RNA–Protein interactions for RNA: ENST00000573852.5

SCARF1-206, Transcript of scavenger receptor class F member 1, humanhuman

TSL 1 (best)

Gene SCARF1, Length 2,698 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARF1-206ENST00000573852 C16orf92Q96LL3 132 aa14.54□□□□□ -0.08
SCARF1-206ENST00000573852 J3KRW8 73 aa14.53□□□□□ -0.08
SCARF1-206ENST00000573852 HLA-DRB4P13762 266 aa14.53□□□□□ -0.08
SCARF1-206ENST00000573852 HLA-DRB4X5D2U9 266 aa14.53□□□□□ -0.08
SCARF1-206ENST00000573852 ATP5G2Q06055 141 aa14.53□□□□□ -0.08
SCARF1-206ENST00000573852 C5orf56Q8N8D9 126 aa14.53□□□□□ -0.08
SCARF1-206ENST00000573852 LINC00527Q9UJ94 153 aa14.53□□□□□ -0.08
SCARF1-206ENST00000573852 CLEC2AQ6UVW9 174 aa14.52□□□□□ -0.09
SCARF1-206ENST00000573852 TMEM219Q86XT9 240 aa14.52□□□□□ -0.09
SCARF1-206ENST00000573852 AGRNO00468 2067 aa14.52□□□□□ -0.09
SCARF1-206ENST00000573852 GLMPQ8WWB7 406 aa14.51□□□□□ -0.09
SCARF1-206ENST00000573852 COL6A6A6NMZ7 2263 aa14.51□□□□□ -0.09
SCARF1-206ENST00000573852 AKAP6Q13023 2319 aa14.51□□□□□ -0.09
SCARF1-206ENST00000573852 ITLN2Q8WWU7 325 aaPredicted RBP14.51□□□□□ -0.09
SCARF1-206ENST00000573852 SMIM2Q9BVW6 85 aa14.51□□□□□ -0.09
SCARF1-206ENST00000573852 NPFFO15130 113 aa14.5□□□□□ -0.09
SCARF1-206ENST00000573852 LMO4P61968 165 aa14.5□□□□□ -0.09
SCARF1-206ENST00000573852 MRAP2Q96G30 205 aa14.5□□□□□ -0.09
SCARF1-206ENST00000573852 KLRB1Q12918 225 aa14.5□□□□□ -0.09
SCARF1-206ENST00000573852 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP14.49□□□□□ -0.09
SCARF1-206ENST00000573852 DEFB1P60022 68 aa14.49□□□□□ -0.09
SCARF1-206ENST00000573852 KLK15Q9H2R5 256 aa14.49□□□□□ -0.09
SCARF1-206ENST00000573852 M0R381 172 aa14.49□□□□□ -0.09
SCARF1-206ENST00000573852 PLNP26678 52 aa14.49□□□□□ -0.09
SCARF1-206ENST00000573852 GPHB5Q86YW7 130 aa14.49□□□□□ -0.09
SCARF1-206ENST00000573852 BPESC1Q9GZL8 116 aa14.49□□□□□ -0.09
SCARF1-206ENST00000573852 UBTD1Q9HAC8 227 aa14.49□□□□□ -0.09
SCARF1-206ENST00000573852 UNQ9165/PRO28630Q6UXU0 137 aa14.48□□□□□ -0.09
SCARF1-206ENST00000573852 C9orf139Q6ZV77 190 aa14.48□□□□□ -0.09
SCARF1-206ENST00000573852 ZFAND2AQ8N6M9 145 aa14.48□□□□□ -0.09
SCARF1-206ENST00000573852 RASL10AQ92737 203 aa14.48□□□□□ -0.09
SCARF1-206ENST00000573852 TRAV41A0A0B4J266 112 aa14.48□□□□□ -0.09
SCARF1-206ENST00000573852 SPOCK3Q9BQ16 436 aa14.48□□□□□ -0.09
SCARF1-206ENST00000573852 CELSR1Q9NYQ6 3014 aa14.47□□□□□ -0.09
SCARF1-206ENST00000573852 IGLL5B9A064 214 aa14.47□□□□□ -0.09
SCARF1-206ENST00000573852 E9PLD3 99 aa14.47□□□□□ -0.09
SCARF1-206ENST00000573852 H7C1H1 209 aa14.47□□□□□ -0.09
SCARF1-206ENST00000573852 TRBV12-3P01733 135 aa14.47□□□□□ -0.09
SCARF1-206ENST00000573852 C19orf54Q5BKX5 351 aa14.47□□□□□ -0.09
SCARF1-206ENST00000573852 RPL39LQ96EH5 51 aaKnown RBP14.47□□□□□ -0.09
SCARF1-206ENST00000573852 LENEPQ9Y5L5 61 aa14.47□□□□□ -0.09
SCARF1-206ENST00000573852 IGHV3OR16-10A0A075B7F0 116 aa14.47□□□□□ -0.09
SCARF1-206ENST00000573852 F8VRH5 84 aa14.47□□□□□ -0.09
SCARF1-206ENST00000573852 TRAV12-1A0A0B4J245 112 aa14.46□□□□□ -0.09
SCARF1-206ENST00000573852 ARL3P36405 182 aa14.46□□□□□ -0.09
SCARF1-206ENST00000573852 SUMO2P61956 95 aaKnown RBP14.46□□□□□ -0.09
SCARF1-206ENST00000573852 RPL24P83731 157 aaKnown RBP14.46□□□□□ -0.09
SCARF1-206ENST00000573852 SCGB3A1Q96QR1 104 aa14.46□□□□□ -0.09
SCARF1-206ENST00000573852 TEX48A0A1B0GUV7 120 aa14.46□□□□□ -0.1
SCARF1-206ENST00000573852 TAL2Q16559 108 aa14.46□□□□□ -0.1
SCARF1-206ENST00000573852 C12orf74Q32Q52 190 aa14.46□□□□□ -0.1
SCARF1-206ENST00000573852 C14orf178Q8N769 122 aaPredicted RBP14.46□□□□□ -0.1
SCARF1-206ENST00000573852 RAXQ9Y2V3 346 aa14.46□□□□□ -0.1
SCARF1-206ENST00000573852 TOMM6Q96B49 74 aa14.45□□□□□ -0.1
SCARF1-206ENST00000573852 LINC00477Q96M19 166 aa14.45□□□□□ -0.1
SCARF1-206ENST00000573852 HIST1H4GQ99525 98 aa14.45□□□□□ -0.1
SCARF1-206ENST00000573852 FAM223BA6NKX1 122 aa14.45□□□□□ -0.1
SCARF1-206ENST00000573852 FAM223AQ8IWN6 122 aa14.45□□□□□ -0.1
SCARF1-206ENST00000573852 CHTOPQ9Y3Y2 248 aaKnown RBP14.45□□□□□ -0.1
SCARF1-206ENST00000573852 ORMDL2Q53FV1 153 aa14.44□□□□□ -0.1
SCARF1-206ENST00000573852 HIVEP3Q5T1R4 2406 aa14.44□□□□□ -0.1
SCARF1-206ENST00000573852 RNF223E7ERA6 249 aa14.44□□□□□ -0.1
SCARF1-206ENST00000573852 S100A4P26447 101 aaKnown RBP14.44□□□□□ -0.1
SCARF1-206ENST00000573852 NEXN-AS1Q8NBZ9 246 aa14.44□□□□□ -0.1
SCARF1-206ENST00000573852 MOB4Q9Y3A3 225 aa14.44□□□□□ -0.1
SCARF1-206ENST00000573852 TRBV7-3A0A075B6L6 115 aa14.43□□□□□ -0.1
SCARF1-206ENST00000573852 TRAV21A0A0B4J279 112 aa14.43□□□□□ -0.1
SCARF1-206ENST00000573852 SOCS3O14543 225 aa14.43□□□□□ -0.1
SCARF1-206ENST00000573852 ANXA2RQ3ZCQ2 193 aa14.43□□□□□ -0.1
SCARF1-206ENST00000573852 FOXI2Q6ZQN5 318 aa14.43□□□□□ -0.1
SCARF1-206ENST00000573852 OR10J6PQ8NGY7 276 aa14.43□□□□□ -0.1
SCARF1-206ENST00000573852 ZNF479Q96JC4 524 aa14.43□□□□□ -0.1
SCARF1-206ENST00000573852 C20orf78Q9BR46 151 aa14.43□□□□□ -0.1
SCARF1-206ENST00000573852 DPH3P1Q9H4G8 78 aa14.43□□□□□ -0.1
SCARF1-206ENST00000573852 VPS13CQ709C8 3753 aa14.42□□□□□ -0.1
SCARF1-206ENST00000573852 ATP6V0BQ99437 205 aa14.42□□□□□ -0.1
SCARF1-206ENST00000573852 PHLDA3Q9Y5J5 127 aa14.42□□□□□ -0.1
SCARF1-206ENST00000573852 F6UB75 175 aa14.42□□□□□ -0.1
SCARF1-206ENST00000573852 ASIPP42127 132 aa14.42□□□□□ -0.1
SCARF1-206ENST00000573852 OR11H12B2RN74 326 aa14.41□□□□□ -0.1
SCARF1-206ENST00000573852 GNRH2O43555 120 aa14.41□□□□□ -0.1
SCARF1-206ENST00000573852 MGPP08493 103 aa14.41□□□□□ -0.1
SCARF1-206ENST00000573852 RNASE4P34096 147 aaKnown RBP14.41□□□□□ -0.1
SCARF1-206ENST00000573852 OR11H1Q8NG94 326 aa14.41□□□□□ -0.1
SCARF1-206ENST00000573852 OR11H2Q8NH07 326 aa14.41□□□□□ -0.1
SCARF1-206ENST00000573852 MYMXA0A1B0GTQ4 84 aa14.41□□□□□ -0.1
SCARF1-206ENST00000573852 OVOL1O14753 267 aa14.41□□□□□ -0.1
SCARF1-206ENST00000573852 CIDEAO60543 219 aa14.41□□□□□ -0.1
SCARF1-206ENST00000573852 SLC25A16P16260 332 aa14.41□□□□□ -0.1
SCARF1-206ENST00000573852 WFDC2Q14508 124 aa14.41□□□□□ -0.1
SCARF1-206ENST00000573852 ABCA2Q9BZC7 2435 aa14.4□□□□□ -0.1
SCARF1-206ENST00000573852 C2orf66Q6UXQ4 117 aa14.4□□□□□ -0.1
SCARF1-206ENST00000573852 BAALCQ8WXS3 180 aa14.4□□□□□ -0.1
SCARF1-206ENST00000573852 CRIP2P52943 208 aaPredicted RBP14.4□□□□□ -0.1
SCARF1-206ENST00000573852 BRD3OSQ6XYD6 125 aa14.4□□□□□ -0.1
SCARF1-206ENST00000573852 NDUFA4O00483 81 aa14.39□□□□□ -0.11
SCARF1-206ENST00000573852 FAM19A4Q96LR4 140 aa14.39□□□□□ -0.11
SCARF1-206ENST00000573852 IGKV3-7A0A075B6H7 116 aa14.39□□□□□ -0.11
SCARF1-206ENST00000573852 H3BMG7 143 aa14.39□□□□□ -0.11
SCARF1-206ENST00000573852 RPL11P62913 178 aaKnown RBP14.39□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms