RNA–Protein interactions for RNA: ENST00000575049.1

TSR1-203, Transcript of TSR1, ribosome maturation factor, humanhuman

TSL 3

Gene TSR1, Length 387 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSR1-203ENST00000575049 Q8IYB0 196 aa3.34□□□□□ -1.87
TSR1-203ENST00000575049 EXOC3-AS1Q8N2X6 119 aa3.34□□□□□ -1.87
TSR1-203ENST00000575049 MAPK1IP1LQ8NDC0 245 aa3.34□□□□□ -1.87
TSR1-203ENST00000575049 OR4A5Q8NH83 315 aa3.34□□□□□ -1.87
TSR1-203ENST00000575049 C18orf32Q8TCD1 76 aa3.34□□□□□ -1.87
TSR1-203ENST00000575049 IGF2BP2-AS1Q96M15 143 aa3.34□□□□□ -1.87
TSR1-203ENST00000575049 MGST2Q99735 147 aa3.34□□□□□ -1.87
TSR1-203ENST00000575049 PMCHL2Q9BQD1 86 aa3.34□□□□□ -1.87
TSR1-203ENST00000575049 CHCHD7Q9BUK0 85 aa3.34□□□□□ -1.87
TSR1-203ENST00000575049 TMEM167BQ9NRX6 74 aa3.34□□□□□ -1.87
TSR1-203ENST00000575049 TRAPPC2LQ9UL33 140 aa3.34□□□□□ -1.87
TSR1-203ENST00000575049 RBM7Q9Y580 266 aaKnown RBP3.34□□□□□ -1.87
TSR1-203ENST00000575049 ATG2AQ2TAZ0 1938 aa3.34□□□□□ -1.88
TSR1-203ENST00000575049 SRCAPQ6ZRS2 3230 aa3.33□□□□□ -1.88
TSR1-203ENST00000575049 TRAV4A0A0B4J268 109 aa3.33□□□□□ -1.88
TSR1-203ENST00000575049 C17orf98A8MV24 154 aa3.33□□□□□ -1.88
TSR1-203ENST00000575049 OR2H2O95918 312 aa3.33□□□□□ -1.88
TSR1-203ENST00000575049 FREM3P0C091 2139 aa3.33□□□□□ -1.88
TSR1-203ENST00000575049 IGLC1P0CG04 106 aa3.33□□□□□ -1.88
TSR1-203ENST00000575049 INAFM2P0DMQ5 153 aa3.33□□□□□ -1.88
TSR1-203ENST00000575049 PLGLB1Q02325 96 aa3.33□□□□□ -1.88
TSR1-203ENST00000575049 ZNF816Q0VGE8 651 aaPredicted RBP3.33□□□□□ -1.88
TSR1-203ENST00000575049 C15orf32Q32M92 178 aa3.33□□□□□ -1.88
TSR1-203ENST00000575049 MIC13Q5XKP0 118 aa3.33□□□□□ -1.88
TSR1-203ENST00000575049 MRPL54Q6P161 138 aaKnown RBP3.33□□□□□ -1.88
TSR1-203ENST00000575049 SLC25A40Q8TBP6 338 aa3.33□□□□□ -1.88
TSR1-203ENST00000575049 CIRBP-AS1Q8TBR5 109 aa3.33□□□□□ -1.88
TSR1-203ENST00000575049 CHCHD1Q96BP2 118 aaKnown RBP3.33□□□□□ -1.88
TSR1-203ENST00000575049 PLEKHB2Q96CS7 222 aa3.33□□□□□ -1.88
TSR1-203ENST00000575049 IMMP1LQ96LU5 166 aa3.33□□□□□ -1.88
TSR1-203ENST00000575049 TMEM70Q9BUB7 260 aa3.33□□□□□ -1.88
TSR1-203ENST00000575049 NPVFQ9HCQ7 196 aa3.33□□□□□ -1.88
TSR1-203ENST00000575049 CYSLTR1Q9Y271 337 aa3.33□□□□□ -1.88
TSR1-203ENST00000575049 PTPRSQ13332 1948 aa3.32□□□□□ -1.88
TSR1-203ENST00000575049 TET2Q6N021 2002 aaPredicted RBP3.32□□□□□ -1.88
TSR1-203ENST00000575049 A0A087WX48 190 aa3.32□□□□□ -1.88
TSR1-203ENST00000575049 TMEM30CPA0ZSE6 113 aa3.32□□□□□ -1.88
TSR1-203ENST00000575049 A6NDX4 124 aa3.32□□□□□ -1.88
TSR1-203ENST00000575049 OR2T8A6NH00 312 aa3.32□□□□□ -1.88
TSR1-203ENST00000575049 M0R2Z0 102 aa3.32□□□□□ -1.88
TSR1-203ENST00000575049 CORTO00230 105 aa3.32□□□□□ -1.88
TSR1-203ENST00000575049 CCL3P10147 92 aa3.32□□□□□ -1.88
TSR1-203ENST00000575049 DEFA4P12838 97 aa3.32□□□□□ -1.88
TSR1-203ENST00000575049 CKS1BP61024 79 aa3.32□□□□□ -1.88
TSR1-203ENST00000575049 SEC11AP67812 179 aa3.32□□□□□ -1.88
TSR1-203ENST00000575049 PSG9Q00887 426 aa3.32□□□□□ -1.88
TSR1-203ENST00000575049 HIST1H1AQ02539 215 aaPredicted RBP3.32□□□□□ -1.88
TSR1-203ENST00000575049 SYCNQ0VAF6 134 aa3.32□□□□□ -1.88
TSR1-203ENST00000575049 LTC4SQ16873 150 aa3.32□□□□□ -1.88
TSR1-203ENST00000575049 Q56UQ5 140 aa3.32□□□□□ -1.88
TSR1-203ENST00000575049 AMMECR1LQ6DCA0 310 aa3.32□□□□□ -1.88
TSR1-203ENST00000575049 SLC25A34Q6PIV7 304 aa3.32□□□□□ -1.88
TSR1-203ENST00000575049 ATOH7Q8N100 152 aa3.32□□□□□ -1.88
TSR1-203ENST00000575049 FAM19A2Q8N3H0 131 aa3.32□□□□□ -1.88
TSR1-203ENST00000575049 CD177Q8N6Q3 437 aa3.32□□□□□ -1.88
TSR1-203ENST00000575049 Q8N9W7 124 aa3.32□□□□□ -1.88
TSR1-203ENST00000575049 ITLN2Q8WWU7 325 aaPredicted RBP3.32□□□□□ -1.88
TSR1-203ENST00000575049 B9D2Q9BPU9 175 aa3.32□□□□□ -1.88
TSR1-203ENST00000575049 SHANK2-AS3Q9BTD1 123 aa3.32□□□□□ -1.88
TSR1-203ENST00000575049 RTL8AQ9BWD3 113 aa3.32□□□□□ -1.88
TSR1-203ENST00000575049 TMEM191AQ9H0A3 160 aa3.32□□□□□ -1.88
TSR1-203ENST00000575049 IFI27L2Q9H2X8 130 aa3.32□□□□□ -1.88
TSR1-203ENST00000575049 TNFRSF19Q9NS68 423 aa3.32□□□□□ -1.88
TSR1-203ENST00000575049 ZNF835Q9Y2P0 537 aa3.32□□□□□ -1.88
TSR1-203ENST00000575049 SOX21Q9Y651 276 aaPredicted RBP3.32□□□□□ -1.88
TSR1-203ENST00000575049 YLPM1P49750 1951 aaKnown RBP3.31□□□□□ -1.88
TSR1-203ENST00000575049 ADAMTS9Q9P2N4 1935 aa3.31□□□□□ -1.88
TSR1-203ENST00000575049 H3BRM9 83 aa3.31□□□□□ -1.88
TSR1-203ENST00000575049 SYS1-DBNDD2H3BUS1 97 aa3.31□□□□□ -1.88
TSR1-203ENST00000575049 MRPL33O75394 65 aaKnown RBP3.31□□□□□ -1.88
TSR1-203ENST00000575049 APOA2P02652 100 aa3.31□□□□□ -1.88
TSR1-203ENST00000575049 SMIM17P0DL12 118 aa3.31□□□□□ -1.88
TSR1-203ENST00000575049 NTF3P20783 257 aa3.31□□□□□ -1.88
TSR1-203ENST00000575049 EMP1P54849 157 aa3.31□□□□□ -1.88
TSR1-203ENST00000575049 TAS2R45P59539 299 aa3.31□□□□□ -1.88
TSR1-203ENST00000575049 BSPH1Q075Z2 132 aa3.31□□□□□ -1.88
TSR1-203ENST00000575049 GDF5OSQ5U4N7 250 aa3.31□□□□□ -1.88
TSR1-203ENST00000575049 ZFAND6Q6FIF0 208 aa3.31□□□□□ -1.88
TSR1-203ENST00000575049 GTF2H5Q6ZYL4 71 aa3.31□□□□□ -1.88
TSR1-203ENST00000575049 MIR17HGQ75NE6 70 aa3.31□□□□□ -1.88
TSR1-203ENST00000575049 SPATA12Q7Z6I5 190 aa3.31□□□□□ -1.88
TSR1-203ENST00000575049 WDR86Q86TI4 376 aa3.31□□□□□ -1.88
TSR1-203ENST00000575049 FER1L6-AS1Q8NA97 138 aa3.31□□□□□ -1.88
TSR1-203ENST00000575049 C11orf68Q9H3H3 251 aaKnown RBP3.31□□□□□ -1.88
TSR1-203ENST00000575049 C21orf62Q9NYP8 219 aa3.31□□□□□ -1.88
TSR1-203ENST00000575049 HCFC1P51610 2035 aa3.31□□□□□ -1.88
TSR1-203ENST00000575049 TRBV19A0A075B6N1 114 aa3.3□□□□□ -1.88
TSR1-203ENST00000575049 IGHV3OR15-7A0A075B7D8 119 aa3.3□□□□□ -1.88
TSR1-203ENST00000575049 IGHV3-43A0A0B4J1X8 118 aa3.3□□□□□ -1.88
TSR1-203ENST00000575049 MUC21A0A0G2JKD1 596 aa3.3□□□□□ -1.88
TSR1-203ENST00000575049 MUC21A0A140T8X8 626 aa3.3□□□□□ -1.88
TSR1-203ENST00000575049 GGTLC3B5MD39 225 aa3.3□□□□□ -1.88
TSR1-203ENST00000575049 K7EP34 96 aa3.3□□□□□ -1.88
TSR1-203ENST00000575049 SPINK4O60575 86 aa3.3□□□□□ -1.88
TSR1-203ENST00000575049 CD7P09564 240 aa3.3□□□□□ -1.88
TSR1-203ENST00000575049 COX8AP10176 69 aa3.3□□□□□ -1.88
TSR1-203ENST00000575049 CD28P10747 220 aa3.3□□□□□ -1.88
TSR1-203ENST00000575049 COX6A1P12074 109 aa3.3□□□□□ -1.88
TSR1-203ENST00000575049 KRTAP10-12P60413 245 aa3.3□□□□□ -1.88
TSR1-203ENST00000575049 FXYD3Q14802 87 aa3.3□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms