RNA–Protein interactions for RNA: ENST00000576407.1

PRPF8-213, Transcript of pre-mRNA processing factor 8, humanhuman

TSL 2

Gene PRPF8, Length 566 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF8-213ENST00000576407 DEFB131AP59861 70 aa6.35□□□□□ -1.39
PRPF8-213ENST00000576407 PSG9Q00887 426 aa6.35□□□□□ -1.39
PRPF8-213ENST00000576407 PSMG4Q5JS54 123 aa6.35□□□□□ -1.39
PRPF8-213ENST00000576407 GTF2H5Q6ZYL4 71 aa6.35□□□□□ -1.39
PRPF8-213ENST00000576407 Q8N1Y9 231 aa6.35□□□□□ -1.39
PRPF8-213ENST00000576407 EXOC3-AS1Q8N2X6 119 aa6.35□□□□□ -1.39
PRPF8-213ENST00000576407 STPG4Q8N801 248 aa6.35□□□□□ -1.39
PRPF8-213ENST00000576407 OR10G8Q8NGN5 311 aa6.35□□□□□ -1.39
PRPF8-213ENST00000576407 C20orf173Q96LM9 149 aa6.35□□□□□ -1.39
PRPF8-213ENST00000576407 FAM110AQ9BQ89 295 aa6.35□□□□□ -1.39
PRPF8-213ENST00000576407 SAMD10Q9BYL1 202 aa6.35□□□□□ -1.39
PRPF8-213ENST00000576407 WFDC10AQ9H1F0 79 aa6.35□□□□□ -1.39
PRPF8-213ENST00000576407 ST20Q9HBF5 79 aa6.35□□□□□ -1.39
PRPF8-213ENST00000576407 C19orf73Q9NVV2 129 aa6.35□□□□□ -1.39
PRPF8-213ENST00000576407 PAM16Q9Y3D7 125 aa6.35□□□□□ -1.39
PRPF8-213ENST00000576407 ARL2-SNX15V9GYD0 113 aa6.35□□□□□ -1.39
PRPF8-213ENST00000576407 PRB2P02812 416 aaPredicted RBP6.34□□□□□ -1.39
PRPF8-213ENST00000576407 GPX1P07203 203 aa6.34□□□□□ -1.39
PRPF8-213ENST00000576407 CMC4P56277 68 aaPredicted RBP6.34□□□□□ -1.39
PRPF8-213ENST00000576407 BATFQ16520 125 aa6.34□□□□□ -1.39
PRPF8-213ENST00000576407 MAJINQ3KP22 176 aa6.34□□□□□ -1.39
PRPF8-213ENST00000576407 APRG1Q8IVJ8 170 aa6.34□□□□□ -1.39
PRPF8-213ENST00000576407 LYPD1Q8N2G4 141 aa6.34□□□□□ -1.39
PRPF8-213ENST00000576407 SSBP4Q9BWG4 385 aaPredicted RBP6.34□□□□□ -1.39
PRPF8-213ENST00000576407 PARLQ9H300 379 aa6.34□□□□□ -1.39
PRPF8-213ENST00000576407 Q9H3A6 140 aa6.34□□□□□ -1.39
PRPF8-213ENST00000576407 AAMDCQ9H7C9 122 aa6.34□□□□□ -1.39
PRPF8-213ENST00000576407 YTHDF2Q9Y5A9 579 aaKnown RBP6.34□□□□□ -1.39
PRPF8-213ENST00000576407 NOTCH1P46531 2555 aa6.34□□□□□ -1.39
PRPF8-213ENST00000576407 SORL1Q92673 2214 aa6.33□□□□□ -1.4
PRPF8-213ENST00000576407 TRAV9-2A0A087WT02 112 aa6.33□□□□□ -1.4
PRPF8-213ENST00000576407 A0A1W2PRE2 83 aa6.33□□□□□ -1.4
PRPF8-213ENST00000576407 PGPA6NDG6 321 aa6.33□□□□□ -1.4
PRPF8-213ENST00000576407 M0R3E3 92 aa6.33□□□□□ -1.4
PRPF8-213ENST00000576407 PRB4P10163 310 aaPredicted RBP6.33□□□□□ -1.4
PRPF8-213ENST00000576407 DEFB1P60022 68 aa6.33□□□□□ -1.4
PRPF8-213ENST00000576407 SEC11AP67812 179 aa6.33□□□□□ -1.4
PRPF8-213ENST00000576407 VAMP3Q15836 100 aa6.33□□□□□ -1.4
PRPF8-213ENST00000576407 RNF151Q2KHN1 245 aa6.33□□□□□ -1.4
PRPF8-213ENST00000576407 DEFB125Q8N687 156 aa6.33□□□□□ -1.4
PRPF8-213ENST00000576407 KCNS1Q96KK3 526 aa6.33□□□□□ -1.4
PRPF8-213ENST00000576407 OTORQ9NRC9 128 aa6.33□□□□□ -1.4
PRPF8-213ENST00000576407 CLEC5AQ9NY25 188 aa6.33□□□□□ -1.4
PRPF8-213ENST00000576407 KNCNA6PVL3 124 aa6.32□□□□□ -1.4
PRPF8-213ENST00000576407 GGTLC3B5MD39 225 aa6.32□□□□□ -1.4
PRPF8-213ENST00000576407 C9JCJ5 164 aa6.32□□□□□ -1.4
PRPF8-213ENST00000576407 PRAC2D3DTV9 90 aa6.32□□□□□ -1.4
PRPF8-213ENST00000576407 F6UB75 175 aa6.32□□□□□ -1.4
PRPF8-213ENST00000576407 PAGE4O60829 102 aa6.32□□□□□ -1.4
PRPF8-213ENST00000576407 HLA-DQA1P01909 254 aa6.32□□□□□ -1.4
PRPF8-213ENST00000576407 GDF5OSQ5U4N7 250 aa6.32□□□□□ -1.4
PRPF8-213ENST00000576407 CST9LP1Q5W188 147 aa6.32□□□□□ -1.4
PRPF8-213ENST00000576407 BAGE3Q86Y29 109 aa6.32□□□□□ -1.4
PRPF8-213ENST00000576407 BAGE2Q86Y30 109 aa6.32□□□□□ -1.4
PRPF8-213ENST00000576407 OR5A1Q8NGJ0 315 aa6.32□□□□□ -1.4
PRPF8-213ENST00000576407 BORCS7Q96B45 105 aa6.32□□□□□ -1.4
PRPF8-213ENST00000576407 MRPL53Q96EL3 112 aaKnown RBP6.32□□□□□ -1.4
PRPF8-213ENST00000576407 SPANXA1Q9NS26 97 aa6.32□□□□□ -1.4
PRPF8-213ENST00000576407 A0A0J9YX75 114 aa6.31□□□□□ -1.4
PRPF8-213ENST00000576407 J3QR89 54 aa6.31□□□□□ -1.4
PRPF8-213ENST00000576407 K7EIL1 84 aa6.31□□□□□ -1.4
PRPF8-213ENST00000576407 SLC25A5P05141 298 aaKnown RBP6.31□□□□□ -1.4
PRPF8-213ENST00000576407 IGHV4-30-4P0DP06 118 aa6.31□□□□□ -1.4
PRPF8-213ENST00000576407 CSN1S1P47710 185 aa6.31□□□□□ -1.4
PRPF8-213ENST00000576407 ATP5G3P48201 142 aa6.31□□□□□ -1.4
PRPF8-213ENST00000576407 EBLN2Q6P2I7 272 aa6.31□□□□□ -1.4
PRPF8-213ENST00000576407 FOXI2Q6ZQN5 318 aa6.31□□□□□ -1.4
PRPF8-213ENST00000576407 Q8N976 141 aa6.31□□□□□ -1.4
PRPF8-213ENST00000576407 C5orf17Q8NAS9 161 aa6.31□□□□□ -1.4
PRPF8-213ENST00000576407 OR8A1Q8NGG7 326 aa6.31□□□□□ -1.4
PRPF8-213ENST00000576407 SFRP2Q96HF1 295 aa6.31□□□□□ -1.4
PRPF8-213ENST00000576407 IL36BQ9NZH7 164 aa6.31□□□□□ -1.4
PRPF8-213ENST00000576407 IGKV2-40A0A087WW87 121 aaPredicted RBP6.3□□□□□ -1.4
PRPF8-213ENST00000576407 H3BMM0 161 aa6.3□□□□□ -1.4
PRPF8-213ENST00000576407 ZNF324O75467 553 aaPredicted RBP6.3□□□□□ -1.4
PRPF8-213ENST00000576407 SERF1AO75920 110 aa6.3□□□□□ -1.4
PRPF8-213ENST00000576407 IGKV2D-40P01614 121 aaPredicted RBP6.3□□□□□ -1.4
PRPF8-213ENST00000576407 HLA-DRB4P13762 266 aa6.3□□□□□ -1.4
PRPF8-213ENST00000576407 PMCHP20382 165 aa6.3□□□□□ -1.4
PRPF8-213ENST00000576407 GNG5P63218 68 aa6.3□□□□□ -1.4
PRPF8-213ENST00000576407 HIST1H1AQ02539 215 aaPredicted RBP6.3□□□□□ -1.4
PRPF8-213ENST00000576407 STHQ8IWL8 128 aa6.3□□□□□ -1.4
PRPF8-213ENST00000576407 TMEM256Q8N2U0 113 aa6.3□□□□□ -1.4
PRPF8-213ENST00000576407 OR10J6PQ8NGY7 276 aa6.3□□□□□ -1.4
PRPF8-213ENST00000576407 EPDR1Q9UM22 224 aa6.3□□□□□ -1.4
PRPF8-213ENST00000576407 HLA-DRB4X5D2U9 266 aa6.3□□□□□ -1.4
PRPF8-213ENST00000576407 GAGE12BA1L429 117 aa6.29□□□□□ -1.4
PRPF8-213ENST00000576407 RBMY1BA6NDE4 496 aaKnown RBP6.29□□□□□ -1.4
PRPF8-213ENST00000576407 RBMY1EA6NEQ0 496 aaKnown RBP6.29□□□□□ -1.4
PRPF8-213ENST00000576407 A8MZ25 164 aa6.29□□□□□ -1.4
PRPF8-213ENST00000576407 C11orf94C9JXX5 98 aa6.29□□□□□ -1.4
PRPF8-213ENST00000576407 NPIPB6E9PJ23 425 aa6.29□□□□□ -1.4
PRPF8-213ENST00000576407 H0Y8G0 127 aa6.29□□□□□ -1.4
PRPF8-213ENST00000576407 CRXO43186 299 aaPredicted RBP6.29□□□□□ -1.4
PRPF8-213ENST00000576407 DUSP14O95147 198 aaKnown RBP6.29□□□□□ -1.4
PRPF8-213ENST00000576407 IGKV3-20P01619 116 aa6.29□□□□□ -1.4
PRPF8-213ENST00000576407 TCRAP04437 139 aa6.29□□□□□ -1.4
PRPF8-213ENST00000576407 RBMY1DP0C7P1 496 aaKnown RBP6.29□□□□□ -1.4
PRPF8-213ENST00000576407 GOLT1AQ6ZVE7 132 aa6.29□□□□□ -1.4
PRPF8-213ENST00000576407 TRPT1Q86TN4 253 aaKnown RBP6.29□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 115.5 ms