S7 5183 aa7.66□□□□□ -1.18
CTDNEP1-212ENST00000576613 LRP1Q07954 4544 aaKnown RBP7.65□□□□□ -1.18
CTDNEP1-212ENST00000576613 A0A087WWC5 75 aa7.65□□□□□ -1.18
CTDNEP1-212ENST00000576613 H2AFB2P0C5Z0 115 aa7.65□□□□□ -1.18
CTDNEP1-212ENST00000576613 SEC11BP0C7V7 166 aa7.65□□□□□ -1.18
CTDNEP1-212ENST00000576613 KRTAP10-4P60372 401 aaPredicted RBP7.65□□□□□ -1.18
CTDNEP1-212ENST00000576613 FFAR4Q5NUL3 377 aa7.65□□□□□ -1.18
CTDNEP1-212ENST00000576613 DPPA3Q6W0C5 159 aa7.65□□□□□ -1.18
CTDNEP1-212ENST00000576613 DAZ4Q86SG3 579 aaKnown RBP7.65□□□□□ -1.18
CTDNEP1-212ENST00000576613 Q8N3U1 123 aa7.65□□□□□ -1.18
CTDNEP1-212ENST00000576613 DAZ3Q9NR90 486 aaKnown RBP7.65□□□□□ -1.18
CTDNEP1-212ENST00000576613 MBD2Q9UBB5 411 aa7.65□□□□□ -1.18
CTDNEP1-212ENST00000576613 URGCP-MRPS24S4R325 110 aa7.65□□□□□ -1.18
CTDNEP1-212ENST00000576613 TRAV8-1A0A0A6YYK1 113 aa7.64□□□□□ -1.19
CTDNEP1-212ENST00000576613 TAAR5O14804 337 aa7.64□□□□□ -1.19
CTDNEP1-212ENST00000576613 IGLV2-8P01709 118 aa7.64□□□□□ -1.19
CTDNEP1-212ENST00000576613 ZNF506Q5JVG8 444 aa7.64□□□□□ -1.19
CTDNEP1-212ENST00000576613 CIRBP-AS1Q8TBR5 109 aa7.64□□□□□ -1.19
CTDNEP1-212ENST00000576613 PTH2Q96A98 100 aa7.64□□□□□ -1.19
CTDNEP1-212ENST00000576613 TVP23CQ96ET8 276 aa7.64□□□□□ -1.19
CTDNEP1-212ENST00000576613 C9orf85Q96MD7 179 aa7.64□□□□□ -1.19
CTDNEP1-212ENST00000576613 ZFP69Q49AA0 526 aa7.63□□□□□ -1.19
CTDNEP1-212ENST00000576613 LRRC37A5PQ49AS3 106 aa7.63□□□□□ -1.19
CTDNEP1-212ENST00000576613 PQLC2Q6ZP29 291 aa7.63□□□□□ -1.19
CTDNEP1-212ENST00000576613 SCGB1C1Q8TD33 95 aa7.63□□□□□ -1.19
CTDNEP1-212ENST00000576613 OR5AC2Q9NZP5 309 aa7.63□□□□□ -1.19
CTDNEP1-212ENST00000576613 IGKV2D-24A0A075B6R9 120 aa7.62□□□□□ -1.19
CTDNEP1-212ENST00000576613 FAM240BA0A1B0GVZ2 78 aa7.62□□□□□ -1.19
CTDNEP1-212ENST00000576613 SERTM2A0A1B0GWG4 89 aa7.62□□□□□ -1.19
CTDNEP1-212ENST00000576613 RNF222A6NCQ9 220 aa7.62□□□□□ -1.19
CTDNEP1-212ENST00000576613 GAGE12JA6NER3 117 aa7.62□□□□□ -1.19
CTDNEP1-212ENST00000576613 PGPEP1LA6NFU8 196 aa7.62□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms