RNA–Protein interactions for RNA: ENST00000569990.2

HCCAT5-201, hepatocellular carcinoma associated transcript 5, humanhuman

TSL 1 (best) BASIC

Gene HCCAT5, Length 1,079 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HCCAT5-201ENST00000569990 IGHV4-4A0A075B6R2 117 aa6.78□□□□□ -1.32
HCCAT5-201ENST00000569990 TRAV21A0A0B4J279 112 aa6.78□□□□□ -1.32
HCCAT5-201ENST00000569990 TMEM238LA0A1B0GVL6 79 aa6.78□□□□□ -1.32
HCCAT5-201ENST00000569990 HTN3P15516 51 aa6.78□□□□□ -1.32
HCCAT5-201ENST00000569990 ZNF80P51504 273 aaPredicted RBP6.78□□□□□ -1.32
HCCAT5-201ENST00000569990 TCL1AP56279 114 aa6.78□□□□□ -1.32
HCCAT5-201ENST00000569990 CCL20P78556 96 aa6.78□□□□□ -1.32
HCCAT5-201ENST00000569990 TDRG1Q3Y452 100 aa6.78□□□□□ -1.32
HCCAT5-201ENST00000569990 SMUG1Q53HV7 270 aa6.78□□□□□ -1.32
HCCAT5-201ENST00000569990 SAPCD1Q5SSQ6 148 aa6.78□□□□□ -1.32
HCCAT5-201ENST00000569990 FAM159AQ6UWV7 190 aa6.78□□□□□ -1.32
HCCAT5-201ENST00000569990 Q86TA4 180 aa6.78□□□□□ -1.32
HCCAT5-201ENST00000569990 LINC00476Q8WZB0 136 aa6.78□□□□□ -1.32
HCCAT5-201ENST00000569990 C8orf49Q96NF6 230 aa6.78□□□□□ -1.32
HCCAT5-201ENST00000569990 APLNQ9ULZ1 77 aa6.78□□□□□ -1.32
HCCAT5-201ENST00000569990 KLF12Q9Y4X4 402 aa6.78□□□□□ -1.32
HCCAT5-201ENST00000569990 LYSTQ99698 3801 aa6.77□□□□□ -1.33
HCCAT5-201ENST00000569990 ALMS1Q8TCU4 4167 aa6.77□□□□□ -1.33
HCCAT5-201ENST00000569990 GAGE12BA1L429 117 aa6.77□□□□□ -1.33
HCCAT5-201ENST00000569990 TEX46H3BTG2 121 aa6.77□□□□□ -1.33
HCCAT5-201ENST00000569990 GAGE7O76087 117 aa6.77□□□□□ -1.33
HCCAT5-201ENST00000569990 GCGP01275 180 aa6.77□□□□□ -1.33
HCCAT5-201ENST00000569990 ATP5G1P05496 136 aa6.77□□□□□ -1.33
HCCAT5-201ENST00000569990 GAGE12FP0CL80 117 aa6.77□□□□□ -1.33
HCCAT5-201ENST00000569990 GAGE12GP0CL81 117 aa6.77□□□□□ -1.33
HCCAT5-201ENST00000569990 GAGE12IP0CL82 117 aa6.77□□□□□ -1.33
HCCAT5-201ENST00000569990 ZNF415Q09FC8 603 aa6.77□□□□□ -1.33
HCCAT5-201ENST00000569990 Q6ZTI0 123 aa6.77□□□□□ -1.33
HCCAT5-201ENST00000569990 FAM210BQ96KR6 192 aa6.77□□□□□ -1.33
HCCAT5-201ENST00000569990 MANBALQ9NQG1 85 aa6.77□□□□□ -1.33
HCCAT5-201ENST00000569990 GNG13Q9P2W3 67 aa6.77□□□□□ -1.33
HCCAT5-201ENST00000569990 NAGKQ9UJ70 344 aa6.77□□□□□ -1.33
HCCAT5-201ENST00000569990 DNAH1Q9P2D7 4330 aa6.77□□□□□ -1.33
HCCAT5-201ENST00000569990 TRGV11A0A075B6L2 103 aa6.76□□□□□ -1.33
HCCAT5-201ENST00000569990 TRBV6-1A0A0K0K1D8 114 aa6.76□□□□□ -1.33
HCCAT5-201ENST00000569990 SPINK4O60575 86 aa6.76□□□□□ -1.33
HCCAT5-201ENST00000569990 PFN1P07737 140 aaKnown RBP6.76□□□□□ -1.33
HCCAT5-201ENST00000569990 AKR1C3P42330 323 aa6.76□□□□□ -1.33
HCCAT5-201ENST00000569990 UBE2G1P62253 170 aa6.76□□□□□ -1.33
HCCAT5-201ENST00000569990 CTAG1AP78358 180 aa6.76□□□□□ -1.33
HCCAT5-201ENST00000569990 TMEM183BQ1AE95 376 aa6.76□□□□□ -1.33
HCCAT5-201ENST00000569990 ALKAL2Q6UX46 152 aa6.76□□□□□ -1.33
HCCAT5-201ENST00000569990 TMEM183AQ8IXX5 376 aa6.76□□□□□ -1.33
HCCAT5-201ENST00000569990 SLC7A5P1Q8MH63 180 aa6.76□□□□□ -1.33
HCCAT5-201ENST00000569990 FMC1Q96HJ9 113 aa6.76□□□□□ -1.33
HCCAT5-201ENST00000569990 MDFICQ9P1T7 246 aa6.76□□□□□ -1.33
HCCAT5-201ENST00000569990 C11orf21Q9P2W6 132 aa6.76□□□□□ -1.33
HCCAT5-201ENST00000569990 ZFP30Q9Y2G7 519 aa6.76□□□□□ -1.33
HCCAT5-201ENST00000569990 TRGV1A0A0A0MS02 117 aa6.75□□□□□ -1.33
HCCAT5-201ENST00000569990 IGHV3-16A0A0C4DH30 117 aa6.75□□□□□ -1.33
HCCAT5-201ENST00000569990 F5H768 121 aa6.75□□□□□ -1.33
HCCAT5-201ENST00000569990 GNRH2O43555 120 aa6.75□□□□□ -1.33
HCCAT5-201ENST00000569990 ATP6V1G1O75348 118 aa6.75□□□□□ -1.33
HCCAT5-201ENST00000569990 LY6G6CO95867 125 aa6.75□□□□□ -1.33
HCCAT5-201ENST00000569990 TYMSP04818 313 aa6.75□□□□□ -1.33
HCCAT5-201ENST00000569990 LGALS9BQ3B8N2 356 aa6.75□□□□□ -1.33
HCCAT5-201ENST00000569990 LGALS9CQ6DKI2 356 aa6.75□□□□□ -1.33
HCCAT5-201ENST00000569990 TMEM88Q6PEY1 159 aa6.75□□□□□ -1.33
HCCAT5-201ENST00000569990 COX8CQ7Z4L0 72 aa6.75□□□□□ -1.33
HCCAT5-201ENST00000569990 KCNS1Q96KK3 526 aa6.75□□□□□ -1.33
HCCAT5-201ENST00000569990 C18orf15Q96N68 181 aa6.75□□□□□ -1.33
HCCAT5-201ENST00000569990 NDUFAF3Q9BU61 184 aa6.75□□□□□ -1.33
HCCAT5-201ENST00000569990 SDF2L1Q9HCN8 221 aa6.75□□□□□ -1.33
HCCAT5-201ENST00000569990 LTAP01374 205 aa6.74□□□□□ -1.33
HCCAT5-201ENST00000569990 S100A9P06702 114 aaKnown RBP6.74□□□□□ -1.33
HCCAT5-201ENST00000569990 CRIP1P50238 77 aa6.74□□□□□ -1.33
HCCAT5-201ENST00000569990 C11orf52Q96A22 123 aa6.74□□□□□ -1.33
HCCAT5-201ENST00000569990 ZC2HC1AQ96GY0 325 aa6.74□□□□□ -1.33
HCCAT5-201ENST00000569990 TXNDC17Q9BRA2 123 aa6.74□□□□□ -1.33
HCCAT5-201ENST00000569990 SPXQ9BT56 116 aa6.74□□□□□ -1.33
HCCAT5-201ENST00000569990 MRPL16Q9NX20 251 aaKnown RBP6.74□□□□□ -1.33
HCCAT5-201ENST00000569990 RYR3Q15413 4870 aa6.73□□□□□ -1.33
HCCAT5-201ENST00000569990 TRGV2A0A075B6R0 118 aa6.73□□□□□ -1.33
HCCAT5-201ENST00000569990 FABP5P3A8MUU1 101 aa6.73□□□□□ -1.33
HCCAT5-201ENST00000569990 IFNA1P01562 189 aa6.73□□□□□ -1.33
HCCAT5-201ENST00000569990 BCL2P10415 239 aa6.73□□□□□ -1.33
HCCAT5-201ENST00000569990 HOXA5P20719 270 aa6.73□□□□□ -1.33
HCCAT5-201ENST00000569990 BLOC1S1P78537 153 aa6.73□□□□□ -1.33
HCCAT5-201ENST00000569990 MEF2BQ02080 365 aaPredicted RBP6.73□□□□□ -1.33
HCCAT5-201ENST00000569990 IGKV3D-20A0A0C4DH25 116 aa6.72□□□□□ -1.33
HCCAT5-201ENST00000569990 PDE6DO43924 150 aa6.72□□□□□ -1.33
HCCAT5-201ENST00000569990 SH2D1AO60880 128 aa6.72□□□□□ -1.33
HCCAT5-201ENST00000569990 TAGLN2P37802 199 aaKnown RBP6.72□□□□□ -1.33
HCCAT5-201ENST00000569990 ZNF674Q2M3X9 581 aa6.72□□□□□ -1.33
HCCAT5-201ENST00000569990 FAM162BQ5T6X4 162 aa6.72□□□□□ -1.33
HCCAT5-201ENST00000569990 C15orf53Q8NAA6 179 aa6.72□□□□□ -1.33
HCCAT5-201ENST00000569990 LYPD6BQ8NI32 183 aa6.72□□□□□ -1.33
HCCAT5-201ENST00000569990 RASL10AQ92737 203 aa6.72□□□□□ -1.33
HCCAT5-201ENST00000569990 DERL1Q9BUN8 251 aa6.72□□□□□ -1.33
HCCAT5-201ENST00000569990 MLST8Q9BVC4 326 aa6.72□□□□□ -1.33
HCCAT5-201ENST00000569990 VAX2Q9UIW0 290 aa6.72□□□□□ -1.33
HCCAT5-201ENST00000569990 VPS13DQ5THJ4 4388 aa6.71□□□□□ -1.33
HCCAT5-201ENST00000569990 M0R2P5 195 aa6.71□□□□□ -1.34
HCCAT5-201ENST00000569990 S100A6P06703 90 aa6.71□□□□□ -1.34
HCCAT5-201ENST00000569990 RNASE3P12724 160 aaKnown RBP6.71□□□□□ -1.34
HCCAT5-201ENST00000569990 RPL35P42766 123 aaKnown RBP6.71□□□□□ -1.34
HCCAT5-201ENST00000569990 OR5I1Q13606 314 aa6.71□□□□□ -1.34
HCCAT5-201ENST00000569990 BAGE2Q86Y30 109 aa6.71□□□□□ -1.34
HCCAT5-201ENST00000569990 NHLRC2Q8NBF2 726 aa6.71□□□□□ -1.34
HCCAT5-201ENST00000569990 C9orf85Q96MD7 179 aa6.71□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 62.7 ms