RNA–Protein interactions for RNA: ENST00000569919.1

UBFD1-209, Transcript of ubiquitin family domain containing 1, humanhuman

TSL 5

Gene UBFD1, Length 739 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBFD1-209ENST00000569919 SHANK2-AS3Q9BTD1 123 aa3.87□□□□□ -1.79
UBFD1-209ENST00000569919 C14orf166Q9Y224 244 aaKnown RBP3.87□□□□□ -1.79
UBFD1-209ENST00000569919 HIGD1AQ9Y241 93 aa3.87□□□□□ -1.79
UBFD1-209ENST00000569919 KCNIP3Q9Y2W7 256 aa3.87□□□□□ -1.79
UBFD1-209ENST00000569919 KLF12Q9Y4X4 402 aa3.87□□□□□ -1.79
UBFD1-209ENST00000569919 TRAV8-6A0A0B4J262 113 aa3.86□□□□□ -1.79
UBFD1-209ENST00000569919 LOC100506127A0A0U1RQW1 187 aa3.86□□□□□ -1.79
UBFD1-209ENST00000569919 RBFOX3A6NFN3 312 aa3.86□□□□□ -1.79
UBFD1-209ENST00000569919 HYPMO75409 117 aa3.86□□□□□ -1.79
UBFD1-209ENST00000569919 IGHV3-53P01767 116 aa3.86□□□□□ -1.79
UBFD1-209ENST00000569919 OR5G3P0C626 314 aa3.86□□□□□ -1.79
UBFD1-209ENST00000569919 STAG3L3P0CL85 134 aa3.86□□□□□ -1.79
UBFD1-209ENST00000569919 TBPP20226 339 aa3.86□□□□□ -1.79
UBFD1-209ENST00000569919 AQP4P55087 323 aa3.86□□□□□ -1.79
UBFD1-209ENST00000569919 TCL1AP56279 114 aa3.86□□□□□ -1.79
UBFD1-209ENST00000569919 PLP1P60201 277 aa3.86□□□□□ -1.79
UBFD1-209ENST00000569919 SMCO1Q147U7 214 aa3.86□□□□□ -1.79
UBFD1-209ENST00000569919 HIGD2BQ4VC39 106 aa3.86□□□□□ -1.79
UBFD1-209ENST00000569919 LCN15Q6UWW0 184 aa3.86□□□□□ -1.79
UBFD1-209ENST00000569919 ACOT7LQ6ZUV0 252 aa3.86□□□□□ -1.79
UBFD1-209ENST00000569919 OR13C8Q8NGS7 320 aa3.86□□□□□ -1.79
UBFD1-209ENST00000569919 MARCH1Q8TCQ1 289 aa3.86□□□□□ -1.79
UBFD1-209ENST00000569919 BLNKQ8WV28 456 aa3.86□□□□□ -1.79
UBFD1-209ENST00000569919 PARD6GQ9BYG4 376 aaPredicted RBP3.86□□□□□ -1.79
UBFD1-209ENST00000569919 SLC25A31Q9H0C2 315 aa3.86□□□□□ -1.79
UBFD1-209ENST00000569919 NAA60Q9H7X0 242 aa3.86□□□□□ -1.79
UBFD1-209ENST00000569919 ZNF331Q9NQX6 463 aaPredicted RBP3.86□□□□□ -1.79
UBFD1-209ENST00000569919 PAIP2BQ9ULR5 123 aaKnown RBP3.86□□□□□ -1.79
UBFD1-209ENST00000569919 HMCN2Q8NDA2 5059 aa3.86□□□□□ -1.79
UBFD1-209ENST00000569919 IGLV2-33A0A075B6J2 118 aaPredicted RBP3.85□□□□□ -1.79
UBFD1-209ENST00000569919 C9JCJ5 164 aa3.85□□□□□ -1.79
UBFD1-209ENST00000569919 MPDU1O75352 247 aa3.85□□□□□ -1.79
UBFD1-209ENST00000569919 APOA1P02647 267 aa3.85□□□□□ -1.79
UBFD1-209ENST00000569919 CD3DP04234 171 aa3.85□□□□□ -1.79
UBFD1-209ENST00000569919 IL5P05113 134 aa3.85□□□□□ -1.79
UBFD1-209ENST00000569919 CT45A10P0DMU9 189 aa3.85□□□□□ -1.79
UBFD1-209ENST00000569919 PRB4P10163 310 aaPredicted RBP3.85□□□□□ -1.79
UBFD1-209ENST00000569919 GABARAPL2P60520 117 aa3.85□□□□□ -1.79
UBFD1-209ENST00000569919 SELENOTP62341 195 aa3.85□□□□□ -1.79
UBFD1-209ENST00000569919 LAGE3Q14657 143 aa3.85□□□□□ -1.79
UBFD1-209ENST00000569919 SURF2Q15527 256 aaPredicted RBP3.85□□□□□ -1.79
UBFD1-209ENST00000569919 SCGB2B2Q4G0G5 96 aa3.85□□□□□ -1.79
UBFD1-209ENST00000569919 SNX29P2Q8IUI4 249 aa3.85□□□□□ -1.79
UBFD1-209ENST00000569919 Q8N976 141 aa3.85□□□□□ -1.79
UBFD1-209ENST00000569919 RTBDNQ9BSG5 229 aaPredicted RBP3.85□□□□□ -1.79
UBFD1-209ENST00000569919 PAXXQ9BUH6 204 aa3.85□□□□□ -1.79
UBFD1-209ENST00000569919 TRAV8-3A0A0A6YYJ7 113 aa3.84□□□□□ -1.79
UBFD1-209ENST00000569919 A0A0B4J2A0 478 aa3.84□□□□□ -1.79
UBFD1-209ENST00000569919 PIGBOS1A0A0B4J2F0 54 aa3.84□□□□□ -1.79
UBFD1-209ENST00000569919 C7orf71A4D174 169 aa3.84□□□□□ -1.79
UBFD1-209ENST00000569919 MED6O75586 246 aa3.84□□□□□ -1.79
UBFD1-209ENST00000569919 RAB3DO95716 219 aa3.84□□□□□ -1.79
UBFD1-209ENST00000569919 PFN1P07737 140 aaKnown RBP3.84□□□□□ -1.79
UBFD1-209ENST00000569919 HNRNPA3P51991 378 aaKnown RBP3.84□□□□□ -1.79
UBFD1-209ENST00000569919 AKR1C1Q04828 323 aa3.84□□□□□ -1.79
UBFD1-209ENST00000569919 LINC01620Q4KN68 170 aa3.84□□□□□ -1.79
UBFD1-209ENST00000569919 CYP2G1PQ6ZSU1 146 aa3.84□□□□□ -1.79
UBFD1-209ENST00000569919 BPIFA4PQ86YQ2 179 aa3.84□□□□□ -1.79
UBFD1-209ENST00000569919 OR51S1Q8NGJ8 323 aa3.84□□□□□ -1.79
UBFD1-209ENST00000569919 SUN5Q8TC36 379 aa3.84□□□□□ -1.79
UBFD1-209ENST00000569919 LINC00477Q96M19 166 aa3.84□□□□□ -1.79
UBFD1-209ENST00000569919 CNBD2Q96M20 576 aa3.84□□□□□ -1.79
UBFD1-209ENST00000569919 CIB3Q96Q77 187 aaPredicted RBP3.84□□□□□ -1.79
UBFD1-209ENST00000569919 DPH3P1Q9H4G8 78 aa3.84□□□□□ -1.79
UBFD1-209ENST00000569919 MRPL16Q9NX20 251 aaKnown RBP3.84□□□□□ -1.79
UBFD1-209ENST00000569919 MTFP1Q9UDX5 166 aa3.84□□□□□ -1.79
UBFD1-209ENST00000569919 SHPKQ9UHJ6 478 aa3.84□□□□□ -1.79
UBFD1-209ENST00000569919 PXMP4Q9Y6I8 212 aa3.84□□□□□ -1.79
UBFD1-209ENST00000569919 KLLNB2CW77 178 aa3.83□□□□□ -1.8
UBFD1-209ENST00000569919 MRPS12O15235 138 aaKnown RBP3.83□□□□□ -1.8
UBFD1-209ENST00000569919 IGHV3-30P01768 117 aa3.83□□□□□ -1.8
UBFD1-209ENST00000569919 IGHV3-33P01772 117 aa3.83□□□□□ -1.8
UBFD1-209ENST00000569919 GPX1P07203 203 aa3.83□□□□□ -1.8
UBFD1-209ENST00000569919 NMBP08949 121 aa3.83□□□□□ -1.8
UBFD1-209ENST00000569919 LINC00869P0C866 280 aa3.83□□□□□ -1.8
UBFD1-209ENST00000569919 IGHV3-30-3P0DP02 117 aa3.83□□□□□ -1.8
UBFD1-209ENST00000569919 IGHV3-30-5P0DP03 117 aa3.83□□□□□ -1.8
UBFD1-209ENST00000569919 ANXA3P12429 323 aa3.83□□□□□ -1.8
UBFD1-209ENST00000569919 RNASE4P34096 147 aaKnown RBP3.83□□□□□ -1.8
UBFD1-209ENST00000569919 PPT1P50897 306 aa3.83□□□□□ -1.8
UBFD1-209ENST00000569919 TAS2R19P59542 299 aa3.83□□□□□ -1.8
UBFD1-209ENST00000569919 WFDC2Q14508 124 aa3.83□□□□□ -1.8
UBFD1-209ENST00000569919 OR10J3Q5JRS4 329 aa3.83□□□□□ -1.8
UBFD1-209ENST00000569919 LYZL2Q7Z4W2 148 aa3.83□□□□□ -1.8
UBFD1-209ENST00000569919 TMEM229BQ8NBD8 167 aa3.83□□□□□ -1.8
UBFD1-209ENST00000569919 HSD17B11Q8NBQ5 300 aa3.83□□□□□ -1.8
UBFD1-209ENST00000569919 OR10G4Q8NGN3 311 aa3.83□□□□□ -1.8
UBFD1-209ENST00000569919 C15orf40Q8WUR7 153 aa3.83□□□□□ -1.8
UBFD1-209ENST00000569919 ARL6Q9H0F7 186 aa3.83□□□□□ -1.8
UBFD1-209ENST00000569919 COMMD3Q9UBI1 195 aa3.83□□□□□ -1.8
UBFD1-209ENST00000569919 IGHV1OR15-1A0A075B7D0 117 aa3.82□□□□□ -1.8
UBFD1-209ENST00000569919 A0A0D9SG52 128 aa3.82□□□□□ -1.8
UBFD1-209ENST00000569919 FABP12A6NFH5 140 aa3.82□□□□□ -1.8
UBFD1-209ENST00000569919 FAM74A7A6NL05 159 aa3.82□□□□□ -1.8
UBFD1-209ENST00000569919 DISC1C4P0D8 188 aa3.82□□□□□ -1.8
UBFD1-209ENST00000569919 WRBO00258 174 aa3.82□□□□□ -1.8
UBFD1-209ENST00000569919 LECT2O14960 151 aa3.82□□□□□ -1.8
UBFD1-209ENST00000569919 PITX3O75364 302 aa3.82□□□□□ -1.8
UBFD1-209ENST00000569919 SFTA3P0C7M3 94 aa3.82□□□□□ -1.8
UBFD1-209ENST00000569919 IAPPP10997 89 aa3.82□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 57.2 ms