RNA–Protein interactions for RNA: ENST00000571886.1

GTF3C1-213, Transcript of general transcription factor IIIC subunit 1, humanhuman

TSL 3

Gene GTF3C1, Length 721 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C1-213ENST00000571886 BCL2L11O43521 198 aa7.12□□□□□ -1.27
GTF3C1-213ENST00000571886 TYMSP04818 313 aa7.12□□□□□ -1.27
GTF3C1-213ENST00000571886 FLI1Q01543 452 aaPredicted RBP7.12□□□□□ -1.27
GTF3C1-213ENST00000571886 FAM159AQ6UWV7 190 aa7.12□□□□□ -1.27
GTF3C1-213ENST00000571886 SLC51BQ86UW2 128 aa7.12□□□□□ -1.27
GTF3C1-213ENST00000571886 TMEM75Q8N9X5 138 aa7.12□□□□□ -1.27
GTF3C1-213ENST00000571886 C18orf15Q96N68 181 aa7.12□□□□□ -1.27
GTF3C1-213ENST00000571886 ZNF471Q9BX82 626 aaPredicted RBP7.12□□□□□ -1.27
GTF3C1-213ENST00000571886 MAP1LC3BQ9GZQ8 125 aa7.12□□□□□ -1.27
GTF3C1-213ENST00000571886 LINC00588Q9Y4M8 146 aa7.12□□□□□ -1.27
GTF3C1-213ENST00000571886 DNAH2Q9P225 4427 aa7.11□□□□□ -1.27
GTF3C1-213ENST00000571886 HECTD4Q9Y4D8 3996 aa7.11□□□□□ -1.27
GTF3C1-213ENST00000571886 TRAV21A0A0B4J279 112 aa7.11□□□□□ -1.27
GTF3C1-213ENST00000571886 IGHV3-16A0A0C4DH30 117 aa7.11□□□□□ -1.27
GTF3C1-213ENST00000571886 SERTM2A0A1B0GWG4 89 aa7.11□□□□□ -1.27
GTF3C1-213ENST00000571886 KANTRA0A1W2PQU2 76 aa7.11□□□□□ -1.27
GTF3C1-213ENST00000571886 SEC11BP0C7V7 166 aa7.11□□□□□ -1.27
GTF3C1-213ENST00000571886 ZNF415Q09FC8 603 aa7.11□□□□□ -1.27
GTF3C1-213ENST00000571886 TDRG1Q3Y452 100 aa7.11□□□□□ -1.27
GTF3C1-213ENST00000571886 RNF212Q495C1 297 aa7.11□□□□□ -1.27
GTF3C1-213ENST00000571886 CYB561D1Q8N8Q1 229 aa7.11□□□□□ -1.27
GTF3C1-213ENST00000571886 ATG101Q9BSB4 218 aa7.11□□□□□ -1.27
GTF3C1-213ENST00000571886 A0A1B0GV50 99 aa7.1□□□□□ -1.27
GTF3C1-213ENST00000571886 PEX7O00628 323 aa7.1□□□□□ -1.27
GTF3C1-213ENST00000571886 GCGP01275 180 aa7.1□□□□□ -1.27
GTF3C1-213ENST00000571886 SFTA3P0C7M3 94 aa7.1□□□□□ -1.27
GTF3C1-213ENST00000571886 FHL2Q14192 279 aa7.1□□□□□ -1.27
GTF3C1-213ENST00000571886 ESRGQ1W209 222 aa7.1□□□□□ -1.27
GTF3C1-213ENST00000571886 LGALS9BQ3B8N2 356 aa7.1□□□□□ -1.27
GTF3C1-213ENST00000571886 Q6ZR54 194 aa7.1□□□□□ -1.27
GTF3C1-213ENST00000571886 FAM213BQ8TBF2 198 aa7.1□□□□□ -1.27
GTF3C1-213ENST00000571886 MBD3L1Q8WWY6 194 aa7.1□□□□□ -1.27
GTF3C1-213ENST00000571886 TRGV11A0A075B6L2 103 aa7.09□□□□□ -1.27
GTF3C1-213ENST00000571886 A0A096LPF7 62 aa7.09□□□□□ -1.27
GTF3C1-213ENST00000571886 RTL8CO15255 209 aa7.09□□□□□ -1.27
GTF3C1-213ENST00000571886 PAGE4O60829 102 aa7.09□□□□□ -1.27
GTF3C1-213ENST00000571886 CRIP1P50238 77 aa7.09□□□□□ -1.27
GTF3C1-213ENST00000571886 SMUG1Q53HV7 270 aa7.09□□□□□ -1.27
GTF3C1-213ENST00000571886 ZNRF2Q8NHG8 242 aa7.09□□□□□ -1.27
GTF3C1-213ENST00000571886 SFT2D1Q8WV19 159 aa7.09□□□□□ -1.27
GTF3C1-213ENST00000571886 RASL10AQ92737 203 aa7.09□□□□□ -1.27
GTF3C1-213ENST00000571886 ZNF479Q96JC4 524 aa7.09□□□□□ -1.27
GTF3C1-213ENST00000571886 SPXQ9BT56 116 aa7.09□□□□□ -1.27
GTF3C1-213ENST00000571886 ARL2-SNX15V9GYD0 113 aa7.09□□□□□ -1.27
GTF3C1-213ENST00000571886 DNAH17Q9UFH2 4485 aa7.09□□□□□ -1.27
GTF3C1-213ENST00000571886 IGKV3D-20A0A0C4DH25 116 aa7.08□□□□□ -1.28
GTF3C1-213ENST00000571886 K7EQM0 130 aa7.08□□□□□ -1.28
GTF3C1-213ENST00000571886 CRYBA4P53673 196 aa7.08□□□□□ -1.28
GTF3C1-213ENST00000571886 CCL20P78556 96 aa7.08□□□□□ -1.28
GTF3C1-213ENST00000571886 CST9LP1Q5W188 147 aa7.08□□□□□ -1.28
GTF3C1-213ENST00000571886 ZNF575Q86XF7 245 aa7.08□□□□□ -1.28
GTF3C1-213ENST00000571886 NDFIP1Q9BT67 221 aa7.08□□□□□ -1.28
GTF3C1-213ENST00000571886 FAT2Q9NYQ8 4349 aa7.07□□□□□ -1.28
GTF3C1-213ENST00000571886 UMAD1C9J7I0 102 aa7.07□□□□□ -1.28
GTF3C1-213ENST00000571886 H3BNG1 76 aa7.07□□□□□ -1.28
GTF3C1-213ENST00000571886 M0R2P5 195 aa7.07□□□□□ -1.28
GTF3C1-213ENST00000571886 PAX4O43316 350 aa7.07□□□□□ -1.28
GTF3C1-213ENST00000571886 PFN1P07737 140 aaKnown RBP7.07□□□□□ -1.28
GTF3C1-213ENST00000571886 RNASE3P12724 160 aaKnown RBP7.07□□□□□ -1.28
GTF3C1-213ENST00000571886 TPT1P13693 172 aaKnown RBP7.07□□□□□ -1.28
GTF3C1-213ENST00000571886 CCL18P55774 89 aa7.07□□□□□ -1.28
GTF3C1-213ENST00000571886 SAPCD1Q5SSQ6 148 aa7.07□□□□□ -1.28
GTF3C1-213ENST00000571886 DPPA3Q6W0C5 159 aa7.07□□□□□ -1.28
GTF3C1-213ENST00000571886 Q86TA4 180 aa7.07□□□□□ -1.28
GTF3C1-213ENST00000571886 COMMD7Q86VX2 200 aa7.07□□□□□ -1.28
GTF3C1-213ENST00000571886 STOML3Q8TAV4 291 aa7.07□□□□□ -1.28
GTF3C1-213ENST00000571886 HIST1H2BAQ96A08 127 aa7.07□□□□□ -1.28
GTF3C1-213ENST00000571886 NKX6-2Q9C056 277 aaPredicted RBP7.07□□□□□ -1.28
GTF3C1-213ENST00000571886 SDF2L1Q9HCN8 221 aa7.07□□□□□ -1.28
GTF3C1-213ENST00000571886 PGPEP1LA6NFU8 196 aa7.06□□□□□ -1.28
GTF3C1-213ENST00000571886 C9JCJ5 164 aa7.06□□□□□ -1.28
GTF3C1-213ENST00000571886 H2AFB1P0C5Y9 115 aa7.06□□□□□ -1.28
GTF3C1-213ENST00000571886 FAM3BP58499 235 aaPredicted RBP7.06□□□□□ -1.28
GTF3C1-213ENST00000571886 ZC2HC1AQ96GY0 325 aa7.06□□□□□ -1.28
GTF3C1-213ENST00000571886 KCNS1Q96KK3 526 aa7.06□□□□□ -1.28
GTF3C1-213ENST00000571886 C9orf85Q96MD7 179 aa7.06□□□□□ -1.28
GTF3C1-213ENST00000571886 PRO0255Q9UI72 69 aa7.06□□□□□ -1.28
GTF3C1-213ENST00000571886 HHLA3Q9XRX5 114 aa7.06□□□□□ -1.28
GTF3C1-213ENST00000571886 TRAV4A0A0B4J268 109 aa7.05□□□□□ -1.28
GTF3C1-213ENST00000571886 TRGV4A0A0C4DH28 118 aa7.05□□□□□ -1.28
GTF3C1-213ENST00000571886 LOC100131303A0A0U1RQF7 123 aa7.05□□□□□ -1.28
GTF3C1-213ENST00000571886 A0A1B0GVY2 172 aa7.05□□□□□ -1.28
GTF3C1-213ENST00000571886 SCO2A0A1W2PP80 73 aa7.05□□□□□ -1.28
GTF3C1-213ENST00000571886 FBLL1A6NHQ2 334 aaKnown RBP7.05□□□□□ -1.28
GTF3C1-213ENST00000571886 FABP5P3A8MUU1 101 aa7.05□□□□□ -1.28
GTF3C1-213ENST00000571886 KRBOX1C9JBD0 128 aa7.05□□□□□ -1.28
GTF3C1-213ENST00000571886 PPT1P50897 306 aa7.05□□□□□ -1.28
GTF3C1-213ENST00000571886 EIF5AP63241 154 aaKnown RBP7.05□□□□□ -1.28
GTF3C1-213ENST00000571886 COX8CQ7Z4L0 72 aa7.05□□□□□ -1.28
GTF3C1-213ENST00000571886 KRTAP1-5Q9BYS1 174 aa7.05□□□□□ -1.28
GTF3C1-213ENST00000571886 Q9H8V8 135 aa7.05□□□□□ -1.28
GTF3C1-213ENST00000571886 TRBV6-1A0A0K0K1D8 114 aa7.04□□□□□ -1.28
GTF3C1-213ENST00000571886 NBDYA0A0U1RRE5 68 aa7.04□□□□□ -1.28
GTF3C1-213ENST00000571886 SH2D1AO60880 128 aa7.04□□□□□ -1.28
GTF3C1-213ENST00000571886 LTAP01374 205 aa7.04□□□□□ -1.28
GTF3C1-213ENST00000571886 SULT1A2P50226 295 aa7.04□□□□□ -1.28
GTF3C1-213ENST00000571886 NHLRC2Q8NBF2 726 aa7.04□□□□□ -1.28
GTF3C1-213ENST00000571886 OR4C5Q8NGB2 326 aa7.04□□□□□ -1.28
GTF3C1-213ENST00000571886 FMC1Q96HJ9 113 aa7.04□□□□□ -1.28
GTF3C1-213ENST00000571886 MRPS16Q9Y3D3 137 aaKnown RBP7.04□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms