RNA–Protein interactions for RNA: ENST00000573989.1

TRAPPC1-206, Transcript of trafficking protein particle complex 1, humanhuman

TSL 2

Gene TRAPPC1, Length 436 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC1-206ENST00000573989 TRGV1A0A0A0MS02 117 aa9.07□□□□□ -0.96
TRAPPC1-206ENST00000573989 HTN3P15516 51 aa9.07□□□□□ -0.96
TRAPPC1-206ENST00000573989 ZNF80P51504 273 aaPredicted RBP9.07□□□□□ -0.96
TRAPPC1-206ENST00000573989 FAM162BQ5T6X4 162 aa9.07□□□□□ -0.96
TRAPPC1-206ENST00000573989 TEX261Q6UWH6 196 aa9.07□□□□□ -0.96
TRAPPC1-206ENST00000573989 BAGE2Q86Y30 109 aa9.07□□□□□ -0.96
TRAPPC1-206ENST00000573989 LYPD6BQ8NI32 183 aa9.07□□□□□ -0.96
TRAPPC1-206ENST00000573989 C11orf52Q96A22 123 aa9.07□□□□□ -0.96
TRAPPC1-206ENST00000573989 FAM210BQ96KR6 192 aa9.07□□□□□ -0.96
TRAPPC1-206ENST00000573989 TRGV2A0A075B6R0 118 aa9.06□□□□□ -0.96
TRAPPC1-206ENST00000573989 GAGE12BA1L429 117 aa9.06□□□□□ -0.96
TRAPPC1-206ENST00000573989 SPINK4O60575 86 aa9.06□□□□□ -0.96
TRAPPC1-206ENST00000573989 GAGE7O76087 117 aa9.06□□□□□ -0.96
TRAPPC1-206ENST00000573989 GAGE12FP0CL80 117 aa9.06□□□□□ -0.96
TRAPPC1-206ENST00000573989 GAGE12GP0CL81 117 aa9.06□□□□□ -0.96
TRAPPC1-206ENST00000573989 GAGE12IP0CL82 117 aa9.06□□□□□ -0.96
TRAPPC1-206ENST00000573989 RPL35P42766 123 aaKnown RBP9.06□□□□□ -0.96
TRAPPC1-206ENST00000573989 LINC00612Q8N6U2 182 aa9.06□□□□□ -0.96
TRAPPC1-206ENST00000573989 ZC2HC1AQ96GY0 325 aa9.06□□□□□ -0.96
TRAPPC1-206ENST00000573989 NDUFAF3Q9BU61 184 aa9.06□□□□□ -0.96
TRAPPC1-206ENST00000573989 MED9Q9NWA0 146 aa9.06□□□□□ -0.96
TRAPPC1-206ENST00000573989 TENM2Q9NT68 2774 aa9.06□□□□□ -0.96
TRAPPC1-206ENST00000573989 STARD9Q9P2P6 4700 aa9.05□□□□□ -0.96
TRAPPC1-206ENST00000573989 IGHV4-4A0A075B6R2 117 aa9.05□□□□□ -0.96
TRAPPC1-206ENST00000573989 RBFOX3A6NFN3 312 aa9.05□□□□□ -0.96
TRAPPC1-206ENST00000573989 F5H768 121 aa9.05□□□□□ -0.96
TRAPPC1-206ENST00000573989 GNRH2O43555 120 aa9.05□□□□□ -0.96
TRAPPC1-206ENST00000573989 ORM1P02763 201 aa9.05□□□□□ -0.96
TRAPPC1-206ENST00000573989 TYMSP04818 313 aa9.05□□□□□ -0.96
TRAPPC1-206ENST00000573989 Q6ZTI0 123 aa9.05□□□□□ -0.96
TRAPPC1-206ENST00000573989 C18orf15Q96N68 181 aa9.05□□□□□ -0.96
TRAPPC1-206ENST00000573989 MDFICQ9P1T7 246 aa9.05□□□□□ -0.96
TRAPPC1-206ENST00000573989 IGHV3-16A0A0C4DH30 117 aa9.04□□□□□ -0.96
TRAPPC1-206ENST00000573989 B4DEV8 164 aa9.04□□□□□ -0.96
TRAPPC1-206ENST00000573989 M0R2P5 195 aa9.04□□□□□ -0.96
TRAPPC1-206ENST00000573989 S100A4P26447 101 aaKnown RBP9.04□□□□□ -0.96
TRAPPC1-206ENST00000573989 GNG4P50150 75 aa9.04□□□□□ -0.96
TRAPPC1-206ENST00000573989 ZNF674Q2M3X9 581 aa9.04□□□□□ -0.96
TRAPPC1-206ENST00000573989 NHLRC2Q8NBF2 726 aa9.04□□□□□ -0.96
TRAPPC1-206ENST00000573989 SMIM12Q96EX1 92 aa9.04□□□□□ -0.96
TRAPPC1-206ENST00000573989 EIF5A2Q9GZV4 153 aaKnown RBP9.04□□□□□ -0.96
TRAPPC1-206ENST00000573989 BIN3Q9NQY0 253 aa9.04□□□□□ -0.96
TRAPPC1-206ENST00000573989 TMEM250H0YL14 139 aa9.03□□□□□ -0.96
TRAPPC1-206ENST00000573989 SH2D1AO60880 128 aa9.03□□□□□ -0.96
TRAPPC1-206ENST00000573989 ZNF506Q5JVG8 444 aa9.03□□□□□ -0.96
TRAPPC1-206ENST00000573989 DERL1Q9BUN8 251 aa9.03□□□□□ -0.96
TRAPPC1-206ENST00000573989 MRPL16Q9NX20 251 aaKnown RBP9.03□□□□□ -0.96
TRAPPC1-206ENST00000573989 NDUFS6O75380 124 aaKnown RBP9.02□□□□□ -0.97
TRAPPC1-206ENST00000573989 ASIPP42127 132 aa9.02□□□□□ -0.97
TRAPPC1-206ENST00000573989 OR5I1Q13606 314 aa9.02□□□□□ -0.97
TRAPPC1-206ENST00000573989 CENPWQ5EE01 88 aa9.02□□□□□ -0.97
TRAPPC1-206ENST00000573989 TOR2AQ5JU69 321 aa9.02□□□□□ -0.97
TRAPPC1-206ENST00000573989 C15orf53Q8NAA6 179 aa9.02□□□□□ -0.97
TRAPPC1-206ENST00000573989 RASL10AQ92737 203 aa9.02□□□□□ -0.97
TRAPPC1-206ENST00000573989 DAZAP1Q96EP5 407 aaKnown RBP9.02□□□□□ -0.97
TRAPPC1-206ENST00000573989 FAM210AQ96ND0 272 aa9.02□□□□□ -0.97
TRAPPC1-206ENST00000573989 MLST8Q9BVC4 326 aa9.02□□□□□ -0.97
TRAPPC1-206ENST00000573989 C11orf21Q9P2W6 132 aa9.02□□□□□ -0.97
TRAPPC1-206ENST00000573989 APLNQ9ULZ1 77 aa9.02□□□□□ -0.97
TRAPPC1-206ENST00000573989 MUC4Q99102 2169 aa9.02□□□□□ -0.97
TRAPPC1-206ENST00000573989 IGKV3D-20A0A0C4DH25 116 aa9.01□□□□□ -0.97
TRAPPC1-206ENST00000573989 LCE6AA0A183 80 aa9.01□□□□□ -0.97
TRAPPC1-206ENST00000573989 M0R036 132 aa9.01□□□□□ -0.97
TRAPPC1-206ENST00000573989 MGST1P10620 155 aaKnown RBP9.01□□□□□ -0.97
TRAPPC1-206ENST00000573989 CRIP1P50238 77 aa9.01□□□□□ -0.97
TRAPPC1-206ENST00000573989 SLAQ13239 276 aa9.01□□□□□ -0.97
TRAPPC1-206ENST00000573989 LINC01559Q495D7 138 aa9.01□□□□□ -0.97
TRAPPC1-206ENST00000573989 PRR27Q6MZM9 219 aa9.01□□□□□ -0.97
TRAPPC1-206ENST00000573989 TMEM88Q6PEY1 159 aa9.01□□□□□ -0.97
TRAPPC1-206ENST00000573989 RAB19A4D1S5 217 aa9□□□□□ -0.97
TRAPPC1-206ENST00000573989 KRBOX1C9JBD0 128 aa9□□□□□ -0.97
TRAPPC1-206ENST00000573989 RAB14P61106 215 aa9□□□□□ -0.97
TRAPPC1-206ENST00000573989 ZNF876PQ49A33 203 aa9□□□□□ -0.97
TRAPPC1-206ENST00000573989 DNLZQ5SXM8 178 aa9□□□□□ -0.97
TRAPPC1-206ENST00000573989 C9orf85Q96MD7 179 aa9□□□□□ -0.97
TRAPPC1-206ENST00000573989 IL36BQ9NZH7 164 aa9□□□□□ -0.97
TRAPPC1-206ENST00000573989 C9JCJ5 164 aa8.99□□□□□ -0.97
TRAPPC1-206ENST00000573989 LY6G6CO95867 125 aa8.99□□□□□ -0.97
TRAPPC1-206ENST00000573989 P0DMU3 169 aa8.99□□□□□ -0.97
TRAPPC1-206ENST00000573989 FAM231AP0DMU4 169 aa8.99□□□□□ -0.97
TRAPPC1-206ENST00000573989 FAM231CP0DMU5 169 aa8.99□□□□□ -0.97
TRAPPC1-206ENST00000573989 CEBPGP53567 150 aa8.99□□□□□ -0.97
TRAPPC1-206ENST00000573989 LGALS9CQ6DKI2 356 aa8.99□□□□□ -0.97
TRAPPC1-206ENST00000573989 LINC00476Q8WZB0 136 aa8.99□□□□□ -0.97
TRAPPC1-206ENST00000573989 PTH2Q96A98 100 aa8.99□□□□□ -0.97
TRAPPC1-206ENST00000573989 PARLQ9H300 379 aa8.99□□□□□ -0.97
TRAPPC1-206ENST00000573989 TMSB15BA0A087X1C1 80 aa8.98□□□□□ -0.97
TRAPPC1-206ENST00000573989 TRAV4A0A0B4J268 109 aa8.98□□□□□ -0.97
TRAPPC1-206ENST00000573989 CIDEAO60543 219 aa8.98□□□□□ -0.97
TRAPPC1-206ENST00000573989 RNASE3P12724 160 aaKnown RBP8.98□□□□□ -0.97
TRAPPC1-206ENST00000573989 SYT8Q8NBV8 401 aa8.98□□□□□ -0.97
TRAPPC1-206ENST00000573989 OR4C5Q8NGB2 326 aa8.98□□□□□ -0.97
TRAPPC1-206ENST00000573989 PHLDA3Q9Y5J5 127 aa8.98□□□□□ -0.97
TRAPPC1-206ENST00000573989 DYNC2H1Q8NCM8 4307 aaKnown RBP8.97□□□□□ -0.97
TRAPPC1-206ENST00000573989 TRAV26-1A0A087WT03 109 aa8.97□□□□□ -0.97
TRAPPC1-206ENST00000573989 TRGV4A0A0C4DH28 118 aa8.97□□□□□ -0.97
TRAPPC1-206ENST00000573989 XKRY2A2RUG3 117 aa8.97□□□□□ -0.97
TRAPPC1-206ENST00000573989 GRIFINA4D1Z8 144 aa8.97□□□□□ -0.97
TRAPPC1-206ENST00000573989 H3BNG1 76 aa8.97□□□□□ -0.97
TRAPPC1-206ENST00000573989 H3BVH4 76 aa8.97□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 96.7 ms