RNA–Protein interactions for RNA: ENST00000573126.1

RPAIN-212, Transcript of RPA interacting protein, humanhuman

TSL 2

Gene RPAIN, Length 2,728 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPAIN-212ENST00000573126 TM4SF20Q53R12 229 aa8.52□□□□□ -1.04
RPAIN-212ENST00000573126 NAA38Q9BRA0 125 aaKnown RBP8.52□□□□□ -1.04
RPAIN-212ENST00000573126 IGHV4-30-2A0A087WSY4 118 aa8.52□□□□□ -1.05
RPAIN-212ENST00000573126 NDUFA4O00483 81 aa8.52□□□□□ -1.05
RPAIN-212ENST00000573126 CRIP2P52943 208 aaPredicted RBP8.52□□□□□ -1.05
RPAIN-212ENST00000573126 SEC11AP67812 179 aa8.52□□□□□ -1.05
RPAIN-212ENST00000573126 ADAMTSL5Q6ZMM2 481 aa8.52□□□□□ -1.05
RPAIN-212ENST00000573126 ZFAND2AQ8N6M9 145 aa8.52□□□□□ -1.05
RPAIN-212ENST00000573126 NPFFR1Q9GZQ6 430 aa8.52□□□□□ -1.05
RPAIN-212ENST00000573126 MEGF9Q9H1U4 602 aa8.52□□□□□ -1.05
RPAIN-212ENST00000573126 HHLA3Q9XRX5 114 aa8.52□□□□□ -1.05
RPAIN-212ENST00000573126 ATP5J2P56134 94 aa8.52□□□□□ -1.05
RPAIN-212ENST00000573126 OR10J6PQ8NGY7 276 aa8.52□□□□□ -1.05
RPAIN-212ENST00000573126 C10orf105Q8TEF2 133 aa8.52□□□□□ -1.05
RPAIN-212ENST00000573126 DOPEY1Q5JWR5 2465 aa8.51□□□□□ -1.05
RPAIN-212ENST00000573126 MYO18BQ8IUG5 2567 aa8.51□□□□□ -1.05
RPAIN-212ENST00000573126 IGHG2P01859 326 aa8.51□□□□□ -1.05
RPAIN-212ENST00000573126 SRD5A1P18405 259 aa8.51□□□□□ -1.05
RPAIN-212ENST00000573126 S100A4P26447 101 aaKnown RBP8.51□□□□□ -1.05
RPAIN-212ENST00000573126 OR4X2Q8NGF9 303 aa8.51□□□□□ -1.05
RPAIN-212ENST00000573126 OR9G4Q8NGQ1 327 aa8.51□□□□□ -1.05
RPAIN-212ENST00000573126 PEF1Q9UBV8 284 aaKnown RBP8.51□□□□□ -1.05
RPAIN-212ENST00000573126 SOCS3O14543 225 aa8.51□□□□□ -1.05
RPAIN-212ENST00000573126 LAGE3Q14657 143 aa8.51□□□□□ -1.05
RPAIN-212ENST00000573126 CLEC2AQ6UVW9 174 aa8.51□□□□□ -1.05
RPAIN-212ENST00000573126 GTSCR1Q86UQ5 136 aa8.51□□□□□ -1.05
RPAIN-212ENST00000573126 ATP6V0BQ99437 205 aa8.51□□□□□ -1.05
RPAIN-212ENST00000573126 IGHV4-4A0A075B6R2 117 aa8.5□□□□□ -1.05
RPAIN-212ENST00000573126 TMEM8BA6NDV4 472 aa8.5□□□□□ -1.05
RPAIN-212ENST00000573126 IGKCP01834 107 aa8.5□□□□□ -1.05
RPAIN-212ENST00000573126 EDN2P20800 178 aa8.5□□□□□ -1.05
RPAIN-212ENST00000573126 HSD52Q0P140 79 aa8.5□□□□□ -1.05
RPAIN-212ENST00000573126 ZC2HC1BQ5TFG8 222 aa8.5□□□□□ -1.05
RPAIN-212ENST00000573126 TMEM160Q9NX00 188 aa8.5□□□□□ -1.05
RPAIN-212ENST00000573126 K7EP13 123 aa8.5□□□□□ -1.05
RPAIN-212ENST00000573126 RNASE4P34096 147 aaKnown RBP8.5□□□□□ -1.05
RPAIN-212ENST00000573126 TMEM95Q3KNT9 176 aa8.5□□□□□ -1.05
RPAIN-212ENST00000573126 C14orf178Q8N769 122 aaPredicted RBP8.5□□□□□ -1.05
RPAIN-212ENST00000573126 RAB37Q96AX2 223 aa8.5□□□□□ -1.05
RPAIN-212ENST00000573126 LINC00477Q96M19 166 aa8.5□□□□□ -1.05
RPAIN-212ENST00000573126 RHPN1-AS1Q9BWJ2 59 aa8.5□□□□□ -1.05
RPAIN-212ENST00000573126 ZMAT4Q9H898 229 aa8.5□□□□□ -1.05
RPAIN-212ENST00000573126 MRPL35Q9NZE8 188 aaKnown RBP8.5□□□□□ -1.05
RPAIN-212ENST00000573126 POLQO75417 2590 aa8.5□□□□□ -1.05
RPAIN-212ENST00000573126 ACACBO00763 2458 aa8.49□□□□□ -1.05
RPAIN-212ENST00000573126 ZANQ9Y493 2812 aa8.49□□□□□ -1.05
RPAIN-212ENST00000573126 A6NDN8 102 aa8.49□□□□□ -1.05
RPAIN-212ENST00000573126 A6NDX4 124 aa8.49□□□□□ -1.05
RPAIN-212ENST00000573126 RBX1P62877 108 aa8.49□□□□□ -1.05
RPAIN-212ENST00000573126 ANXA2RQ3ZCQ2 193 aa8.49□□□□□ -1.05
RPAIN-212ENST00000573126 USMG5Q96IX5 58 aa8.49□□□□□ -1.05
RPAIN-212ENST00000573126 CBY1Q9Y3M2 126 aa8.49□□□□□ -1.05
RPAIN-212ENST00000573126 LENEPQ9Y5L5 61 aa8.49□□□□□ -1.05
RPAIN-212ENST00000573126 CENPEQ02224 2701 aa8.49□□□□□ -1.05
RPAIN-212ENST00000573126 CREBBPQ92793 2442 aa8.49□□□□□ -1.05
RPAIN-212ENST00000573126 TRAV21A0A0B4J279 112 aa8.49□□□□□ -1.05
RPAIN-212ENST00000573126 AVPP01185 164 aa8.49□□□□□ -1.05
RPAIN-212ENST00000573126 MSMBP08118 114 aa8.49□□□□□ -1.05
RPAIN-212ENST00000573126 PHLDA3Q9Y5J5 127 aa8.49□□□□□ -1.05
RPAIN-212ENST00000573126 IGSF10Q6WRI0 2623 aa8.48□□□□□ -1.05
RPAIN-212ENST00000573126 DOPEY2Q9Y3R5 2298 aa8.48□□□□□ -1.05
RPAIN-212ENST00000573126 H3BUT2 72 aa8.48□□□□□ -1.05
RPAIN-212ENST00000573126 SIVA1O15304 175 aa8.48□□□□□ -1.05
RPAIN-212ENST00000573126 GNRH2O43555 120 aa8.48□□□□□ -1.05
RPAIN-212ENST00000573126 DPM2O94777 84 aa8.48□□□□□ -1.05
RPAIN-212ENST00000573126 MYOZ3Q8TDC0 251 aa8.48□□□□□ -1.05
RPAIN-212ENST00000573126 WFDC12Q8WWY7 111 aa8.48□□□□□ -1.05
RPAIN-212ENST00000573126 NRGNQ92686 78 aa8.48□□□□□ -1.05
RPAIN-212ENST00000573126 RPL39LQ96EH5 51 aaKnown RBP8.48□□□□□ -1.05
RPAIN-212ENST00000573126 SPOCK3Q9BQ16 436 aa8.48□□□□□ -1.05
RPAIN-212ENST00000573126 OVOL1O14753 267 aa8.48□□□□□ -1.05
RPAIN-212ENST00000573126 ATP5LO75964 103 aa8.48□□□□□ -1.05
RPAIN-212ENST00000573126 ASIPP42127 132 aa8.48□□□□□ -1.05
RPAIN-212ENST00000573126 SRSF1Q07955 248 aaKnown RBP eCLIP8.48□□□□□ -1.05
RPAIN-212ENST00000573126 JMJD8Q96S16 334 aa8.48□□□□□ -1.05
RPAIN-212ENST00000573126 SMIM2Q9BVW6 85 aa8.48□□□□□ -1.05
RPAIN-212ENST00000573126 MGPP08493 103 aa8.47□□□□□ -1.05
RPAIN-212ENST00000573126 AP1S3Q96PC3 154 aa8.47□□□□□ -1.05
RPAIN-212ENST00000573126 DAZ1Q9NQZ3 744 aaKnown RBP8.47□□□□□ -1.05
RPAIN-212ENST00000573126 GAGE12BA1L429 117 aa8.47□□□□□ -1.05
RPAIN-212ENST00000573126 GCSHP23434 173 aa8.47□□□□□ -1.05
RPAIN-212ENST00000573126 C21orf62-AS1Q17RA5 79 aa8.47□□□□□ -1.05
RPAIN-212ENST00000573126 RNF151Q2KHN1 245 aa8.47□□□□□ -1.05
RPAIN-212ENST00000573126 RASL10AQ92737 203 aa8.47□□□□□ -1.05
RPAIN-212ENST00000573126 MRAP2Q96G30 205 aa8.47□□□□□ -1.05
RPAIN-212ENST00000573126 ZFYVE26Q68DK2 2539 aa8.47□□□□□ -1.05
RPAIN-212ENST00000573126 FAM208BQ5VWN6 2430 aa8.47□□□□□ -1.05
RPAIN-212ENST00000573126 GAGE10A6NGK3 116 aa8.46□□□□□ -1.05
RPAIN-212ENST00000573126 C9orf118A6NHY6 69 aa8.46□□□□□ -1.05
RPAIN-212ENST00000573126 PRSS47A8MTI9 375 aa8.46□□□□□ -1.05
RPAIN-212ENST00000573126 H3BRM9 83 aa8.46□□□□□ -1.05
RPAIN-212ENST00000573126 SUMO2P61956 95 aaKnown RBP8.46□□□□□ -1.05
RPAIN-212ENST00000573126 CST9LQ9H4G1 147 aa8.46□□□□□ -1.05
RPAIN-212ENST00000573126 H3BUA1 57 aa8.46□□□□□ -1.06
RPAIN-212ENST00000573126 NDUFS8O00217 210 aa8.46□□□□□ -1.06
RPAIN-212ENST00000573126 TRBV25-1A0A075B6N4 114 aa8.45□□□□□ -1.06
RPAIN-212ENST00000573126 A0A0G2JLM5 398 aa8.45□□□□□ -1.06
RPAIN-212ENST00000573126 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP8.45□□□□□ -1.06
RPAIN-212ENST00000573126 IGLV1-40P01703 118 aa8.45□□□□□ -1.06
RPAIN-212ENST00000573126 RNASE3P12724 160 aaKnown RBP8.45□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 47.4 ms