RNA–Protein interactions for RNA: ENST00000569575.5

RAB40C-212, Transcript of RAB40C, member RAS oncogene family, humanhuman

TSL 2

Gene RAB40C, Length 692 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40C-212ENST00000569575 SEC11CQ9BY50 192 aa16.93■□□□□ 0.3
RAB40C-212ENST00000569575 XKRY2A2RUG3 117 aa16.92■□□□□ 0.3
RAB40C-212ENST00000569575 ORM1P02763 201 aa16.92■□□□□ 0.3
RAB40C-212ENST00000569575 RPS20P60866 119 aaKnown RBP16.92■□□□□ 0.3
RAB40C-212ENST00000569575 PRR27Q6MZM9 219 aa16.92■□□□□ 0.3
RAB40C-212ENST00000569575 RNASE8Q8TDE3 154 aaKnown RBP16.92■□□□□ 0.3
RAB40C-212ENST00000569575 ZNF705GA8MUZ8 300 aaPredicted RBP16.91■□□□□ 0.3
RAB40C-212ENST00000569575 P01737 135 aa16.91■□□□□ 0.3
RAB40C-212ENST00000569575 RETNQ9HD89 108 aa16.91■□□□□ 0.3
RAB40C-212ENST00000569575 U3KQK5 164 aa16.91■□□□□ 0.3
RAB40C-212ENST00000569575 PGPEP1LA6NFU8 196 aa16.9■□□□□ 0.3
RAB40C-212ENST00000569575 B4DEV8 164 aa16.9■□□□□ 0.3
RAB40C-212ENST00000569575 KRBOX1C9JBD0 128 aa16.9■□□□□ 0.3
RAB40C-212ENST00000569575 HTN1P15515 57 aa16.9■□□□□ 0.3
RAB40C-212ENST00000569575 ZNF415Q09FC8 603 aa16.9■□□□□ 0.3
RAB40C-212ENST00000569575 MUC21Q5SSG8 566 aa16.9■□□□□ 0.3
RAB40C-212ENST00000569575 SPXQ9BT56 116 aa16.9■□□□□ 0.3
RAB40C-212ENST00000569575 NAGKQ9UJ70 344 aa16.9■□□□□ 0.3
RAB40C-212ENST00000569575 IGKV3D-20A0A0C4DH25 116 aa16.89■□□□□ 0.29
RAB40C-212ENST00000569575 IGHV4-28A0A0C4DH34 117 aa16.89■□□□□ 0.29
RAB40C-212ENST00000569575 F8W036 122 aa16.89■□□□□ 0.29
RAB40C-212ENST00000569575 K7EN84 100 aa16.89■□□□□ 0.29
RAB40C-212ENST00000569575 RPL23P62829 140 aaKnown RBP16.89■□□□□ 0.29
RAB40C-212ENST00000569575 DAZ2Q13117 558 aaKnown RBP16.89■□□□□ 0.29
RAB40C-212ENST00000569575 OSTCQ9NRP0 149 aa16.89■□□□□ 0.29
RAB40C-212ENST00000569575 C11orf21Q9P2W6 132 aa16.89■□□□□ 0.29
RAB40C-212ENST00000569575 SNURFLB1AK76 121 aa16.88■□□□□ 0.29
RAB40C-212ENST00000569575 CT83Q5H943 113 aa16.88■□□□□ 0.29
RAB40C-212ENST00000569575 Q6ZQT7 251 aa16.88■□□□□ 0.29
RAB40C-212ENST00000569575 C15orf54Q8N8G6 183 aa16.88■□□□□ 0.29
RAB40C-212ENST00000569575 NUDT10Q8NFP7 164 aa16.88■□□□□ 0.29
RAB40C-212ENST00000569575 NUDT11Q96G61 164 aa16.88■□□□□ 0.29
RAB40C-212ENST00000569575 TIMM8BQ9Y5J9 83 aaPredicted RBP16.88■□□□□ 0.29
RAB40C-212ENST00000569575 LYRM9A8MSI8 78 aa16.87■□□□□ 0.29
RAB40C-212ENST00000569575 TYMSP04818 313 aa16.87■□□□□ 0.29
RAB40C-212ENST00000569575 MED14OSP0DP75 135 aa16.87■□□□□ 0.29
RAB40C-212ENST00000569575 TCL1AP56279 114 aa16.87■□□□□ 0.29
RAB40C-212ENST00000569575 ERVFC1-1P60608 527 aa16.87■□□□□ 0.29
RAB40C-212ENST00000569575 OR5I1Q13606 314 aa16.87■□□□□ 0.29
RAB40C-212ENST00000569575 C10orf91Q5T1B1 145 aa16.87■□□□□ 0.29
RAB40C-212ENST00000569575 ISOC2Q96AB3 205 aa16.87■□□□□ 0.29
RAB40C-212ENST00000569575 NDUFAF3Q9BU61 184 aa16.87■□□□□ 0.29
RAB40C-212ENST00000569575 AZU1P20160 251 aa16.86■□□□□ 0.29
RAB40C-212ENST00000569575 ASIPP42127 132 aa16.86■□□□□ 0.29
RAB40C-212ENST00000569575 LGALS9BQ3B8N2 356 aa16.86■□□□□ 0.29
RAB40C-212ENST00000569575 C11orf72Q8NBR9 251 aa16.86■□□□□ 0.29
RAB40C-212ENST00000569575 PTH2Q96A98 100 aa16.86■□□□□ 0.29
RAB40C-212ENST00000569575 IL36BQ9NZH7 164 aa16.86■□□□□ 0.29
RAB40C-212ENST00000569575 NBEAL2Q6ZNJ1 2754 aa16.86■□□□□ 0.29
RAB40C-212ENST00000569575 IGHV3-16A0A0C4DH30 117 aa16.85■□□□□ 0.29
RAB40C-212ENST00000569575 SPART-AS1P0CW21 52 aa16.85■□□□□ 0.29
RAB40C-212ENST00000569575 ADIRFQ15847 76 aa16.85■□□□□ 0.29
RAB40C-212ENST00000569575 RPP21Q9H633 154 aaKnown RBP16.85■□□□□ 0.29
RAB40C-212ENST00000569575 PLAC8L1A1L4L8 177 aa16.84■□□□□ 0.29
RAB40C-212ENST00000569575 GNRH2O43555 120 aa16.84■□□□□ 0.29
RAB40C-212ENST00000569575 S100A4P26447 101 aaKnown RBP16.84■□□□□ 0.29
RAB40C-212ENST00000569575 PIK3CD-AS1Q5SR53 167 aa16.84■□□□□ 0.29
RAB40C-212ENST00000569575 OR2D3Q8NGH3 330 aa16.84■□□□□ 0.29
RAB40C-212ENST00000569575 SFRP2Q96HF1 295 aa16.84■□□□□ 0.29
RAB40C-212ENST00000569575 CARHSP1Q9Y2V2 147 aaKnown RBP16.84■□□□□ 0.29
RAB40C-212ENST00000569575 FAM231BA6NCW3 169 aa16.83■□□□□ 0.28
RAB40C-212ENST00000569575 A8MWL6 223 aa16.83■□□□□ 0.28
RAB40C-212ENST00000569575 M0R036 132 aa16.83■□□□□ 0.28
RAB40C-212ENST00000569575 PPP1R2P9O14990 202 aa16.83■□□□□ 0.28
RAB40C-212ENST00000569575 GATCO43716 136 aaKnown RBP16.83■□□□□ 0.28
RAB40C-212ENST00000569575 IL17DQ8TAD2 202 aa16.83■□□□□ 0.28
RAB40C-212ENST00000569575 GSN-AS1Q9NRJ2 163 aa16.83■□□□□ 0.28
RAB40C-212ENST00000569575 A0A1W2PPQ1 181 aa16.82■□□□□ 0.28
RAB40C-212ENST00000569575 OR10G8Q8NGN5 311 aa16.82■□□□□ 0.28
RAB40C-212ENST00000569575 RNASE7Q9H1E1 156 aaKnown RBP16.82■□□□□ 0.28
RAB40C-212ENST00000569575 A0A0J9YWU9 116 aa16.81■□□□□ 0.28
RAB40C-212ENST00000569575 F2Z2F3 143 aa16.81■□□□□ 0.28
RAB40C-212ENST00000569575 ADCYAP1P18509 176 aa16.81■□□□□ 0.28
RAB40C-212ENST00000569575 C9orf85Q96MD7 179 aa16.81■□□□□ 0.28
RAB40C-212ENST00000569575 SSBP4Q9BWG4 385 aaPredicted RBP16.81■□□□□ 0.28
RAB40C-212ENST00000569575 GFRA4Q9GZZ7 299 aa16.81■□□□□ 0.28
RAB40C-212ENST00000569575 MDFICQ9P1T7 246 aa16.81■□□□□ 0.28
RAB40C-212ENST00000569575 DKK2Q9UBU2 259 aa16.81■□□□□ 0.28
RAB40C-212ENST00000569575 CXorf65A6NEN9 183 aa16.8■□□□□ 0.28
RAB40C-212ENST00000569575 M0R2P5 195 aa16.8■□□□□ 0.28
RAB40C-212ENST00000569575 MT-ND4LP03901 98 aa16.8■□□□□ 0.28
RAB40C-212ENST00000569575 PRM2P04554 102 aa16.8■□□□□ 0.28
RAB40C-212ENST00000569575 OR5AL1P0C617 328 aa16.8■□□□□ 0.28
RAB40C-212ENST00000569575 ANAPC16Q96DE5 110 aa16.8■□□□□ 0.28
RAB40C-212ENST00000569575 C18orf15Q96N68 181 aa16.8■□□□□ 0.28
RAB40C-212ENST00000569575 SPINK4O60575 86 aa16.79■□□□□ 0.28
RAB40C-212ENST00000569575 RNASE3P12724 160 aaKnown RBP16.79■□□□□ 0.28
RAB40C-212ENST00000569575 ZNF575Q86XF7 245 aa16.79■□□□□ 0.28
RAB40C-212ENST00000569575 RASL10AQ92737 203 aa16.79■□□□□ 0.28
RAB40C-212ENST00000569575 EDA2RQ9HAV5 297 aa16.79■□□□□ 0.28
RAB40C-212ENST00000569575 NOP10Q9NPE3 64 aaKnown RBP16.79■□□□□ 0.28
RAB40C-212ENST00000569575 SCRT2Q9NQ03 307 aa16.79■□□□□ 0.28
RAB40C-212ENST00000569575 EMP1P54849 157 aa16.78■□□□□ 0.28
RAB40C-212ENST00000569575 FOXA3P55318 350 aaPredicted RBP16.78■□□□□ 0.28
RAB40C-212ENST00000569575 WDR73Q6P4I2 378 aa16.78■□□□□ 0.28
RAB40C-212ENST00000569575 LINC00612Q8N6U2 182 aa16.78■□□□□ 0.28
RAB40C-212ENST00000569575 SNAI2O43623 268 aa16.77■□□□□ 0.28
RAB40C-212ENST00000569575 ARMS2P0C7Q2 107 aa16.77■□□□□ 0.28
RAB40C-212ENST00000569575 RPL19P84098 196 aaKnown RBP16.77■□□□□ 0.28
RAB40C-212ENST00000569575 FAM222AQ5U5X8 452 aa16.77■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 72.2 ms