RNA–Protein interactions for RNA: ENST00000569794.1

CHD9-220, Transcript of chromodomain helicase DNA binding protein 9, humanhuman

TSL 5

Gene CHD9, Length 485 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD9-220ENST00000569794 CCL4L1Q8NHW4 92 aa2.68□□□□□ -1.98
CHD9-220ENST00000569794 OTOSQ8NHW6 89 aa2.68□□□□□ -1.98
CHD9-220ENST00000569794 NAA60Q9H7X0 242 aa2.68□□□□□ -1.98
CHD9-220ENST00000569794 NRXN1Q9ULB1 1477 aa2.68□□□□□ -1.98
CHD9-220ENST00000569794 TRANK1O15050 2925 aa2.68□□□□□ -1.98
CHD9-220ENST00000569794 ZNF407Q9C0G0 2248 aa2.68□□□□□ -1.98
CHD9-220ENST00000569794 VIRMAQ69YN4 1812 aaKnown RBP2.68□□□□□ -1.98
CHD9-220ENST00000569794 NRAPQ86VF7 1730 aa2.68□□□□□ -1.98
CHD9-220ENST00000569794 NALCNQ8IZF0 1738 aa2.68□□□□□ -1.98
CHD9-220ENST00000569794 TRPM3Q9HCF6 1732 aaPredicted RBP2.68□□□□□ -1.98
CHD9-220ENST00000569794 CASKIN1Q8WXD9 1431 aa2.68□□□□□ -1.98
CHD9-220ENST00000569794 ZFHX4Q86UP3 3567 aa2.67□□□□□ -1.98
CHD9-220ENST00000569794 CASP8AP2Q9UKL3 1982 aa2.67□□□□□ -1.98
CHD9-220ENST00000569794 COL1A1P02452 1464 aaPredicted RBP2.67□□□□□ -1.98
CHD9-220ENST00000569794 TMSB15BA0A087X1C1 80 aa2.67□□□□□ -1.98
CHD9-220ENST00000569794 IGHV1-24A0A0C4DH33 117 aa2.67□□□□□ -1.98
CHD9-220ENST00000569794 B4DSR2 109 aa2.67□□□□□ -1.98
CHD9-220ENST00000569794 BTG2P78543 158 aa2.67□□□□□ -1.98
CHD9-220ENST00000569794 CDK6Q00534 326 aa2.67□□□□□ -1.98
CHD9-220ENST00000569794 HSD52Q0P140 79 aa2.67□□□□□ -1.98
CHD9-220ENST00000569794 ZNF846Q147U1 533 aa2.67□□□□□ -1.98
CHD9-220ENST00000569794 DEFB134Q4QY38 66 aa2.67□□□□□ -1.98
CHD9-220ENST00000569794 C1orf134Q5TEV5 83 aa2.67□□□□□ -1.98
CHD9-220ENST00000569794 MRPL54Q6P161 138 aaKnown RBP2.67□□□□□ -1.98
CHD9-220ENST00000569794 GKN2Q86XP6 184 aa2.67□□□□□ -1.98
CHD9-220ENST00000569794 Q8N814 137 aa2.67□□□□□ -1.98
CHD9-220ENST00000569794 SLC50A1Q9BRV3 221 aa2.67□□□□□ -1.98
CHD9-220ENST00000569794 SPANXDQ9BXN6 97 aa2.67□□□□□ -1.98
CHD9-220ENST00000569794 AGPAT4-IT1Q9H0P7 198 aa2.67□□□□□ -1.98
CHD9-220ENST00000569794 NDUFB11Q9NX14 153 aa2.67□□□□□ -1.98
CHD9-220ENST00000569794 COL24A1Q17RW2 1714 aa2.67□□□□□ -1.98
CHD9-220ENST00000569794 MYOM3Q5VTT5 1437 aa2.67□□□□□ -1.98
CHD9-220ENST00000569794 RGPD3A6NKT7 1758 aaPredicted RBP2.66□□□□□ -1.98
CHD9-220ENST00000569794 RGPD4Q7Z3J3 1758 aa2.66□□□□□ -1.98
CHD9-220ENST00000569794 PCM1Q15154 2024 aa2.66□□□□□ -1.98
CHD9-220ENST00000569794 DENND4CQ5VZ89 1909 aa2.66□□□□□ -1.98
CHD9-220ENST00000569794 PEAK1Q9H792 1746 aa2.66□□□□□ -1.98
CHD9-220ENST00000569794 FMN2Q9NZ56 1722 aa2.66□□□□□ -1.98
CHD9-220ENST00000569794 C3orf85A0A1B0GTC6 90 aa2.66□□□□□ -1.98
CHD9-220ENST00000569794 G3V3Q6 166 aa2.66□□□□□ -1.98
CHD9-220ENST00000569794 IGLV1-51P01701 117 aa2.66□□□□□ -1.98
CHD9-220ENST00000569794 BAALC-AS2P0C853 105 aa2.66□□□□□ -1.98
CHD9-220ENST00000569794 CCL4P13236 92 aa2.66□□□□□ -1.98
CHD9-220ENST00000569794 ROMO1P60602 79 aa2.66□□□□□ -1.98
CHD9-220ENST00000569794 S100A10P60903 97 aa2.66□□□□□ -1.98
CHD9-220ENST00000569794 LY6EQ16553 131 aa2.66□□□□□ -1.98
CHD9-220ENST00000569794 ZNF791Q3KP31 576 aaPredicted RBP2.66□□□□□ -1.98
CHD9-220ENST00000569794 MIC13Q5XKP0 118 aa2.66□□□□□ -1.98
CHD9-220ENST00000569794 TAS2R8Q9NYW2 309 aa2.66□□□□□ -1.98
CHD9-220ENST00000569794 IER3IP1Q9Y5U9 82 aa2.66□□□□□ -1.98
CHD9-220ENST00000569794 PAPPAQ13219 1627 aa2.66□□□□□ -1.98
CHD9-220ENST00000569794 ZNF638Q14966 1978 aaKnown RBP2.66□□□□□ -1.98
CHD9-220ENST00000569794 SETXQ7Z333 2677 aaKnown RBP2.66□□□□□ -1.98
CHD9-220ENST00000569794 COL14A1Q05707 1796 aaKnown RBP2.66□□□□□ -1.98
CHD9-220ENST00000569794 ARHGEF5Q12774 1597 aa2.66□□□□□ -1.98
CHD9-220ENST00000569794 CCDC18Q5T9S5 1454 aa2.65□□□□□ -1.98
CHD9-220ENST00000569794 UBL3O95164 117 aa2.65□□□□□ -1.99
CHD9-220ENST00000569794 HRES1P13985 223 aa2.65□□□□□ -1.99
CHD9-220ENST00000569794 Q56UQ5 140 aa2.65□□□□□ -1.99
CHD9-220ENST00000569794 ZNF826PQ6ZT77 177 aa2.65□□□□□ -1.99
CHD9-220ENST00000569794 SVBPQ8N300 66 aa2.65□□□□□ -1.99
CHD9-220ENST00000569794 TMEM254Q8TBM7 123 aa2.65□□□□□ -1.99
CHD9-220ENST00000569794 PSMF1Q92530 271 aa2.65□□□□□ -1.99
CHD9-220ENST00000569794 MUCL1Q96DR8 90 aa2.65□□□□□ -1.99
CHD9-220ENST00000569794 C20orf166-AS1Q96NR2 134 aa2.65□□□□□ -1.99
CHD9-220ENST00000569794 PIK3C2AO00443 1686 aa2.65□□□□□ -1.99
CHD9-220ENST00000569794 CTTNBP2Q8WZ74 1663 aa2.65□□□□□ -1.99
CHD9-220ENST00000569794 CDC42BPGQ6DT37 1551 aa2.65□□□□□ -1.99
CHD9-220ENST00000569794 LRRC37A3O60309 1634 aa2.64□□□□□ -1.99
CHD9-220ENST00000569794 KTN1Q86UP2 1357 aaKnown RBP2.64□□□□□ -1.99
CHD9-220ENST00000569794 M0R2P5 195 aa2.64□□□□□ -1.99
CHD9-220ENST00000569794 GEMIN2O14893 280 aaKnown RBP2.64□□□□□ -1.99
CHD9-220ENST00000569794 PLXNB1O43157 2135 aa2.64□□□□□ -1.99
CHD9-220ENST00000569794 HYPMO75409 117 aa2.64□□□□□ -1.99
CHD9-220ENST00000569794 TNFP01375 233 aa2.64□□□□□ -1.99
CHD9-220ENST00000569794 SSR2P43308 183 aa2.64□□□□□ -1.99
CHD9-220ENST00000569794 COL5A1-AS1Q5SY13 56 aa2.64□□□□□ -1.99
CHD9-220ENST00000569794 SMIM7Q9BQ49 75 aa2.64□□□□□ -1.99
CHD9-220ENST00000569794 NOP16Q9Y3C1 178 aaKnown RBP2.64□□□□□ -1.99
CHD9-220ENST00000569794 XRN1Q8IZH2 1706 aaKnown RBP2.64□□□□□ -1.99
CHD9-220ENST00000569794 LRRIQ1Q96JM4 1722 aa2.64□□□□□ -1.99
CHD9-220ENST00000569794 FER1L6Q2WGJ9 1857 aa2.64□□□□□ -1.99
CHD9-220ENST00000569794 BDP1A6H8Y1 2624 aa2.64□□□□□ -1.99
CHD9-220ENST00000569794 RANBP2P49792 3224 aaKnown RBP2.64□□□□□ -1.99
CHD9-220ENST00000569794 MYH11P35749 1972 aa2.63□□□□□ -1.99
CHD9-220ENST00000569794 TNRC6CQ9HCJ0 1690 aaKnown RBP2.63□□□□□ -1.99
CHD9-220ENST00000569794 IGLV2-18A0A075B6J9 118 aa2.63□□□□□ -1.99
CHD9-220ENST00000569794 A0A1W2PNM2 257 aa2.63□□□□□ -1.99
CHD9-220ENST00000569794 ODF3BA8MYP8 253 aa2.63□□□□□ -1.99
CHD9-220ENST00000569794 C5orf67F2Z3F1 127 aa2.63□□□□□ -1.99
CHD9-220ENST00000569794 APOC4-APOC2K7ER74 178 aa2.63□□□□□ -1.99
CHD9-220ENST00000569794 EDF1O60869 148 aaKnown RBP2.63□□□□□ -1.99
CHD9-220ENST00000569794 APOC2P02655 101 aa2.63□□□□□ -1.99
CHD9-220ENST00000569794 CTSGP08311 255 aa2.63□□□□□ -1.99
CHD9-220ENST00000569794 SPINK8P0C7L1 97 aa2.63□□□□□ -1.99
CHD9-220ENST00000569794 ASAH2BP0C7U1 165 aa2.63□□□□□ -1.99
CHD9-220ENST00000569794 IFITM1P13164 125 aa2.63□□□□□ -1.99
CHD9-220ENST00000569794 C9orf153Q5TBE3 101 aa2.63□□□□□ -1.99
CHD9-220ENST00000569794 Q8N2B8 174 aa2.63□□□□□ -1.99
CHD9-220ENST00000569794 CMTM2Q8TAZ6 248 aa2.63□□□□□ -1.99
Retrieved 100 of 20,778 RNA–protein pairs in 126 ms