RNA–Protein interactions for RNA: ENST00000571545.1

CIITA-207, Transcript of class II major histocompatibility complex transactivator, humanhuman

TSL 3

Gene CIITA, Length 567 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIITA-207ENST00000571545 FHL2Q14192 279 aa6.7□□□□□ -1.34
CIITA-207ENST00000571545 SPATA12Q7Z6I5 190 aa6.7□□□□□ -1.34
CIITA-207ENST00000571545 C10orf126Q8N4M7 172 aa6.7□□□□□ -1.34
CIITA-207ENST00000571545 INO80EQ8NBZ0 244 aaPredicted RBP6.7□□□□□ -1.34
CIITA-207ENST00000571545 C8orf49Q96NF6 230 aa6.7□□□□□ -1.34
CIITA-207ENST00000571545 KRTAP1-5Q9BYS1 174 aa6.7□□□□□ -1.34
CIITA-207ENST00000571545 TMEM167BQ9NRX6 74 aa6.7□□□□□ -1.34
CIITA-207ENST00000571545 MDFICQ9P1T7 246 aa6.7□□□□□ -1.34
CIITA-207ENST00000571545 ALG5Q9Y673 324 aa6.7□□□□□ -1.34
CIITA-207ENST00000571545 LY96Q9Y6Y9 160 aa6.7□□□□□ -1.34
CIITA-207ENST00000571545 BORCS7-ASMTA0A0B4J1R7 106 aa6.69□□□□□ -1.34
CIITA-207ENST00000571545 LOC100996750A0A140TA64 210 aa6.69□□□□□ -1.34
CIITA-207ENST00000571545 CXorf1O96002 111 aa6.69□□□□□ -1.34
CIITA-207ENST00000571545 GIPP09681 153 aaPredicted RBP6.69□□□□□ -1.34
CIITA-207ENST00000571545 STAG3L2P0CL84 134 aa6.69□□□□□ -1.34
CIITA-207ENST00000571545 STAG3L3P0CL85 134 aa6.69□□□□□ -1.34
CIITA-207ENST00000571545 EVI2AP22794 236 aa6.69□□□□□ -1.34
CIITA-207ENST00000571545 LINC00315P59091 139 aa6.69□□□□□ -1.34
CIITA-207ENST00000571545 CDPF1Q6NVV7 123 aa6.69□□□□□ -1.34
CIITA-207ENST00000571545 HSD17B11Q8NBQ5 300 aa6.69□□□□□ -1.34
CIITA-207ENST00000571545 OR4C5Q8NGB2 326 aa6.69□□□□□ -1.34
CIITA-207ENST00000571545 KRTAP17-1Q9BYP8 105 aa6.69□□□□□ -1.34
CIITA-207ENST00000571545 KRTAP4-6Q9BYQ5 205 aa6.69□□□□□ -1.34
CIITA-207ENST00000571545 SH3BGRL3Q9H299 93 aa6.69□□□□□ -1.34
CIITA-207ENST00000571545 WFDC1Q9HC57 220 aa6.69□□□□□ -1.34
CIITA-207ENST00000571545 PCLOQ9Y6V0 5065 aa6.68□□□□□ -1.34
CIITA-207ENST00000571545 IGHV3-16A0A0C4DH30 117 aa6.68□□□□□ -1.34
CIITA-207ENST00000571545 K7EQD1 137 aa6.68□□□□□ -1.34
CIITA-207ENST00000571545 TAAR5O14804 337 aa6.68□□□□□ -1.34
CIITA-207ENST00000571545 GYPEP15421 78 aa6.68□□□□□ -1.34
CIITA-207ENST00000571545 LYPD5Q6UWN5 251 aa6.68□□□□□ -1.34
CIITA-207ENST00000571545 ACTR3CQ9C0K3 210 aaPredicted RBP6.68□□□□□ -1.34
CIITA-207ENST00000571545 TNFSF18Q9UNG2 199 aa6.68□□□□□ -1.34
CIITA-207ENST00000571545 F6UZH7 168 aa6.67□□□□□ -1.34
CIITA-207ENST00000571545 HMGB3O15347 200 aaKnown RBP6.67□□□□□ -1.34
CIITA-207ENST00000571545 TCRAP04437 139 aa6.67□□□□□ -1.34
CIITA-207ENST00000571545 TYMSP04818 313 aa6.67□□□□□ -1.34
CIITA-207ENST00000571545 PFN1P07737 140 aaKnown RBP6.67□□□□□ -1.34
CIITA-207ENST00000571545 SFTA3P0C7M3 94 aa6.67□□□□□ -1.34
CIITA-207ENST00000571545 ATP6V0CP27449 155 aa6.67□□□□□ -1.34
CIITA-207ENST00000571545 GCHFRP30047 84 aa6.67□□□□□ -1.34
CIITA-207ENST00000571545 PPT1P50897 306 aa6.67□□□□□ -1.34
CIITA-207ENST00000571545 TIRAPP58753 221 aa6.67□□□□□ -1.34
CIITA-207ENST00000571545 SMUG1Q53HV7 270 aa6.67□□□□□ -1.34
CIITA-207ENST00000571545 SAPCD1Q5SSQ6 148 aa6.67□□□□□ -1.34
CIITA-207ENST00000571545 Q6ZQT7 251 aa6.67□□□□□ -1.34
CIITA-207ENST00000571545 CYB561D1Q8N8Q1 229 aa6.67□□□□□ -1.34
CIITA-207ENST00000571545 TMEM75Q8N9X5 138 aa6.67□□□□□ -1.34
CIITA-207ENST00000571545 SUN5Q8TC36 379 aa6.67□□□□□ -1.34
CIITA-207ENST00000571545 RAB24Q969Q5 203 aa6.67□□□□□ -1.34
CIITA-207ENST00000571545 ZNF479Q96JC4 524 aa6.67□□□□□ -1.34
CIITA-207ENST00000571545 PRADC1Q9BSG0 188 aa6.67□□□□□ -1.34
CIITA-207ENST00000571545 NKX6-2Q9C056 277 aaPredicted RBP6.67□□□□□ -1.34
CIITA-207ENST00000571545 PKHD1P08F94 4074 aa6.67□□□□□ -1.34
CIITA-207ENST00000571545 TRAV8-1A0A0A6YYK1 113 aa6.66□□□□□ -1.34
CIITA-207ENST00000571545 A0A1W2PRE2 83 aa6.66□□□□□ -1.34
CIITA-207ENST00000571545 DNAH10OSP0CZ25 163 aa6.66□□□□□ -1.34
CIITA-207ENST00000571545 GNG5P63218 68 aa6.66□□□□□ -1.34
CIITA-207ENST00000571545 FLI1Q01543 452 aaPredicted RBP6.66□□□□□ -1.34
CIITA-207ENST00000571545 RHOHQ15669 191 aa6.66□□□□□ -1.34
CIITA-207ENST00000571545 NHLRC2Q8NBF2 726 aa6.66□□□□□ -1.34
CIITA-207ENST00000571545 PTH2Q96A98 100 aa6.66□□□□□ -1.34
CIITA-207ENST00000571545 TRBV6-4A0A1B0GX49 114 aa6.65□□□□□ -1.34
CIITA-207ENST00000571545 GNRH2O43555 120 aa6.65□□□□□ -1.34
CIITA-207ENST00000571545 GCGP01275 180 aa6.65□□□□□ -1.34
CIITA-207ENST00000571545 MGST1P10620 155 aaKnown RBP6.65□□□□□ -1.34
CIITA-207ENST00000571545 GATA1P15976 413 aaPredicted RBP6.65□□□□□ -1.34
CIITA-207ENST00000571545 ZNF876PQ49A33 203 aa6.65□□□□□ -1.34
CIITA-207ENST00000571545 PIK3CD-AS1Q5SR53 167 aa6.65□□□□□ -1.34
CIITA-207ENST00000571545 Q6ZRN7 208 aaPredicted RBP6.65□□□□□ -1.34
CIITA-207ENST00000571545 MAPKAPK5-AS1Q8N8E1 139 aa6.65□□□□□ -1.34
CIITA-207ENST00000571545 MSRB1Q9NZV6 116 aa6.65□□□□□ -1.34
CIITA-207ENST00000571545 EPDR1Q9UM22 224 aa6.65□□□□□ -1.34
CIITA-207ENST00000571545 PSG8Q9UQ74 426 aa6.65□□□□□ -1.34
CIITA-207ENST00000571545 FXYD6-FXYD2A0A087WZ82 144 aa6.64□□□□□ -1.35
CIITA-207ENST00000571545 TRAV8-6A0A0B4J262 113 aa6.64□□□□□ -1.35
CIITA-207ENST00000571545 CTXND1A0A1B0GTU2 59 aa6.64□□□□□ -1.35
CIITA-207ENST00000571545 GGTLC3B5MD39 225 aa6.64□□□□□ -1.35
CIITA-207ENST00000571545 FAM229AH3BQW9 127 aa6.64□□□□□ -1.35
CIITA-207ENST00000571545 S100A4P26447 101 aaKnown RBP6.64□□□□□ -1.35
CIITA-207ENST00000571545 SUMO1P63165 101 aaKnown RBP6.64□□□□□ -1.35
CIITA-207ENST00000571545 AKR1C8PQ5T2L2 129 aa6.64□□□□□ -1.35
CIITA-207ENST00000571545 TVP23CQ96ET8 276 aa6.64□□□□□ -1.35
CIITA-207ENST00000571545 TCEAL7Q9BRU2 100 aa6.64□□□□□ -1.35
CIITA-207ENST00000571545 FAT2Q9NYQ8 4349 aa6.64□□□□□ -1.35
CIITA-207ENST00000571545 IGHV3-38A0A0C4DH36 116 aa6.63□□□□□ -1.35
CIITA-207ENST00000571545 EIF3GO75821 320 aaKnown RBP eCLIP6.63□□□□□ -1.35
CIITA-207ENST00000571545 IFNA7P01567 189 aa6.63□□□□□ -1.35
CIITA-207ENST00000571545 CRYGDP07320 174 aa6.63□□□□□ -1.35
CIITA-207ENST00000571545 PRNTQ86SH4 94 aa6.63□□□□□ -1.35
CIITA-207ENST00000571545 WFDC10BQ8IUB3 73 aa6.63□□□□□ -1.35
CIITA-207ENST00000571545 Q8N1X5 172 aa6.63□□□□□ -1.35
CIITA-207ENST00000571545 OR2T35Q8NGX2 323 aa6.63□□□□□ -1.35
CIITA-207ENST00000571545 HIST1H2BAQ96A08 127 aa6.63□□□□□ -1.35
CIITA-207ENST00000571545 C9orf85Q96MD7 179 aa6.63□□□□□ -1.35
CIITA-207ENST00000571545 DNAH17Q9UFH2 4485 aa6.62□□□□□ -1.35
CIITA-207ENST00000571545 DNAH2Q9P225 4427 aa6.62□□□□□ -1.35
CIITA-207ENST00000571545 RNF222A6NCQ9 220 aa6.62□□□□□ -1.35
CIITA-207ENST00000571545 A8MWV9 139 aa6.62□□□□□ -1.35
CIITA-207ENST00000571545 RS1O15537 224 aa6.62□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 57.6 ms