RNA–Protein interactions for RNA: ENST00000571562.1

NPLOC4-205, Transcript of NPL4 homolog, ubiquitin recognition factor, humanhuman

TSL 5

Gene NPLOC4, Length 301 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPLOC4-205ENST00000571562 PCBD1P61457 104 aa0.32□□□□□ -2.36
NPLOC4-205ENST00000571562 RPS28P62857 69 aaKnown RBP0.32□□□□□ -2.36
NPLOC4-205ENST00000571562 USP54Q70EL1 1684 aa0.32□□□□□ -2.36
NPLOC4-205ENST00000571562 FXYD1O00168 92 aa0.31□□□□□ -2.36
NPLOC4-205ENST00000571562 MT-ND4LP03901 98 aa0.31□□□□□ -2.36
NPLOC4-205ENST00000571562 TFF1P04155 84 aa0.31□□□□□ -2.36
NPLOC4-205ENST00000571562 SDC4P31431 198 aa0.31□□□□□ -2.36
NPLOC4-205ENST00000571562 RPL37P61927 97 aaKnown RBP0.31□□□□□ -2.36
NPLOC4-205ENST00000571562 Q5XG85 94 aa0.31□□□□□ -2.36
NPLOC4-205ENST00000571562 H0YJX3 145 aa0.3□□□□□ -2.36
NPLOC4-205ENST00000571562 CCKP06307 115 aa0.3□□□□□ -2.36
NPLOC4-205ENST00000571562 TMEM244Q5VVB8 128 aa0.3□□□□□ -2.36
NPLOC4-205ENST00000571562 TSKUQ8WUA8 353 aa0.3□□□□□ -2.36
NPLOC4-205ENST00000571562 DMAC1Q96GE9 116 aa0.3□□□□□ -2.36
NPLOC4-205ENST00000571562 ATG5Q9H1Y0 275 aa0.3□□□□□ -2.36
NPLOC4-205ENST00000571562 HELZP42694 1942 aaKnown RBP0.3□□□□□ -2.36
NPLOC4-205ENST00000571562 FAT4Q6V0I7 4981 aa0.3□□□□□ -2.36
NPLOC4-205ENST00000571562 MED13LQ71F56 2210 aa0.29□□□□□ -2.36
NPLOC4-205ENST00000571562 TSTD3H0UI37 97 aa0.29□□□□□ -2.36
NPLOC4-205ENST00000571562 NBEAP1P0C6P0 100 aa0.29□□□□□ -2.36
NPLOC4-205ENST00000571562 PSPHP78330 225 aa0.29□□□□□ -2.36
NPLOC4-205ENST00000571562 SKA2Q8WVK7 121 aaPredicted RBP0.29□□□□□ -2.36
NPLOC4-205ENST00000571562 GINS2Q9Y248 185 aa0.29□□□□□ -2.36
NPLOC4-205ENST00000571562 MUC5BQ9HC84 5762 aaPredicted RBP0.29□□□□□ -2.36
NPLOC4-205ENST00000571562 SIPA1L2Q9P2F8 1722 aaPredicted RBP0.29□□□□□ -2.36
NPLOC4-205ENST00000571562 MED23Q9ULK4 1368 aa0.29□□□□□ -2.36
NPLOC4-205ENST00000571562 ZCCHC11Q5TAX3 1644 aaKnown RBP0.28□□□□□ -2.36
NPLOC4-205ENST00000571562 SYNE1Q8NF91 8797 aaKnown RBP0.28□□□□□ -2.36
NPLOC4-205ENST00000571562 J3KT08 172 aa0.28□□□□□ -2.36
NPLOC4-205ENST00000571562 PAEPP09466 180 aa0.28□□□□□ -2.36
NPLOC4-205ENST00000571562 HSD17B12Q53GQ0 312 aa0.28□□□□□ -2.36
NPLOC4-205ENST00000571562 MRPL40Q9NQ50 206 aaKnown RBP0.28□□□□□ -2.36
NPLOC4-205ENST00000571562 HSPB11Q9Y547 144 aa0.28□□□□□ -2.36
NPLOC4-205ENST00000571562 AFDNP55196 1824 aaKnown RBP0.28□□□□□ -2.36
NPLOC4-205ENST00000571562 CPDO75976 1380 aa0.28□□□□□ -2.36
NPLOC4-205ENST00000571562 XIRP1Q702N8 1843 aaKnown RBP0.27□□□□□ -2.37
NPLOC4-205ENST00000571562 AHNAK2Q8IVF2 5795 aa0.27□□□□□ -2.37
NPLOC4-205ENST00000571562 A0A1B0GW64 132 aa0.27□□□□□ -2.37
NPLOC4-205ENST00000571562 GNG14A0A1W2PPG7 69 aa0.27□□□□□ -2.37
NPLOC4-205ENST00000571562 DPM2O94777 84 aa0.27□□□□□ -2.37
NPLOC4-205ENST00000571562 ADCYAP1P18509 176 aa0.27□□□□□ -2.37
NPLOC4-205ENST00000571562 UNQ5815/PRO19632Q6UWF5 114 aa0.27□□□□□ -2.37
NPLOC4-205ENST00000571562 OR8I2Q8N0Y5 310 aa0.27□□□□□ -2.37
NPLOC4-205ENST00000571562 OR4S1Q8NGB4 309 aa0.27□□□□□ -2.37
NPLOC4-205ENST00000571562 CALML5Q9NZT1 146 aa0.27□□□□□ -2.37
NPLOC4-205ENST00000571562 TPRP12270 2363 aaKnown RBP0.26□□□□□ -2.37
NPLOC4-205ENST00000571562 TRAV36DV7A0A075B6V5 113 aa0.26□□□□□ -2.37
NPLOC4-205ENST00000571562 TRAV17A0A0B4J275 112 aa0.26□□□□□ -2.37
NPLOC4-205ENST00000571562 DEGS1O15121 323 aa0.26□□□□□ -2.37
NPLOC4-205ENST00000571562 TNFSF15O95150 251 aa0.26□□□□□ -2.37
NPLOC4-205ENST00000571562 HIST1H1BP16401 226 aaKnown RBP0.26□□□□□ -2.37
NPLOC4-205ENST00000571562 POLR2JP52435 117 aaKnown RBP0.26□□□□□ -2.37
NPLOC4-205ENST00000571562 B2MP61769 119 aa0.26□□□□□ -2.37
NPLOC4-205ENST00000571562 SPINK6Q6UWN8 80 aa0.26□□□□□ -2.37
NPLOC4-205ENST00000571562 TMEM91Q6ZNR0 172 aa0.26□□□□□ -2.37
NPLOC4-205ENST00000571562 METTL1Q9UBP6 276 aaKnown RBP0.26□□□□□ -2.37
NPLOC4-205ENST00000571562 DNAJC15Q9Y5T4 150 aa0.26□□□□□ -2.37
NPLOC4-205ENST00000571562 MYO7AQ13402 2215 aa0.26□□□□□ -2.37
NPLOC4-205ENST00000571562 BCORL1Q5H9F3 1711 aa0.25□□□□□ -2.37
NPLOC4-205ENST00000571562 OVOS2A0A0G2JMS6 1433 aa0.25□□□□□ -2.37
NPLOC4-205ENST00000571562 CD3DP04234 171 aa0.25□□□□□ -2.37
NPLOC4-205ENST00000571562 CMPK1P30085 196 aa0.25□□□□□ -2.37
NPLOC4-205ENST00000571562 OR8B8Q15620 311 aa0.25□□□□□ -2.37
NPLOC4-205ENST00000571562 OTOGQ6ZRI0 2925 aa0.24□□□□□ -2.37
NPLOC4-205ENST00000571562 KCPQ6ZWJ8 1503 aa0.24□□□□□ -2.37
NPLOC4-205ENST00000571562 ZCCHC6Q5VYS8 1495 aaKnown RBP0.24□□□□□ -2.37
NPLOC4-205ENST00000571562 C9JAW5 83 aa0.24□□□□□ -2.37
NPLOC4-205ENST00000571562 KLKP1Q107X0 134 aa0.24□□□□□ -2.37
NPLOC4-205ENST00000571562 SLC25A26Q70HW3 274 aa0.24□□□□□ -2.37
NPLOC4-205ENST00000571562 TMEM14BQ9NUH8 114 aa0.24□□□□□ -2.37
NPLOC4-205ENST00000571562 HIGD1AQ9Y241 93 aa0.24□□□□□ -2.37
NPLOC4-205ENST00000571562 A0A096LNT2 108 aa0.23□□□□□ -2.37
NPLOC4-205ENST00000571562 PNMA8CA0A1B0GUJ8 204 aa0.23□□□□□ -2.37
NPLOC4-205ENST00000571562 CACNA1HO95180 2353 aa0.23□□□□□ -2.37
NPLOC4-205ENST00000571562 KIDINS220Q9ULH0 1771 aa0.22□□□□□ -2.37
NPLOC4-205ENST00000571562 TRBV10-1A0A0K0K1A3 114 aa0.22□□□□□ -2.37
NPLOC4-205ENST00000571562 CXorf51AA0A1B0GTR3 108 aa0.22□□□□□ -2.37
NPLOC4-205ENST00000571562 A0A1B0GX51 115 aa0.22□□□□□ -2.37
NPLOC4-205ENST00000571562 SMIM24O75264 130 aa0.22□□□□□ -2.37
NPLOC4-205ENST00000571562 PLGLB1Q02325 96 aa0.22□□□□□ -2.37
NPLOC4-205ENST00000571562 TAC4Q86UU9 113 aa0.22□□□□□ -2.37
NPLOC4-205ENST00000571562 BANF2Q9H503 90 aa0.22□□□□□ -2.37
NPLOC4-205ENST00000571562 IGF2RP11717 2491 aa0.22□□□□□ -2.37
NPLOC4-205ENST00000571562 PTPRGP23470 1445 aa0.21□□□□□ -2.38
NPLOC4-205ENST00000571562 LRP5O75197 1615 aa0.21□□□□□ -2.38
NPLOC4-205ENST00000571562 SCTP09683 121 aa0.21□□□□□ -2.38
NPLOC4-205ENST00000571562 MPC1LP0DKB6 136 aa0.21□□□□□ -2.38
NPLOC4-205ENST00000571562 HLA-DRB4P13762 266 aa0.21□□□□□ -2.38
NPLOC4-205ENST00000571562 AKR1D1P51857 326 aa0.21□□□□□ -2.38
NPLOC4-205ENST00000571562 TCTE3Q8IZS6 198 aa0.21□□□□□ -2.38
NPLOC4-205ENST00000571562 HLA-DRB4X5D2U9 266 aa0.21□□□□□ -2.38
NPLOC4-205ENST00000571562 RBBP6Q7Z6E9 1792 aaKnown RBP0.21□□□□□ -2.38
NPLOC4-205ENST00000571562 SLC35B3Q9H1N7 401 aa0.2□□□□□ -2.38
NPLOC4-205ENST00000571562 ARHGAP31Q2M1Z3 1444 aa0.2□□□□□ -2.38
NPLOC4-205ENST00000571562 MAST4O15021 2626 aa0.19□□□□□ -2.38
NPLOC4-205ENST00000571562 PTPRZ1P23471 2315 aaPredicted RBP0.19□□□□□ -2.38
NPLOC4-205ENST00000571562 TANC1Q9C0D5 1861 aa0.19□□□□□ -2.38
NPLOC4-205ENST00000571562 OR2H2O95918 312 aa0.19□□□□□ -2.38
NPLOC4-205ENST00000571562 CLLU1Q5K131 121 aa0.19□□□□□ -2.38
NPLOC4-205ENST00000571562 TMEM141Q96I45 108 aa0.19□□□□□ -2.38
Retrieved 100 of 20,778 RNA–protein pairs in 76.6 ms